data/blimps-3.9+ds/UPDATES:32: accomodate ==> accommodate
data/blimps-3.9+ds/blimps/codehop.h:21: Maxiumum ==> Maximum
data/blimps-3.9+ds/blimps/codehop.h:69: cahr ==> char
data/blimps-3.9+ds/blimps/scoring.h:56: ouputs ==> outputs
data/blimps-3.9+ds/blimps/blimps.c:142: begining ==> beginning
data/blimps-3.9+ds/blimps/blimps.c:237: begining ==> beginning
data/blimps-3.9+ds/blimps/blimps.c:394: begining ==> beginning
data/blimps-3.9+ds/blimps/blimps.c:530: begining ==> beginning
data/blimps-3.9+ds/blimps/blimps.c:582: begining ==> beginning
data/blimps-3.9+ds/blimps/blimps.c:621: begining ==> beginning
data/blimps-3.9+ds/blimps/blimps.c:770: begining ==> beginning
data/blimps-3.9+ds/blimps/blimps.c:889: comand ==> command
data/blimps-3.9+ds/blimps/blimps.c:904: argments ==> arguments
data/blimps-3.9+ds/blimps/blimps.c:1036: outputing ==> outputting
data/blimps-3.9+ds/blimps/blk_to_PSSM.c:249: outout ==> output
data/blimps-3.9+ds/blimps/config.c:52: posible ==> possible
data/blimps-3.9+ds/blimps/config.c:384: sucessfully ==> successfully
data/blimps-3.9+ds/blimps/config.c:720: incase ==> in case
data/blimps-3.9+ds/blimps/convert.c:81: possition ==> position
data/blimps-3.9+ds/blimps/convert.c:682: substition ==> substitution
data/blimps-3.9+ds/blimps/convert.c:1139: occurence ==> occurrence
data/blimps-3.9+ds/blimps/convert.c:1334: occured ==> occurred
data/blimps-3.9+ds/blimps/convert.c:1472: similiarity ==> similarity
data/blimps-3.9+ds/blimps/files.c:75: Retrun ==> Return
data/blimps-3.9+ds/blimps/gcode.c:98: Ser ==> Set
data/blimps-3.9+ds/blimps/gcode.c:156: ACN ==> CAN, ACNE
data/blimps-3.9+ds/blimps/frequency.c:55: sucessfully ==> successfully
data/blimps-3.9+ds/blimps/frequency.c:221: sucessfully ==> successfully
data/blimps-3.9+ds/blimps/makeblockmap.c:473: begining ==> beginning
data/blimps-3.9+ds/blimps/makelis.c:238: ony ==> only
data/blimps-3.9+ds/blimps/makelis.c:371: ony ==> only
data/blimps-3.9+ds/blimps/matrix.c:203: incase ==> in case
data/blimps-3.9+ds/blimps/matrix.c:647: ouput ==> output
data/blimps-3.9+ds/blimps/options.c:125: retreival ==> retrieval
data/blimps-3.9+ds/blimps/options.c:128: retreiving ==> retrieving
data/blimps-3.9+ds/blimps/pattern.c:502: possition ==> position
data/blimps-3.9+ds/blimps/pattern.c:510: possition ==> position
data/blimps-3.9+ds/blimps/scores.c:219: Possition ==> Position
data/blimps-3.9+ds/blimps/scores.c:327: trimed ==> trimmed
data/blimps-3.9+ds/blimps/scores.c:339: trimed ==> trimmed
data/blimps-3.9+ds/blimps/scores.c:352: trimed ==> trimmed
data/blimps-3.9+ds/blimps/scores.c:353: trimed ==> trimmed
data/blimps-3.9+ds/blimps/scores.c:368: trimed ==> trimmed
data/blimps-3.9+ds/blimps/scoring.c:144: calulate ==> calculate
data/blimps-3.9+ds/blimps/scoring.c:464: ouputs ==> outputs
data/blimps-3.9+ds/blimps/sl.c:33: dependance ==> dependence
data/blimps-3.9+ds/blimps/sl.c:37: algorithims ==> algorithms
data/blimps-3.9+ds/blimps/addseqs.c:689: Intialize ==> Initialize
data/blimps-3.9+ds/blimps/biassed_blocks_finder.c:228: occured ==> occurred
data/blimps-3.9+ds/blimps/blalign.c:24: Accomodate ==> Accommodate
data/blimps-3.9+ds/blimps/blalign.c:382: accomodate ==> accommodate
data/blimps-3.9+ds/blimps/blalign.c:430: accomodate ==> accommodate
data/blimps-3.9+ds/blimps/blalign.c:527: bewteen ==> between
data/blimps-3.9+ds/blimps/blalign.c:665: accomodate ==> accommodate
data/blimps-3.9+ds/blimps/blalign.c:844: accomodate ==> accommodate
data/blimps-3.9+ds/blimps/blk2mot.c:3: mot ==> not
data/blimps-3.9+ds/blimps/blk2mot.c:8: mot ==> not
data/blimps-3.9+ds/blimps/blk2mot.c:123: mot ==> not
data/blimps-3.9+ds/blimps/blk2mot.c:351: mot ==> not
data/blimps-3.9+ds/blimps/blk2mot.c:352: mot ==> not
data/blimps-3.9+ds/blimps/blk2mot.c:358: mot ==> not
data/blimps-3.9+ds/blimps/blk2mot.c:359: mot ==> not
data/blimps-3.9+ds/blimps/blk2mot.c:360: mot ==> not
data/blimps-3.9+ds/blimps/blk2mot.c:361: mot ==> not
data/blimps-3.9+ds/blimps/blk2mot.c:362: mot ==> not
data/blimps-3.9+ds/blimps/blk2mot.c:363: mot ==> not
data/blimps-3.9+ds/blimps/blk2mot.c:364: mot ==> not
data/blimps-3.9+ds/blimps/blk2mot.c:365: mot ==> not
data/blimps-3.9+ds/blimps/blk2mot.c:366: mot ==> not
data/blimps-3.9+ds/blimps/blk2mot.c:370: mot ==> not
data/blimps-3.9+ds/blimps/blk2mot.c:372: mot ==> not
data/blimps-3.9+ds/blimps/blk2mot.c:373: mot ==> not
data/blimps-3.9+ds/blimps/blkprob.c:60: Accomodate ==> Accommodate
data/blimps-3.9+ds/blimps/blkprob.c:102: strengh ==> strength
data/blimps-3.9+ds/blimps/blkprob.c:413: datbase ==> database
data/blimps-3.9+ds/blimps/blkprob.c:2823: Intialize ==> Initialize
data/blimps-3.9+ds/blimps/blocks.c:915: ouput ==> output
data/blimps-3.9+ds/blimps/blocks.c:933: ouput ==> output
data/blimps-3.9+ds/blimps/blocks_search.c:206: FO ==> OF, FOR
data/blimps-3.9+ds/blimps/blocks_search.c:336: SQuence ==> sequence
data/blimps-3.9+ds/blimps/blocks_search.c:355: SQuence ==> sequence
data/blimps-3.9+ds/blimps/blocks_search.c:508: occured ==> occurred
data/blimps-3.9+ds/blimps/blocks_search.c:520: occured ==> occurred
data/blimps-3.9+ds/blimps/blocks_search.c:530: occured ==> occurred
data/blimps-3.9+ds/blimps/block_vis.c:20: sacle ==> scale
data/blimps-3.9+ds/blimps/block_vis.c:120: Seperate ==> Separate
data/blimps-3.9+ds/blimps/block_vis.c:142: neccessary ==> necessary
data/blimps-3.9+ds/blimps/block_vis.c:719: neccessary ==> necessary
data/blimps-3.9+ds/blimps/block_vis.c:806: neccessary ==> necessary
data/blimps-3.9+ds/blimps/block_vis.c:835: neccessary ==> necessary
data/blimps-3.9+ds/blimps/blpssm.c:790: substition ==> substitution
data/blimps-3.9+ds/blimps/blweight.c:20: accomodate ==> accommodate
data/blimps-3.9+ds/blimps/blweight.c:790: ouput ==> output
data/blimps-3.9+ds/blimps/cobbler.c:226: Fpr ==> For, far, fps
data/blimps-3.9+ds/blimps/cobbler.c:279: Fpr ==> For, far, fps
data/blimps-3.9+ds/blimps/cobbler.c:294: Fpr ==> For, far, fps
data/blimps-3.9+ds/blimps/cobbler.c:298: Fpr ==> For, far, fps
data/blimps-3.9+ds/blimps/cobbler.c:298: Fpr ==> For, far, fps
data/blimps-3.9+ds/blimps/cobbler.c:477: Fpr ==> For, far, fps
data/blimps-3.9+ds/blimps/cobbler.c:532: Fpr ==> For, far, fps
data/blimps-3.9+ds/blimps/cobbler.c:978: Imbed ==> Embed
data/blimps-3.9+ds/blimps/fastaseqs.c:32: seqences ==> sequences
data/blimps-3.9+ds/blimps/find_biassed_blocks.c:434: begining ==> beginning
data/blimps-3.9+ds/blimps/find_biassed_blocks.c:435: begining ==> beginning
data/blimps-3.9+ds/blimps/find_biassed_blocks.c:700: isnt ==> isn't
data/blimps-3.9+ds/blimps/find_biassed_blocks.c:715: begining ==> beginning
data/blimps-3.9+ds/blimps/find_biassed_blocks.c:783: begining ==> beginning
data/blimps-3.9+ds/blimps/find_biassed_blocks.c:829: isnt ==> isn't
data/blimps-3.9+ds/blimps/format_block.c:11: behavoir ==> behavior
data/blimps-3.9+ds/blimps/format_block.c:353: begining ==> beginning
data/blimps-3.9+ds/blimps/format_block.c:808: occured ==> occurred
data/blimps-3.9+ds/blimps/htmlize-codehop.c:58: ocur ==> occur
data/blimps-3.9+ds/blimps/htmlize-codehop.c:148: throught ==> thought, through, throughout
data/blimps-3.9+ds/blimps/htmlize-codehop.c:206: ocur ==> occur
data/blimps-3.9+ds/blimps/htmlize-codehop.c:207: ocur ==> occur
data/blimps-3.9+ds/blimps/htmlize-codehop.c:240: ocur ==> occur
data/blimps-3.9+ds/blimps/htmlize-codehop.c:322: ocur ==> occur
data/blimps-3.9+ds/blimps/htmlize-codehop.c:327: ocur ==> occur
data/blimps-3.9+ds/blimps/htmlize-codehop.c:328: ocur ==> occur
data/blimps-3.9+ds/blimps/htmlize-codehop.c:335: ocur ==> occur
data/blimps-3.9+ds/blimps/interpro.c:1: auxillary ==> auxiliary
data/blimps-3.9+ds/blimps/LAMA.c:544: programing ==> programming
data/blimps-3.9+ds/blimps/LAMA.c:1723: isnt ==> isn't
data/blimps-3.9+ds/blimps/LAMA.c:1738: begining ==> beginning
data/blimps-3.9+ds/blimps/LAMA.c:1806: begining ==> beginning
data/blimps-3.9+ds/blimps/LAMA.c:1852: isnt ==> isn't
data/blimps-3.9+ds/blimps/LAMA_search.c:456: occured ==> occurred
data/blimps-3.9+ds/blimps/LAMA_search.c:581: ouput ==> output
data/blimps-3.9+ds/blimps/mablock.c:29: Accomodate ==> Accommodate
data/blimps-3.9+ds/blimps/mablock.c:877: ony ==> only
data/blimps-3.9+ds/blimps/makelogob.c:12: accomodate ==> accommodate
data/blimps-3.9+ds/blimps/makelogob.c:217: overlayed ==> overlaid
data/blimps-3.9+ds/blimps/makelogob.c:724: wirth ==> with, worth
data/blimps-3.9+ds/blimps/makelogob.c:818: compatability ==> compatibility
data/blimps-3.9+ds/blimps/makelogob.c:2281: converstion ==> conversion, conversation
data/blimps-3.9+ds/blimps/matrix_logob.c:29: adressed ==> addressed
data/blimps-3.9+ds/blimps/matrix_logob.c:267: represenation ==> representation
data/blimps-3.9+ds/blimps/matrix_logob.c:325: betwen ==> between
data/blimps-3.9+ds/blimps/matrix_logob.c:576: ans ==> and
data/blimps-3.9+ds/blimps/matrix_logob.c:581: ans ==> and
data/blimps-3.9+ds/blimps/matrix_logob.c:583: ans ==> and
data/blimps-3.9+ds/blimps/matrix_logob.c:592: ans ==> and
data/blimps-3.9+ds/blimps/matrix_logob.c:594: ans ==> and
data/blimps-3.9+ds/blimps/narrow.c:13: frequences ==> frequencies
data/blimps-3.9+ds/blimps/papssm.c:798: substition ==> substitution
data/blimps-3.9+ds/blimps/papssm.c:1220: sucessfully ==> successfully
data/blimps-3.9+ds/blimps/prints2blocks.c:17: erroneus ==> erroneous
data/blimps-3.9+ds/blimps/prints2blocks.c:107: transformated ==> transformed
data/blimps-3.9+ds/blimps/prints2blocks.c:328: begining ==> beginning
data/blimps-3.9+ds/blimps/prints2blocks.c:334: isnt ==> isn't
data/blimps-3.9+ds/blimps/prints2blocks.c:360: begining ==> beginning
data/blimps-3.9+ds/blimps/prints2blocks.c:580: isnt ==> isn't
data/blimps-3.9+ds/blimps/protomat.c:474: intialize ==> initialize
data/blimps-3.9+ds/blimps/pssmdist.c:259: Intialize ==> Initialize
data/blimps-3.9+ds/blimps/pssmdist.c:538: sucessfully ==> successfully
data/blimps-3.9+ds/blimps/sequences.c:434: apropriate ==> appropriate
data/blimps-3.9+ds/blimps/version.c:44: everytime ==> every time
data/blimps-3.9+ds/blimps/version.c:157: verson ==> version
data/blimps-3.9+ds/blimps/version.c:169: develoment ==> development
data/blimps-3.9+ds/blimps/errors.c:116: incase ==> in case
data/blimps-3.9+ds/blimps/errors.c:134: occured ==> occurred
data/blimps-3.9+ds/blimps/errors.c:158: occured ==> occurred
data/blimps-3.9+ds/blimps/errors.c:173: inconvienience ==> inconvenience
data/blimps-3.9+ds/blimps/Makefile.Linux:14: wich ==> which
data/blimps-3.9+ds/docs/colors:24: Ser ==> Set
data/blimps-3.9+ds/docs/colors:25: onthe ==> on the
data/blimps-3.9+ds/docs/default.amino.frq:20: Ser ==> Set
data/blimps-3.9+ds/docs/default.codon.frq:20: Ser ==> Set
data/blimps-3.9+ds/docs/identity.frq:20: Ser ==> Set
data/blimps-3.9+ds/examples/blimps/batch-search.pl:66: tyes ==> types, ties
data/blimps-3.9+ds/examples/blimps/batch-search.pl:69: tyes ==> types, ties
data/blimps-3.9+ds/examples/blimps/example.pros:928: VILLIN ==> VILLI, VILLAIN, VILLEIN
data/blimps-3.9+ds/examples/blimps/www-search.pl:14: FO ==> OF, FOR
data/blimps-3.9+ds/examples/blimps/distribution/exampleA.blk.bli:99: VILLIN ==> VILLI, VILLAIN, VILLEIN
data/blimps-3.9+ds/examples/blimps/distribution/exampleB.blk.bli:23: VILLIN ==> VILLI, VILLAIN, VILLEIN
data/blimps-3.9+ds/examples/blimps/distribution/exampleC.blk.bli:27: VILLIN ==> VILLI, VILLAIN, VILLEIN
data/blimps-3.9+ds/examples/blimps/distribution/exampleD.blk.bli:25: VILLIN ==> VILLI, VILLAIN, VILLEIN
data/blimps-3.9+ds/examples/blimps/distribution/exampleE.blk.bli:80: VILLIN ==> VILLI, VILLAIN, VILLEIN
data/blimps-3.9+ds/examples/blimps/distribution/multimat.out:32: ELEMEN ==> ELEMENT
data/blimps-3.9+ds/examples/blimps/distribution/multimat.out:33: ELEMEN ==> ELEMENT
data/blimps-3.9+ds/examples/blimps/distribution/multimat.out:34: ELEMEN ==> ELEMENT
data/blimps-3.9+ds/examples/blimps/distribution/multimat.out:35: ELEMEN ==> ELEMENT
data/blimps-3.9+ds/examples/blimps/distribution/multimat.out:36: ELEMEN ==> ELEMENT
data/blimps-3.9+ds/examples/blimps/distribution/multimat.out:70: ELEMEN ==> ELEMENT
data/blimps-3.9+ds/examples/blimps/distribution/multimat.out:71: ELEMEN ==> ELEMENT
data/blimps-3.9+ds/examples/blimps/distribution/multimat.out:72: ELEMEN ==> ELEMENT
data/blimps-3.9+ds/examples/blimps/distribution/multimat.out:73: ELEMEN ==> ELEMENT
data/blimps-3.9+ds/examples/blimps/distribution/multimat.out:74: ELEMEN ==> ELEMENT
data/blimps-3.9+ds/examples/blimps/distribution/multimat.out:108: ELEMEN ==> ELEMENT
data/blimps-3.9+ds/examples/blimps/distribution/multimat.out:109: ELEMEN ==> ELEMENT
data/blimps-3.9+ds/examples/blimps/distribution/multimat.out:110: ELEMEN ==> ELEMENT
data/blimps-3.9+ds/examples/blimps/distribution/multimat.out:111: ELEMEN ==> ELEMENT
data/blimps-3.9+ds/examples/blimps/distribution/multimat.out:112: ELEMEN ==> ELEMENT
data/blimps-3.9+ds/examples/blimps/distribution/multimat.out:146: ELEMEN ==> ELEMENT
data/blimps-3.9+ds/examples/blimps/distribution/multimat.out:147: ELEMEN ==> ELEMENT
data/blimps-3.9+ds/examples/blimps/distribution/multimat.out:148: ELEMEN ==> ELEMENT
data/blimps-3.9+ds/examples/blimps/distribution/multimat.out:149: ELEMEN ==> ELEMENT
data/blimps-3.9+ds/examples/blimps/distribution/multimat.out:150: ELEMEN ==> ELEMENT
data/blimps-3.9+ds/examples/blimps/distribution/multimat.out:322: VILLIN ==> VILLI, VILLAIN, VILLEIN
data/blimps-3.9+ds/examples/blimps/distribution/multimat.out:323: VILLIN ==> VILLI, VILLAIN, VILLEIN
data/blimps-3.9+ds/examples/blimps/distribution/multimat.out:324: VILLIN ==> VILLI, VILLAIN, VILLEIN
data/blimps-3.9+ds/examples/blimps/distribution/multimat.out:325: VILLIN ==> VILLI, VILLAIN, VILLEIN
data/blimps-3.9+ds/examples/blimps/distribution/multimat.out:326: VILLIN ==> VILLI, VILLAIN, VILLEIN
data/blimps-3.9+ds/examples/blimps/distribution/multimat.out:431: UTILIZ ==> UTILIZE
data/blimps-3.9+ds/examples/blimps/distribution/multimat.out:432: UTILIZ ==> UTILIZE
data/blimps-3.9+ds/examples/blimps/distribution/multimat.out:433: UTILIZ ==> UTILIZE
data/blimps-3.9+ds/examples/blimps/distribution/multimat.out:434: UTILIZ ==> UTILIZE
data/blimps-3.9+ds/examples/blimps/distribution/multimat.out:435: UTILIZ ==> UTILIZE
data/blimps-3.9+ds/examples/blimps/distribution/multimat.out:445: UTILIZ ==> UTILIZE
data/blimps-3.9+ds/examples/blimps/distribution/multimat.out:446: UTILIZ ==> UTILIZE
data/blimps-3.9+ds/examples/blimps/distribution/multimat.out:447: UTILIZ ==> UTILIZE
data/blimps-3.9+ds/examples/blimps/distribution/multimat.out:448: UTILIZ ==> UTILIZE
data/blimps-3.9+ds/examples/blimps/distribution/multimat.out:449: UTILIZ ==> UTILIZE
data/blimps-3.9+ds/examples/cobbler/default.amino.frq:20: Ser ==> Set
data/blimps-3.9+ds/examples/cobbler/default.codon.frq:20: Ser ==> Set
data/blimps-3.9+ds/examples/protomat/protomat.csh:45: mot ==> not
data/blimps-3.9+ds/examples/protomat/protomat.csh:92: mot ==> not
data/blimps-3.9+ds/include/blocks.h:133: ouput ==> output
data/blimps-3.9+ds/include/blocks.h:145: ouput ==> output
data/blimps-3.9+ds/include/convert.h:65: possition ==> position
data/blimps-3.9+ds/include/options.h:73: retreival ==> retrieval
data/blimps-3.9+ds/include/options.h:76: retreiving ==> retrieving
data/blimps-3.9+ds/include/version.h:107: verson ==> version
data/blimps-3.9+ds/include/protomat.h:41: occurences ==> occurrences
data/blimps-3.9+ds/include/protomat.h:204: Ajacency ==> Adjacency
data/blimps-3.9+ds/include/errors.h:21: Programing ==> Programming
data/blimps-3.9+ds/include/errors.h:72: occured ==> occurred
data/blimps-3.9+ds/protomat/getseq.c:117: infor ==> info
data/blimps-3.9+ds/protomat/motifj.c:1354: reseting ==> resetting
data/blimps-3.9+ds/protomat/motifj.c:1595: mot ==> not
data/blimps-3.9+ds/protomat/motifj.c:1596: mot ==> not
data/blimps-3.9+ds/protomat/motifj.c:1643: occurences ==> occurrences
data/blimps-3.9+ds/protomat/motifj.c:1737: mot ==> not
data/blimps-3.9+ds/protomat/motifj.c:1741: mot ==> not
data/blimps-3.9+ds/protomat/motifj.c:1748: mot ==> not
data/blimps-3.9+ds/protomat/motifj.c:1751: mot ==> not
data/blimps-3.9+ds/protomat/motifj.c:1752: mot ==> not
data/blimps-3.9+ds/protomat/motifj.c:1758: mot ==> not
data/blimps-3.9+ds/protomat/motifj.c:1759: mot ==> not
data/blimps-3.9+ds/protomat/motifj.c:1760: mot ==> not
data/blimps-3.9+ds/protomat/motifj.c:1761: mot ==> not
data/blimps-3.9+ds/protomat/motifj.c:1762: mot ==> not
data/blimps-3.9+ds/protomat/motifj.c:1763: mot ==> not
data/blimps-3.9+ds/protomat/motifj.c:1764: mot ==> not
data/blimps-3.9+ds/protomat/motifj.c:1765: mot ==> not
data/blimps-3.9+ds/protomat/motifj.c:1766: mot ==> not
data/blimps-3.9+ds/protomat/motifj.c:1771: mot ==> not
data/blimps-3.9+ds/protomat/motifj.c:1773: mot ==> not
data/blimps-3.9+ds/protomat/motifj.c:1774: mot ==> not
data/blimps-3.9+ds/protomat/motifj.c:1775: mot ==> not
data/blimps-3.9+ds/protomat/motomat.c:5: mot ==> not
data/blimps-3.9+ds/protomat/motomat.c:6: mot ==> not
data/blimps-3.9+ds/protomat/motomat.c:119: mot ==> not
data/blimps-3.9+ds/protomat/motomat.c:139: mot ==> not
data/blimps-3.9+ds/protomat/motomat.c:167: mot ==> not
data/blimps-3.9+ds/protomat/motomat.c:172: mot ==> not
data/blimps-3.9+ds/protomat/motomat.c:173: mot ==> not
data/blimps-3.9+ds/protomat/motomat.c:186: mot ==> not
data/blimps-3.9+ds/protomat/motomat.c:190: mot ==> not
data/blimps-3.9+ds/protomat/motomat.c:193: mot ==> not
data/blimps-3.9+ds/protomat/motomat.c:194: mot ==> not
data/blimps-3.9+ds/protomat/motomat.c:195: mot ==> not
data/blimps-3.9+ds/protomat/motomat.c:196: mot ==> not
data/blimps-3.9+ds/protomat/motomat.c:197: mot ==> not
data/blimps-3.9+ds/protomat/motomat.c:198: mot ==> not
data/blimps-3.9+ds/protomat/motomat.c:204: mot ==> not
data/blimps-3.9+ds/protomat/motomat.c:215: mot ==> not
data/blimps-3.9+ds/protomat/motomat.c:218: mot ==> not
data/blimps-3.9+ds/protomat/motomat.c:229: mot ==> not
data/blimps-3.9+ds/protomat/motomat.c:229: mot ==> not
data/blimps-3.9+ds/protomat/motomat.c:232: mot ==> not
data/blimps-3.9+ds/protomat/motomat.c:234: mot ==> not
data/blimps-3.9+ds/protomat/motomat.c:235: mot ==> not
data/blimps-3.9+ds/protomat/motomat.c:238: mot ==> not
data/blimps-3.9+ds/protomat/motomat.c:240: mot ==> not
data/blimps-3.9+ds/protomat/motomat.c:254: mot ==> not
data/blimps-3.9+ds/protomat/motomat.c:255: mot ==> not
data/blimps-3.9+ds/protomat/motomat.c:255: mot ==> not
data/blimps-3.9+ds/protomat/motomat.c:259: mot ==> not
data/blimps-3.9+ds/protomat/motomat.c:367: becasuse ==> because
data/blimps-3.9+ds/protomat/motomat.c:757: occurence ==> occurrence
data/blimps-3.9+ds/protomat/motomat2.c:216: intializes ==> initializes
data/blimps-3.9+ds/protomat/motomat2.c:410: postive ==> positive
data/blimps-3.9+ds/protomat/multimat.c:61: strengh ==> strength
data/blimps-3.9+ds/protomat/blksort.c:73: strengh ==> strength
data/blimps-3.9+ds/protomat/blksort.c:265: datbase ==> database
data/blimps-3.9+ds/protomat/blksort.c:1273: occurences ==> occurrences
data/blimps-3.9+ds/protomat/motifj.h:48: occurences ==> occurrences
data/blimps-3.9+ds/protomat/motifj.h:217: Ajacency ==> Adjacency
data/blimps-3.9+ds/protomat/motmisc.c:577: intialize ==> initialize
data/blimps-3.9+ds/protomat/uextract.c:228: infor ==> info
data/blimps-3.9+ds/www/biased_blocks.html:14: neccesarily ==> necessarily
data/blimps-3.9+ds/www/biassed_blocks.html:14: neccesarily ==> necessarily
data/blimps-3.9+ds/www/contact.html:30: ot ==> to, of, or
data/blimps-3.9+ds/www/blocks_biblio.html:24: dervied ==> derived
data/blimps-3.9+ds/www/help/names.all:229: Formate ==> Format
data/blimps-3.9+ds/www/help/names.all:939: Formate ==> Format
data/blimps-3.9+ds/www/help/names.all:1335: FliE ==> file
data/blimps-3.9+ds/www/help/names.all:1985: Selectin ==> Selection, selecting
data/blimps-3.9+ds/www/help/names.all:2168: regon ==> region
data/blimps-3.9+ds/www/help/names.all:2226: holliday ==> holiday
data/blimps-3.9+ds/www/help/names.all:2493: Villin ==> Villi, villain, villein
data/blimps-3.9+ds/www/help/names.all:2509: FATC ==> FACT
data/blimps-3.9+ds/www/help/names.all:2544: IIF ==> IF
data/blimps-3.9+ds/www/help/names.all:2769: unknow ==> unknown
data/blimps-3.9+ds/www/help/names.all:2965: Ser ==> Set
data/blimps-3.9+ds/www/help/names.all:2990: Formate ==> Format
data/blimps-3.9+ds/www/help/names.all:3797: THIK ==> THICK, THINK
data/blimps-3.9+ds/www/help/names.all:4173: Formate ==> Format
data/blimps-3.9+ds/www/help/names.all:5031: Cna ==> Can
data/blimps-3.9+ds/www/help/names.all:5135: Holliday ==> Holiday
data/blimps-3.9+ds/www/help/names.all:5149: IIF ==> IF
data/blimps-3.9+ds/www/help/names.prints:419: FliE ==> file
data/blimps-3.9+ds/www/help/names.prints:708: Selectin ==> Selection, selecting
data/blimps-3.9+ds/www/help/names.prints:1141: THIK ==> THICK, THINK
data/blimps-3.9+ds/www/help/names.protomat:165: Formate ==> Format
data/blimps-3.9+ds/www/help/names.protomat:641: Formate ==> Format
data/blimps-3.9+ds/www/help/names.protomat:1405: regon ==> region
data/blimps-3.9+ds/www/help/names.protomat:1463: holliday ==> holiday
data/blimps-3.9+ds/www/help/names.protomat:1629: Villin ==> Villi, villain, villein
data/blimps-3.9+ds/www/help/names.protomat:1645: FATC ==> FACT
data/blimps-3.9+ds/www/help/names.protomat:1679: IIF ==> IF
data/blimps-3.9+ds/www/help/names.protomat:1860: unknow ==> unknown
data/blimps-3.9+ds/www/help/names.protomat:2007: Ser ==> Set
data/blimps-3.9+ds/www/help/names.protomat:2032: Formate ==> Format
data/blimps-3.9+ds/www/help/names.protomat:2929: Formate ==> Format
data/blimps-3.9+ds/www/help/names.protomat:3678: Cna ==> Can
data/blimps-3.9+ds/www/help/names.protomat:3782: Holliday ==> Holiday
data/blimps-3.9+ds/www/help/names.protomat:3796: IIF ==> IF
data/blimps-3.9+ds/www/help/about_impala.html:75: Ponting ==> Pointing
data/blimps-3.9+ds/www/help/about_trees.html:76: tre ==> tree
data/blimps-3.9+ds/www/help/email.html:75: FO ==> OF, FOR
data/blimps-3.9+ds/www/help/email.html:108: FO ==> OF, FOR
data/blimps-3.9+ds/www/help/email.html:124: FO ==> OF, FOR
data/blimps-3.9+ds/www/help/email.html:140: FO ==> OF, FOR
data/blimps-3.9+ds/www/help/formatter_help.html:72: begining ==> beginning
data/blimps-3.9+ds/www/help/formatter_help.html:94: begining ==> beginning
data/blimps-3.9+ds/www/help/help.html:92: occurence ==> occurrence
data/blimps-3.9+ds/www/help/help.html:310: sumbitted ==> submitted
data/blimps-3.9+ds/debian/README.Debian:9: maintaner ==> maintainer
data/blimps-3.9+ds/debian/README.source:8: maintaner ==> maintainer
data/blimps-3.9+ds/debian/changelog:4: droping ==> dropping
data/blimps-3.9+ds/debian/patches/gets.patch:929: ouput ==> output
data/blimps-3.9+ds/debian/patches/gets.patch:1121: ans ==> and
data/blimps-3.9+ds/debian/patches/gets.patch:1122: ans ==> and
data/blimps-3.9+ds/debian/patches/gets.patch:1124: ans ==> and
data/blimps-3.9+ds/debian/patches/gets.patch:1659: incase ==> in case
data/blimps-3.9+ds/debian/patches/gets.patch:1660: incase ==> in case
data/blimps-3.9+ds/.pc/gets.patch/blimps/addseqs.c:689: Intialize ==> Initialize
data/blimps-3.9+ds/.pc/gets.patch/blimps/biassed_blocks_finder.c:223: occured ==> occurred
data/blimps-3.9+ds/.pc/gets.patch/blimps/blalign.c:24: Accomodate ==> Accommodate
data/blimps-3.9+ds/.pc/gets.patch/blimps/blalign.c:382: accomodate ==> accommodate
data/blimps-3.9+ds/.pc/gets.patch/blimps/blalign.c:430: accomodate ==> accommodate
data/blimps-3.9+ds/.pc/gets.patch/blimps/blalign.c:527: bewteen ==> between
data/blimps-3.9+ds/.pc/gets.patch/blimps/blalign.c:665: accomodate ==> accommodate
data/blimps-3.9+ds/.pc/gets.patch/blimps/blalign.c:844: accomodate ==> accommodate
data/blimps-3.9+ds/.pc/gets.patch/blimps/blk2mot.c:3: mot ==> not
data/blimps-3.9+ds/.pc/gets.patch/blimps/blk2mot.c:8: mot ==> not
data/blimps-3.9+ds/.pc/gets.patch/blimps/blk2mot.c:123: mot ==> not
data/blimps-3.9+ds/.pc/gets.patch/blimps/blk2mot.c:351: mot ==> not
data/blimps-3.9+ds/.pc/gets.patch/blimps/blk2mot.c:352: mot ==> not
data/blimps-3.9+ds/.pc/gets.patch/blimps/blk2mot.c:358: mot ==> not
data/blimps-3.9+ds/.pc/gets.patch/blimps/blk2mot.c:359: mot ==> not
data/blimps-3.9+ds/.pc/gets.patch/blimps/blk2mot.c:360: mot ==> not
data/blimps-3.9+ds/.pc/gets.patch/blimps/blk2mot.c:361: mot ==> not
data/blimps-3.9+ds/.pc/gets.patch/blimps/blk2mot.c:362: mot ==> not
data/blimps-3.9+ds/.pc/gets.patch/blimps/blk2mot.c:363: mot ==> not
data/blimps-3.9+ds/.pc/gets.patch/blimps/blk2mot.c:364: mot ==> not
data/blimps-3.9+ds/.pc/gets.patch/blimps/blk2mot.c:365: mot ==> not
data/blimps-3.9+ds/.pc/gets.patch/blimps/blk2mot.c:366: mot ==> not
data/blimps-3.9+ds/.pc/gets.patch/blimps/blk2mot.c:370: mot ==> not
data/blimps-3.9+ds/.pc/gets.patch/blimps/blk2mot.c:372: mot ==> not
data/blimps-3.9+ds/.pc/gets.patch/blimps/blk2mot.c:373: mot ==> not
data/blimps-3.9+ds/.pc/gets.patch/blimps/blkprob.c:60: Accomodate ==> Accommodate
data/blimps-3.9+ds/.pc/gets.patch/blimps/blkprob.c:102: strengh ==> strength
data/blimps-3.9+ds/.pc/gets.patch/blimps/blkprob.c:413: datbase ==> database
data/blimps-3.9+ds/.pc/gets.patch/blimps/blkprob.c:2823: Intialize ==> Initialize
data/blimps-3.9+ds/.pc/gets.patch/blimps/blocks.c:915: ouput ==> output
data/blimps-3.9+ds/.pc/gets.patch/blimps/blocks.c:933: ouput ==> output
data/blimps-3.9+ds/.pc/gets.patch/blimps/blocks_search.c:206: FO ==> OF, FOR
data/blimps-3.9+ds/.pc/gets.patch/blimps/blocks_search.c:335: SQuence ==> sequence
data/blimps-3.9+ds/.pc/gets.patch/blimps/blocks_search.c:354: SQuence ==> sequence
data/blimps-3.9+ds/.pc/gets.patch/blimps/blocks_search.c:507: occured ==> occurred
data/blimps-3.9+ds/.pc/gets.patch/blimps/blocks_search.c:519: occured ==> occurred
data/blimps-3.9+ds/.pc/gets.patch/blimps/blocks_search.c:529: occured ==> occurred
data/blimps-3.9+ds/.pc/gets.patch/blimps/block_vis.c:20: sacle ==> scale
data/blimps-3.9+ds/.pc/gets.patch/blimps/block_vis.c:120: Seperate ==> Separate
data/blimps-3.9+ds/.pc/gets.patch/blimps/block_vis.c:142: neccessary ==> necessary
data/blimps-3.9+ds/.pc/gets.patch/blimps/block_vis.c:719: neccessary ==> necessary
data/blimps-3.9+ds/.pc/gets.patch/blimps/block_vis.c:806: neccessary ==> necessary
data/blimps-3.9+ds/.pc/gets.patch/blimps/block_vis.c:835: neccessary ==> necessary
data/blimps-3.9+ds/.pc/gets.patch/blimps/blpssm.c:790: substition ==> substitution
data/blimps-3.9+ds/.pc/gets.patch/blimps/blweight.c:20: accomodate ==> accommodate
data/blimps-3.9+ds/.pc/gets.patch/blimps/blweight.c:789: ouput ==> output
data/blimps-3.9+ds/.pc/gets.patch/blimps/cobbler.c:226: Fpr ==> For, far, fps
data/blimps-3.9+ds/.pc/gets.patch/blimps/cobbler.c:279: Fpr ==> For, far, fps
data/blimps-3.9+ds/.pc/gets.patch/blimps/cobbler.c:294: Fpr ==> For, far, fps
data/blimps-3.9+ds/.pc/gets.patch/blimps/cobbler.c:298: Fpr ==> For, far, fps
data/blimps-3.9+ds/.pc/gets.patch/blimps/cobbler.c:298: Fpr ==> For, far, fps
data/blimps-3.9+ds/.pc/gets.patch/blimps/cobbler.c:477: Fpr ==> For, far, fps
data/blimps-3.9+ds/.pc/gets.patch/blimps/cobbler.c:532: Fpr ==> For, far, fps
data/blimps-3.9+ds/.pc/gets.patch/blimps/cobbler.c:978: Imbed ==> Embed
data/blimps-3.9+ds/.pc/gets.patch/blimps/fastaseqs.c:32: seqences ==> sequences
data/blimps-3.9+ds/.pc/gets.patch/blimps/find_biassed_blocks.c:434: begining ==> beginning
data/blimps-3.9+ds/.pc/gets.patch/blimps/find_biassed_blocks.c:435: begining ==> beginning
data/blimps-3.9+ds/.pc/gets.patch/blimps/find_biassed_blocks.c:700: isnt ==> isn't
data/blimps-3.9+ds/.pc/gets.patch/blimps/find_biassed_blocks.c:715: begining ==> beginning
data/blimps-3.9+ds/.pc/gets.patch/blimps/find_biassed_blocks.c:783: begining ==> beginning
data/blimps-3.9+ds/.pc/gets.patch/blimps/find_biassed_blocks.c:829: isnt ==> isn't
data/blimps-3.9+ds/.pc/gets.patch/blimps/format_block.c:11: behavoir ==> behavior
data/blimps-3.9+ds/.pc/gets.patch/blimps/format_block.c:353: begining ==> beginning
data/blimps-3.9+ds/.pc/gets.patch/blimps/format_block.c:808: occured ==> occurred
data/blimps-3.9+ds/.pc/gets.patch/blimps/htmlize-codehop.c:58: ocur ==> occur
data/blimps-3.9+ds/.pc/gets.patch/blimps/htmlize-codehop.c:148: throught ==> thought, through, throughout
data/blimps-3.9+ds/.pc/gets.patch/blimps/htmlize-codehop.c:206: ocur ==> occur
data/blimps-3.9+ds/.pc/gets.patch/blimps/htmlize-codehop.c:207: ocur ==> occur
data/blimps-3.9+ds/.pc/gets.patch/blimps/htmlize-codehop.c:240: ocur ==> occur
data/blimps-3.9+ds/.pc/gets.patch/blimps/htmlize-codehop.c:322: ocur ==> occur
data/blimps-3.9+ds/.pc/gets.patch/blimps/htmlize-codehop.c:327: ocur ==> occur
data/blimps-3.9+ds/.pc/gets.patch/blimps/htmlize-codehop.c:328: ocur ==> occur
data/blimps-3.9+ds/.pc/gets.patch/blimps/htmlize-codehop.c:335: ocur ==> occur
data/blimps-3.9+ds/.pc/gets.patch/blimps/interpro.c:1: auxillary ==> auxiliary
data/blimps-3.9+ds/.pc/gets.patch/blimps/LAMA.c:544: programing ==> programming
data/blimps-3.9+ds/.pc/gets.patch/blimps/LAMA.c:1720: isnt ==> isn't
data/blimps-3.9+ds/.pc/gets.patch/blimps/LAMA.c:1735: begining ==> beginning
data/blimps-3.9+ds/.pc/gets.patch/blimps/LAMA.c:1803: begining ==> beginning
data/blimps-3.9+ds/.pc/gets.patch/blimps/LAMA.c:1849: isnt ==> isn't
data/blimps-3.9+ds/.pc/gets.patch/blimps/LAMA_search.c:456: occured ==> occurred
data/blimps-3.9+ds/.pc/gets.patch/blimps/LAMA_search.c:581: ouput ==> output
data/blimps-3.9+ds/.pc/gets.patch/blimps/mablock.c:29: Accomodate ==> Accommodate
data/blimps-3.9+ds/.pc/gets.patch/blimps/mablock.c:876: ony ==> only
data/blimps-3.9+ds/.pc/gets.patch/blimps/makelogob.c:12: accomodate ==> accommodate
data/blimps-3.9+ds/.pc/gets.patch/blimps/makelogob.c:217: overlayed ==> overlaid
data/blimps-3.9+ds/.pc/gets.patch/blimps/makelogob.c:724: wirth ==> with, worth
data/blimps-3.9+ds/.pc/gets.patch/blimps/makelogob.c:818: compatability ==> compatibility
data/blimps-3.9+ds/.pc/gets.patch/blimps/makelogob.c:2281: converstion ==> conversion, conversation
data/blimps-3.9+ds/.pc/gets.patch/blimps/matrix_logob.c:29: adressed ==> addressed
data/blimps-3.9+ds/.pc/gets.patch/blimps/matrix_logob.c:266: represenation ==> representation
data/blimps-3.9+ds/.pc/gets.patch/blimps/matrix_logob.c:324: betwen ==> between
data/blimps-3.9+ds/.pc/gets.patch/blimps/matrix_logob.c:575: ans ==> and
data/blimps-3.9+ds/.pc/gets.patch/blimps/matrix_logob.c:580: ans ==> and
data/blimps-3.9+ds/.pc/gets.patch/blimps/matrix_logob.c:582: ans ==> and
data/blimps-3.9+ds/.pc/gets.patch/blimps/matrix_logob.c:591: ans ==> and
data/blimps-3.9+ds/.pc/gets.patch/blimps/matrix_logob.c:593: ans ==> and
data/blimps-3.9+ds/.pc/gets.patch/blimps/narrow.c:13: frequences ==> frequencies
data/blimps-3.9+ds/.pc/gets.patch/blimps/papssm.c:798: substition ==> substitution
data/blimps-3.9+ds/.pc/gets.patch/blimps/papssm.c:1220: sucessfully ==> successfully
data/blimps-3.9+ds/.pc/gets.patch/blimps/prints2blocks.c:17: erroneus ==> erroneous
data/blimps-3.9+ds/.pc/gets.patch/blimps/prints2blocks.c:107: transformated ==> transformed
data/blimps-3.9+ds/.pc/gets.patch/blimps/prints2blocks.c:328: begining ==> beginning
data/blimps-3.9+ds/.pc/gets.patch/blimps/prints2blocks.c:334: isnt ==> isn't
data/blimps-3.9+ds/.pc/gets.patch/blimps/prints2blocks.c:360: begining ==> beginning
data/blimps-3.9+ds/.pc/gets.patch/blimps/prints2blocks.c:580: isnt ==> isn't
data/blimps-3.9+ds/.pc/gets.patch/blimps/protomat.c:473: intialize ==> initialize
data/blimps-3.9+ds/.pc/gets.patch/blimps/pssmdist.c:259: Intialize ==> Initialize
data/blimps-3.9+ds/.pc/gets.patch/blimps/pssmdist.c:538: sucessfully ==> successfully
data/blimps-3.9+ds/.pc/gets.patch/blimps/sequences.c:434: apropriate ==> appropriate
data/blimps-3.9+ds/.pc/gets.patch/blimps/version.c:44: everytime ==> every time
data/blimps-3.9+ds/.pc/gets.patch/blimps/version.c:157: verson ==> version
data/blimps-3.9+ds/.pc/gets.patch/blimps/version.c:169: develoment ==> development
data/blimps-3.9+ds/.pc/gets.patch/blimps/errors.c:116: incase ==> in case
data/blimps-3.9+ds/.pc/gets.patch/blimps/errors.c:134: occured ==> occurred
data/blimps-3.9+ds/.pc/gets.patch/blimps/errors.c:158: occured ==> occurred
data/blimps-3.9+ds/.pc/gets.patch/blimps/errors.c:173: inconvienience ==> inconvenience
data/blimps-3.9+ds/.pc/gets.patch/include/protomat.h:41: occurences ==> occurrences
data/blimps-3.9+ds/.pc/gets.patch/include/protomat.h:204: Ajacency ==> Adjacency
data/blimps-3.9+ds/.pc/gets.patch/include/errors.h:21: Programing ==> Programming
data/blimps-3.9+ds/.pc/gets.patch/include/errors.h:72: occured ==> occurred
data/blimps-3.9+ds/.pc/gets.patch/protomat/blksort.c:73: strengh ==> strength
data/blimps-3.9+ds/.pc/gets.patch/protomat/blksort.c:265: datbase ==> database
data/blimps-3.9+ds/.pc/gets.patch/protomat/blksort.c:1273: occurences ==> occurrences
data/blimps-3.9+ds/.pc/gets.patch/protomat/motifj.h:48: occurences ==> occurrences
data/blimps-3.9+ds/.pc/gets.patch/protomat/motifj.h:217: Ajacency ==> Adjacency
data/blimps-3.9+ds/.pc/gets.patch/protomat/motmisc.c:577: intialize ==> initialize
data/blimps-3.9+ds/.pc/gets.patch/protomat/uextract.c:228: infor ==> info
data/blimps-3.9+ds/.pc/makefile.patch/blimps/Makefile.Linux:14: wich ==> which
data/blimps-3.9+ds/.pc/hardening.patch/blimps/Makefile.Linux:14: wich ==> which