Index of /debian/breseq/breseq-0.37.1/extern/samtools-1.3.1/
../
examples/ 21-Sep-2022 13:06 -
htslib-1.3.1/ 28-Sep-2022 07:00 -
misc/ 21-Sep-2022 13:06 -
win32/ 21-Sep-2022 13:06 -
AUTHORS 28-May-2014 15:49 828
ChangeLog.old 09-Mar-2012 02:47 116368
INSTALL 15-Dec-2015 16:00 5359
LICENSE 26-Jun-2014 13:16 1706
Makefile 28-Sep-2022 07:00 32131
Makefile.am 01-Feb-2020 14:57 2514
Makefile.in 28-Sep-2022 06:59 33704
Makefile.mingw 07-Jul-2011 03:37 2092
Makefile.original 22-Apr-2016 09:51 14541
NEWS 22-Apr-2016 08:57 35527
README 22-Apr-2016 08:57 2138
aclocal.m4 22-Apr-2016 09:51 30114
bam.c 15-Jul-2015 13:02 8829
bam.h 22-Apr-2016 08:57 20987
bam.lo 28-Sep-2022 07:00 276
bam.o 28-Sep-2022 07:00 29760
bam2bcf.c 28-Jan-2016 10:56 31529
bam2bcf.h 05-Aug-2015 13:47 5126
bam2bcf.lo 28-Sep-2022 07:00 288
bam2bcf.o 28-Sep-2022 07:00 92728
bam2bcf_indel.c 28-Jan-2016 10:56 24020
bam2bcf_indel.lo 28-Sep-2022 07:00 306
bam2bcf_indel.o 28-Sep-2022 07:00 94896
bam2depth.c 28-Jan-2016 10:56 12735
bam2depth.lo 28-Sep-2022 07:00 294
bam2depth.o 28-Sep-2022 07:00 53456
bam_addrprg.c 28-Jan-2016 10:56 14482
bam_addrprg.lo 28-Sep-2022 07:00 300
bam_addrprg.o 28-Sep-2022 07:00 66632
bam_aux.c 28-Jan-2016 10:56 2769
bam_aux.lo 28-Sep-2022 07:00 288
bam_aux.o 28-Sep-2022 07:00 12496
bam_cat.c 14-Apr-2016 13:44 17910
bam_cat.lo 28-Sep-2022 07:00 288
bam_cat.o 28-Sep-2022 07:00 72704
bam_color.c 28-Jan-2016 10:56 4951
bam_color.lo 28-Sep-2022 07:00 294
bam_color.o 28-Sep-2022 07:00 14080
bam_endian.h 01-Aug-2014 14:48 2273
bam_flags.c 28-Jan-2016 10:56 3150
bam_flags.lo 28-Sep-2022 07:00 294
bam_flags.o 28-Sep-2022 07:00 18784
bam_import.c 22-Oct-2016 00:37 2325
bam_import.lo 28-Sep-2022 07:00 297
bam_import.o 28-Sep-2022 07:00 19104
bam_index.c 28-Jan-2016 10:56 4062
bam_index.lo 28-Sep-2022 07:00 294
bam_index.o 28-Sep-2022 07:00 22952
bam_lpileup.c 28-Jan-2016 10:56 6950
bam_lpileup.h 01-Aug-2014 14:48 2058
bam_lpileup.lo 28-Sep-2022 07:00 300
bam_lpileup.o 28-Sep-2022 07:00 42856
bam_mate.c 14-Apr-2016 13:44 14929
bam_mate.lo 28-Sep-2022 07:00 291
bam_mate.o 28-Sep-2022 07:00 56400
bam_md.c 23-Mar-2016 15:23 18388
bam_md.lo 28-Sep-2022 07:00 285
bam_md.o 28-Sep-2022 07:00 78280
bam_plbuf.c 28-Jan-2016 10:56 2110
bam_plbuf.h 01-Aug-2014 14:48 1842
bam_plbuf.lo 28-Sep-2022 07:00 294
bam_plbuf.o 28-Sep-2022 07:00 9728
bam_plcmd.c 05-Feb-2016 17:26 44538
bam_plcmd.lo 28-Sep-2022 07:00 294
bam_plcmd.o 28-Sep-2022 07:00 158864
bam_quickcheck.c 22-Feb-2016 16:16 5024
bam_quickcheck.lo 28-Sep-2022 07:00 309
bam_quickcheck.o 28-Sep-2022 07:00 26008
bam_reheader.c 14-Apr-2016 13:44 16061
bam_reheader.lo 28-Sep-2022 07:00 303
bam_reheader.o 28-Sep-2022 07:00 64704
bam_rmdup.c 06-Apr-2016 09:43 10497
bam_rmdup.lo 28-Sep-2022 07:00 294
bam_rmdup.o 28-Sep-2022 07:00 80992
bam_rmdupse.c 06-Apr-2016 09:43 7293
bam_rmdupse.lo 28-Sep-2022 07:00 300
bam_rmdupse.o 28-Sep-2022 07:00 65312
bam_sort.c 22-Apr-2016 08:07 69208
bam_sort.lo 28-Sep-2022 07:00 291
bam_sort.o 28-Sep-2022 07:00 358288
bam_split.c 14-Apr-2016 13:55 20083
bam_split.lo 28-Sep-2022 07:00 294
bam_split.o 28-Sep-2022 07:00 105152
bam_stat.c 28-Jan-2016 10:56 7400
bam_stat.lo 28-Sep-2022 07:00 291
bam_stat.o 28-Sep-2022 07:00 42040
bam_tview.c 28-Jan-2016 10:56 16477
bam_tview.h 24-Aug-2015 16:24 3421
bam_tview.lo 28-Sep-2022 07:00 294
bam_tview.o 28-Sep-2022 07:00 76440
bam_tview_curses.c 14-Dec-2015 14:44 11520
bam_tview_html.c 28-Jan-2016 10:56 10898
bam_tview_html.lo 28-Sep-2022 07:00 309
bam_tview_html.o 28-Sep-2022 07:00 47288
bamshuf.c 14-Apr-2016 13:44 9010
bamshuf.lo 28-Sep-2022 07:00 288
bamshuf.o 28-Sep-2022 07:00 74312
bamtk.c 21-Oct-2016 04:09 9406
bamtk.lo 28-Sep-2022 07:00 282
bamtk.o 28-Sep-2022 07:00 13248
bedcov.c 28-Jan-2016 10:56 5912
bedcov.lo 28-Sep-2022 07:00 285
bedcov.o 28-Sep-2022 07:00 41888
bedidx.c 28-Jan-2016 10:56 8696
bedidx.lo 28-Sep-2022 07:00 285
bedidx.o 28-Sep-2022 07:00 61816
config.h 21-Oct-2016 23:16 85
config.h.in 11-Feb-2016 15:54 1542
config.mk 21-Oct-2016 23:16 1694
config.mk.in 14-Dec-2015 14:44 1991
configure 22-Apr-2016 09:51 154718
configure.ac 11-Feb-2016 15:54 3968
cut_target.c 28-Jan-2016 10:56 8523
cut_target.lo 28-Sep-2022 07:00 297
cut_target.o 28-Sep-2022 07:00 40576
dict.c 28-Jan-2016 10:56 5130
dict.lo 28-Sep-2022 07:00 279
dict.o 28-Sep-2022 07:00 41216
errmod.c 28-Jan-2016 10:56 6495
errmod.h 01-Aug-2014 14:48 1656
errmod.lo 28-Sep-2022 07:00 285
errmod.o 28-Sep-2022 07:00 36400
faidx.c 15-Jul-2015 13:02 2800
faidx.lo 28-Sep-2022 07:00 282
faidx.o 28-Sep-2022 07:00 15792
install-sh 14-Dec-2015 14:44 14675
kprobaln.c 28-Jan-2016 10:56 10699
kprobaln.h 27-Jun-2014 14:40 1567
kprobaln.lo 28-Sep-2022 07:00 291
kprobaln.o 28-Sep-2022 07:00 31240
libbam.la 28-Sep-2022 07:00 875
padding.c 14-Apr-2016 13:44 25794
padding.lo 28-Sep-2022 07:00 288
padding.o 28-Sep-2022 07:00 93944
phase.c 14-Apr-2016 13:44 28297
phase.lo 28-Sep-2022 07:00 282
phase.o 28-Sep-2022 07:00 148552
sam.c 06-Apr-2016 09:43 4908
sam.h 09-Mar-2015 11:28 5317
sam.lo 28-Sep-2022 07:00 276
sam.o 28-Sep-2022 07:00 30784
sam_header.c 28-Jan-2016 10:56 22580
sam_header.h 01-Aug-2014 14:48 2796
sam_header.lo 28-Sep-2022 07:00 297
sam_header.o 28-Sep-2022 07:00 94416
sam_opts.c 28-Jan-2016 10:56 5711
sam_opts.h 06-Aug-2015 10:32 3879
sam_opts.lo 28-Sep-2022 07:00 291
sam_opts.o 28-Sep-2022 07:00 23872
sam_view.c 06-Apr-2016 12:22 37136
sam_view.lo 28-Sep-2022 07:00 291
sam_view.o 28-Sep-2022 07:00 165232
sample.c 28-Jan-2016 10:56 4540
sample.h 01-Aug-2014 14:48 1560
sample.lo 28-Sep-2022 07:00 285
sample.o 28-Sep-2022 07:00 42192
samtools.1 22-Apr-2016 08:57 54835
samtools.h 19-Aug-2015 15:25 1581
stats.c 28-Jan-2016 10:56 70232
stats.lo 28-Sep-2022 07:00 282
stats.o 28-Sep-2022 07:00 225704
stats_isize.c 28-Jan-2016 10:56 7608
stats_isize.h 01-Aug-2014 14:48 2484
stats_isize.lo 28-Sep-2022 07:00 300
stats_isize.o 28-Sep-2022 07:00 38760
version.h 28-Sep-2022 07:00 33