|
| position |
mutation |
annotation |
gene |
description |
| 2 |
C→G |
E20H (GAA→CAC) |
chlR CDS ← |
|
| 59 |
T→G |
M1M (ATG→CTG) † |
chlR CDS ← |
|
| 63 |
A→C |
intergenic (‑4/+614) |
chlR CDS ← / ← ndmB extra CDS |
–/– |
| 116 |
A→T |
intergenic (‑57/+561) |
chlR CDS ← / ← ndmB extra CDS |
–/– |
| 183 |
T→G |
intergenic (‑124/+494) |
chlR CDS ← / ← ndmB extra CDS |
–/– |
| 239 |
+GCTCTTGGCAA |
intergenic (‑180/+438) |
chlR CDS ← / ← ndmB extra CDS |
–/– |
| 248 |
A→G |
intergenic (‑189/+429) |
chlR CDS ← / ← ndmB extra CDS |
–/– |
| 339 |
T→A |
intergenic (‑280/+338) |
chlR CDS ← / ← ndmB extra CDS |
–/– |
| 515 |
Δ2 bp |
intergenic (‑456/+161) |
chlR CDS ← / ← ndmB extra CDS |
–/– |
| 658 |
+CAGATC |
intergenic (‑599/+19) |
chlR CDS ← / ← ndmB extra CDS |
–/– |
| position |
mutation |
annotation |
gene |
description |
| 758 |
C→G |
L448F (TTG→TTC) |
ndmB extra CDS ← |
|
| 856 |
G→A |
R416* (CGA→TGA) |
ndmB extra CDS ← |
|
| 871 |
+GTGTTCGGGACTTCGG |
coding (163/357 nt) |
ndmB extra CDS ← |
|
| 930 |
T→G |
H391P (CAT→CCT) |
ndmB extra CDS ← |
|
| 1,007 |
C→G |
E365D (GAG→GAC) |
ndmB extra CDS ← |
|
| 1,082 |
Δ15 bp |
intergenic (‑49/+323) |
ndmB extra CDS ← / ← putative gene |
–/– |
| 1,106 |
+CAATTGAC |
intergenic (‑73/+313) |
ndmB extra CDS ← / ← putative gene |
–/– |
| 1,127 |
G→C |
intergenic (‑94/+292) |
ndmB extra CDS ← / ← putative gene |
–/– |
| 1,292 |
Δ5 bp |
intergenic (‑259/+123) |
ndmB extra CDS ← / ← putative gene |
–/– |
| 1,421 |
A→T |
*64K (TAG→AAG) º |
putative gene ← |
|
| position |
mutation |
annotation |
gene |
description |
| 1,525 |
+TGGAGACACAA |
coding (84/190 nt) |
putative gene ← |
|
| 1,585 |
A→T |
L9Q (CTG→CAG) º |
putative gene ← |
|
| 1,657 |
A→C |
intergenic (‑49/‑221) |
putative gene ← / → ndmA CDS |
–/– |
| 1,736 |
T→C |
intergenic (‑128/‑142) |
putative gene ← / → ndmA CDS |
–/– |
| 1,738 |
+AGCCGGCCACA |
intergenic (‑130/‑140) |
putative gene ← / → ndmA CDS |
–/– |
| 2,051 |
Δ10 bp |
coding (174‑183/756 nt) |
ndmA CDS → |
|
| 2,113 |
Δ12 bp |
coding (236‑247/756 nt) |
ndmA CDS → |
|
| 2,243 |
+CGCC |
coding (366/756 nt) |
ndmA CDS → |
|
| 2,354 |
Δ11 bp |
coding (477‑487/756 nt) |
ndmA CDS → |
|
| 2,360 |
A→G |
K161K (AAA→AAG) º |
ndmA CDS → |
|
| position |
mutation |
annotation |
gene |
description |
| 2,361 |
A→C |
N162H (AAC→CAC) º |
ndmA CDS → |
|
| 2,477 |
Δ9 bp |
coding (600‑608/756 nt) |
ndmA CDS → |
|
| 2,727 |
Δ1 bp |
coding (69/1068 nt) |
ndmB extra CDS → |
|
| 2,743 |
+GCCC |
coding (85/1068 nt) |
ndmB extra CDS → |
|
| 2,773 |
A→T |
M39L (ATG→TTG) |
ndmB extra CDS → |
|
| 3,104 |
Δ6 bp |
coding (446‑451/1068 nt) |
ndmB extra CDS → |
|
| 3,148 |
+GCCTCTACC |
coding (490/1068 nt) |
ndmB extra CDS → |
|
| 3,163 |
C→G |
R169G (CGG→GGG) |
ndmB extra CDS → |
|
| 3,233 |
+GCGCTCGCCATTTTGGT |
coding (575/1068 nt) |
ndmB extra CDS → |
|
| 3,255 |
T→G |
V199V (GTT→GTG) |
ndmB extra CDS → |
|
| position |
mutation |
annotation |
gene |
description |
| 3,281 |
Δ2 bp |
coding (623‑624/1068 nt) |
ndmB extra CDS → |
|
| 3,448 |
A→T |
N264Y (AAC→TAC) |
ndmB extra CDS → |
|
| 3,490 |
+TAGTTGAGGTTCCATAAC |
coding (832/1068 nt) |
ndmB extra CDS → |
|
| 3,640 |
C→G |
H328D (CAT→GAT) |
ndmB extra CDS → |
|
| 3,835 |
+GTCATGGGCA |
coding (74/332 nt) |
ndmC CDS → |
|
| 4,174 |
A→C |
N168T (AAC→ACC) |
ndmC CDS → |
|
| 4,417 |
A→T |
D249V (GAC→GTC) |
ndmC CDS → |
|
| 4,418 |
C→C |
D249V (GAC→GTC) |
ndmC CDS → |
|
| 4,540 |
Δ17 bp |
coding (537‑553/613 nt) |
ndmC CDS → |
|
| 4,664 |
A→T |
Q8L (CAG→CTG) |
ndmD CDS → |
|
| position |
mutation |
annotation |
gene |
description |
| 4,743 |
C→A |
A34A (GCC→GCA) |
ndmD CDS → |
|
| 4,861 |
T→C |
W74R (TGG→CGG) |
ndmD CDS → |
|
| 5,063 |
+GCCTTTCGGCTCCC |
coding (422/1767 nt) |
ndmD CDS → |
|
| 5,158 |
Δ13 bp |
coding (517‑529/1767 nt) |
ndmD CDS → |
|
| 5,170 |
T→G |
L177V (TTG→GTG) |
ndmD CDS → |
|
| 5,269 |
Δ19 bp |
coding (628‑646/1767 nt) |
ndmD CDS → |
|
| 5,665 |
A→C |
I342L (ATT→CTT) |
ndmD CDS → |
|
| 5,726 |
Δ19 bp |
coding (1085‑1103/1767 nt) |
ndmD CDS → |
|
| 5,726 |
A→T |
K362I (AAA→ATA) |
ndmD CDS → |
|
| 5,810 |
Δ1 bp |
coding (1169/1767 nt) |
ndmD CDS → |
|
| position |
mutation |
annotation |
gene |
description |
| 5,827 |
+TAA |
coding (1186/1767 nt) |
ndmD CDS → |
|
| 5,872 |
G→C |
A411P (GCT→CCT) |
ndmD CDS → |
|
| 6,163 |
+GTTTTCGCCCTA |
coding (1522/1767 nt) |
ndmD CDS → |
|
| 6,208 |
T→A |
L523M (TTG→ATG) |
ndmD CDS → |
|
| 6,278 |
Δ19 bp |
coding (1637‑1655/1767 nt) |
ndmD CDS → |
|
| 6,430 |
+TTGC |
intergenic (+22/‑41) |
ndmD CDS → / → gst9 CDS |
–/– |
| 6,702 |
T→G |
Y78D (TAC→GAC) |
gst9 CDS → |
|
| 6,975 |
+GTTCCGCCTTAG |
coding (505/645 nt) |
gst9 CDS → |
|
| 7,017 |
Δ20 bp |
coding (547‑566/645 nt) |
gst9 CDS → |
|
| 7,174 |
C→A |
intergenic (+59/+1128) |
gst9 CDS → / ← chlR CDS |
–/– |
| position |
mutation |
annotation |
gene |
description |
| 7,353 |
Δ10 bp |
intergenic (+238/+940) |
gst9 CDS → / ← chlR CDS |
–/– |
| 7,368 |
A→C |
intergenic (+253/+934) |
gst9 CDS → / ← chlR CDS |
–/– |
| 7,447 |
C→T |
intergenic (+332/+855) |
gst9 CDS → / ← chlR CDS |
–/– |
| 7,520 |
A→C |
intergenic (+405/+782) |
gst9 CDS → / ← chlR CDS |
–/– |
| 7,656 |
G→C |
intergenic (+541/+646) |
gst9 CDS → / ← chlR CDS |
–/– |
| 7,815 |
Δ1 bp |
intergenic (+700/+487) |
gst9 CDS → / ← chlR CDS |
–/– |
| 7,895 |
C→A |
intergenic (+780/+407) |
gst9 CDS → / ← chlR CDS |
–/– |
| 7,968 |
C→A |
intergenic (+853/+334) |
gst9 CDS → / ← chlR CDS |
–/– |
| 8,037 |
C→A |
intergenic (+922/+265) |
gst9 CDS → / ← chlR CDS |
–/– |
| 8,110 |
A→G |
intergenic (+995/+192) |
gst9 CDS → / ← chlR CDS |
–/– |
| position |
mutation |
annotation |
gene |
description |
| 8,244 |
+GTACGCTCTTAA |
intergenic (+1129/+58) |
gst9 CDS → / ← chlR CDS |
–/– |
| 8,301 |
A→C |
intergenic (+1186/+1) |
gst9 CDS → / ← chlR CDS |
–/– |
| 8,346 |
Δ1 bp |
coding (575/619 nt) |
chlR CDS ← |
|
| 8,395 |
+GGGGAGGACTCACTCACTAC |
coding (526/619 nt) |
chlR CDS ← |
|
| 8,419 |
C→A |
L187L (CTG→CTT) |
chlR CDS ← |
|
| 8,476 |
G→T |
A168A (GCC→GCA) |
chlR CDS ← |
|
| 8,503 |
+ACCTCGCTGTTCTT |
coding (418/619 nt) |
chlR CDS ← |
|
| 8,577 |
G→A |
P135S (CCT→TCT) |
chlR CDS ← |
|
| 8,648 |
T→A |
D111V (GAC→GTC) |
chlR CDS ← |
|
| 8,920 |
T→G |
E20H (GAA→CAC) |
chlR CDS ← |
|