Index of /debian/breseq/breseq-0.33.1/extern/samtools-1.3.1/


../
examples/                                          02-Aug-2018 17:03                   -
htslib-1.3.1/                                      21-Nov-2018 11:59                   -
misc/                                              02-Aug-2018 17:03                   -
test/                                              02-Aug-2018 17:03                   -
win32/                                             02-Aug-2018 17:03                   -
AUTHORS                                            02-Aug-2018 17:03                 828
ChangeLog.old                                      02-Aug-2018 17:03              116368
INSTALL                                            02-Aug-2018 17:03                5359
LICENSE                                            02-Aug-2018 17:03                1706
Makefile.am                                        02-Aug-2018 17:03               11882
Makefile.mingw                                     02-Aug-2018 17:03                2092
Makefile.original                                  02-Aug-2018 17:03               14541
Makefile.xcode                                     02-Aug-2018 17:03               14562
NEWS                                               02-Aug-2018 17:03               35527
README                                             02-Aug-2018 17:03                2138
aclocal.m4                                         02-Aug-2018 17:03               30114
bam.c                                              02-Aug-2018 17:03                8829
bam.h                                              02-Aug-2018 17:03               20987
bam2bcf.c                                          02-Aug-2018 17:03               31529
bam2bcf.h                                          02-Aug-2018 17:03                5126
bam2bcf_indel.c                                    02-Aug-2018 17:03               24020
bam2depth.c                                        02-Aug-2018 17:03               12735
bam_addrprg.c                                      02-Aug-2018 17:03               14482
bam_aux.c                                          02-Aug-2018 17:03                2769
bam_cat.c                                          02-Aug-2018 17:03               17910
bam_color.c                                        02-Aug-2018 17:03                4951
bam_endian.h                                       02-Aug-2018 17:03                2273
bam_flags.c                                        02-Aug-2018 17:03                3150
bam_import.c                                       02-Aug-2018 17:03                2325
bam_index.c                                        02-Aug-2018 17:03                4062
bam_lpileup.c                                      02-Aug-2018 17:03                6950
bam_lpileup.h                                      02-Aug-2018 17:03                2058
bam_mate.c                                         02-Aug-2018 17:03               14929
bam_md.c                                           02-Aug-2018 17:03               18388
bam_plbuf.c                                        02-Aug-2018 17:03                2110
bam_plbuf.h                                        02-Aug-2018 17:03                1842
bam_plcmd.c                                        02-Aug-2018 17:03               44538
bam_quickcheck.c                                   02-Aug-2018 17:03                5024
bam_reheader.c                                     02-Aug-2018 17:03               16061
bam_rmdup.c                                        02-Aug-2018 17:03               10497
bam_rmdupse.c                                      02-Aug-2018 17:03                7293
bam_sort.c                                         02-Aug-2018 17:03               69208
bam_split.c                                        02-Aug-2018 17:03               20083
bam_stat.c                                         02-Aug-2018 17:03                7400
bam_tview.c                                        02-Aug-2018 17:03               16477
bam_tview.h                                        02-Aug-2018 17:03                3421
bam_tview_curses.c                                 02-Aug-2018 17:03               11520
bam_tview_html.c                                   02-Aug-2018 17:03               10898
bamshuf.c                                          02-Aug-2018 17:03                9010
bamtk.c                                            02-Aug-2018 17:03                9406
bedcov.c                                           02-Aug-2018 17:03                5912
bedidx.c                                           02-Aug-2018 17:03                8696
config.h                                           02-Aug-2018 17:03                  85
config.h.in                                        02-Aug-2018 17:03                1542
config.mk                                          02-Aug-2018 17:03                1694
config.mk.in                                       02-Aug-2018 17:03                1991
configure                                          02-Aug-2018 17:03              154718
configure.ac                                       02-Aug-2018 17:03                3968
cut_target.c                                       02-Aug-2018 17:03                8523
dict.c                                             02-Aug-2018 17:03                5130
errmod.c                                           02-Aug-2018 17:03                6495
errmod.h                                           02-Aug-2018 17:03                1656
faidx.c                                            02-Aug-2018 17:03                2800
install-sh                                         02-Aug-2018 17:03               14675
kprobaln.c                                         02-Aug-2018 17:03               10699
kprobaln.h                                         02-Aug-2018 17:03                1567
padding.c                                          02-Aug-2018 17:03               25794
phase.c                                            02-Aug-2018 17:03               28297
sam.c                                              02-Aug-2018 17:03                4908
sam.h                                              02-Aug-2018 17:03                5317
sam_header.c                                       02-Aug-2018 17:03               22580
sam_header.h                                       02-Aug-2018 17:03                2796
sam_opts.c                                         02-Aug-2018 17:03                5711
sam_opts.h                                         02-Aug-2018 17:03                3879
sam_view.c                                         02-Aug-2018 17:03               37136
sample.c                                           02-Aug-2018 17:03                4540
sample.h                                           02-Aug-2018 17:03                1560
samtools.1                                         02-Aug-2018 17:03               54835
samtools.h                                         02-Aug-2018 17:03                1581
stats.c                                            02-Aug-2018 17:03               70232
stats_isize.c                                      02-Aug-2018 17:03                7608
stats_isize.h                                      02-Aug-2018 17:03                2484