mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.33.1
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Predicted mutations | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | REL606‑5 | 2,345 | IS150 (+) +3 bp | intergenic (‑30/‑209) | yafC ← / → yafD | predicted DNA‑binding transcriptional regulator/hypothetical protein |
| JC JC | REL606‑5 | 4,000 | IS150 (–) +3 bp | intergenic (+17/+29) | yafE → / ← mltD | predicted S‑adenosyl‑L‑methionine‑dependent methyltransferase/predicted membrane‑bound lytic murein transglycosylase D |
| JC JC | REL606‑5 | 4,400 | IS150 (+) +3 bp | coding (988‑990/1359 nt) | mltD ← | predicted membrane‑bound lytic murein transglycosylase D |
| JC JC | REL606‑5 | 38,000 | IS1 (–) +6 bp | coding (1624‑1629/2199 nt) | yagR ← | predicted oxidoreductase with molybdenum‑binding domain |
| JC JC | REL606‑5 | 42,000 | IS1 (+) +6 bp | coding (317‑322/615 nt) | yagU → | conserved inner membrane protein |
| Unassigned missing coverage evidence | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | REL606‑5 | 1 | 13 | 13 | NA [0] | [9] 12 | –/rrfH | –/5S ribosomal RNA |
| * | * | ÷ | REL606‑5 | 46287 | 46298 | 12 | 13 [11] | [0] NA | yagX | predicted aromatic compound dioxygenase |