data/kalign-3.3/dev/data/BB30014.msf:168: TE ==> THE, BE, WE
data/kalign-3.3/dev/data/BB30014.msf:170: TE ==> THE, BE, WE
data/kalign-3.3/scripts/balibase_test.org:239: mata ==> meta, mater
data/kalign-3.3/scripts/balibase_test.org:455: vie ==> via
data/kalign-3.3/scripts/balibase_test.org:623: mata ==> meta, mater
data/kalign-3.3/scripts/balibase_test.org:788: mata ==> meta, mater
data/kalign-3.3/scripts/balibase_test.org:844: vie ==> via
data/kalign-3.3/scripts/balibase_test.org:844: vie ==> via
data/kalign-3.3/scripts/balibase_test.org:856: vie ==> via
data/kalign-3.3/scripts/balibase_test.org:856: vie ==> via
data/kalign-3.3/scripts/balibase_test.org:868: vie ==> via
data/kalign-3.3/scripts/balibase_test.org:868: vie ==> via
data/kalign-3.3/scripts/balibase_test.org:868: vie ==> via
data/kalign-3.3/scripts/balibase_test.org:868: vie ==> via
data/kalign-3.3/scripts/balibase_test.org:869: vie ==> via
data/kalign-3.3/scripts/balibase_test.org:869: vie ==> via
data/kalign-3.3/scripts/balibase_test.org:997: vie ==> via
data/kalign-3.3/scripts/balibase_test.org:1001: vie ==> via
data/kalign-3.3/scripts/balibase_test.org:1005: vie ==> via
data/kalign-3.3/scripts/balibase_test.org:1010: vie ==> via
data/kalign-3.3/scripts/balibase_test.org:1014: vie ==> via
data/kalign-3.3/scripts/balibase_test.org:1019: vie ==> via
data/kalign-3.3/scripts/balibase_test.org:1101: vie ==> via
data/kalign-3.3/scripts/balibase_test.org:1101: vie ==> via
data/kalign-3.3/scripts/balibase_test.org:1194: mata ==> meta, mater
data/kalign-3.3/scripts/benchmark.org:198: vie ==> via
data/kalign-3.3/scripts/benchmark.org:198: vie ==> via
data/kalign-3.3/scripts/benchmark.org:210: vie ==> via
data/kalign-3.3/scripts/benchmark.org:210: vie ==> via
data/kalign-3.3/scripts/benchmark.org:222: vie ==> via
data/kalign-3.3/scripts/benchmark.org:224: vie ==> via
data/kalign-3.3/scripts/benchmark.org:224: vie ==> via
data/kalign-3.3/scripts/benchmark.org:225: vie ==> via
data/kalign-3.3/scripts/benchmark.org:226: vie ==> via
data/kalign-3.3/scripts/benchmark.org:227: vie ==> via
data/kalign-3.3/scripts/benchmark.org:229: vie ==> via
data/kalign-3.3/scripts/benchmark.org:229: vie ==> via
data/kalign-3.3/scripts/benchmark.org:480: vie ==> via
data/kalign-3.3/scripts/benchmark.org:672: vie ==> via
data/kalign-3.3/scripts/benchmark.org:676: vie ==> via
data/kalign-3.3/scripts/benchmark.org:680: vie ==> via
data/kalign-3.3/scripts/benchmark.org:685: vie ==> via
data/kalign-3.3/src/align_io.c:214: dealign ==> dealing
data/kalign-3.3/src/align_io.h:42: dealign ==> dealing
data/kalign-3.3/src/aln_controller.c:228: foward ==> forward
data/kalign-3.3/src/aln_controller.c:262: foward ==> forward
data/kalign-3.3/src/aln_controller.c:297: foward ==> forward
data/kalign-3.3/src/aln_controller.c:333: foward ==> forward
data/kalign-3.3/src/aln_controller.c:365: foward ==> forward
data/kalign-3.3/src/aln_controller.c:399: foward ==> forward
data/kalign-3.3/src/aln_controller.c:452: foward ==> forward
data/kalign-3.3/src/aln_controller.c:487: foward ==> forward
data/kalign-3.3/src/aln_controller.c:522: foward ==> forward
data/kalign-3.3/src/aln_controller.c:558: foward ==> forward
data/kalign-3.3/src/aln_controller.c:590: foward ==> forward
data/kalign-3.3/src/aln_controller.c:624: foward ==> forward
data/kalign-3.3/src/aln_setup.c:107: extention ==> extension
data/kalign-3.3/src/aln_setup.c:114: extention ==> extension
data/kalign-3.3/src/esl_stopwatch.c:354: numer ==> number
data/kalign-3.3/src/kchaos.c:201: Somethign ==> Something
data/kalign-3.3/src/msa.h:57: dealign ==> dealing
data/kalign-3.3/src/pick_anchor.c:83: Cound ==> Could, count
data/kalign-3.3/src/queue.c:27: nd ==> and, 2nd
data/kalign-3.3/src/queue.c:30: nd ==> and, 2nd
data/kalign-3.3/src/queue.c:34: nd ==> and, 2nd
data/kalign-3.3/src/queue.c:36: nd ==> and, 2nd
data/kalign-3.3/src/run_get_param.c:233: dealign ==> dealing
data/kalign-3.3/src/tlrng.c:33: varius ==> various
data/kalign-3.3/src/alignment.c:561: foward ==> forward
data/kalign-3.3/src/alignment.c:597: foward ==> forward
data/kalign-3.3/src/alignment.c:634: foward ==> forward
data/kalign-3.3/src/alignment.c:668: foward ==> forward
data/kalign-3.3/src/alignment.c:701: foward ==> forward
data/kalign-3.3/src/alignment.c:735: foward ==> forward
data/kalign-3.3/src/alignment.c:1012: FOWARD ==> FORWARD
data/kalign-3.3/src/alignment.c:1157: foward ==> forward
data/kalign-3.3/src/alignment.c:1193: foward ==> forward
data/kalign-3.3/src/alignment.c:1229: foward ==> forward
data/kalign-3.3/src/alignment.c:1265: foward ==> forward
data/kalign-3.3/src/alignment.c:1298: foward ==> forward
data/kalign-3.3/src/alignment.c:1333: foward ==> forward
data/kalign-3.3/src/alignment.c:1606: FOWARD ==> FORWARD
data/kalign-3.3/src/alignment.c:1756: foward ==> forward
data/kalign-3.3/src/alignment.c:1792: foward ==> forward
data/kalign-3.3/src/alignment.c:1828: foward ==> forward
data/kalign-3.3/src/alignment.c:1863: foward ==> forward
data/kalign-3.3/src/alignment.c:1896: foward ==> forward
data/kalign-3.3/src/alignment.c:1930: foward ==> forward
data/kalign-3.3/src/alignment.c:2445: extention ==> extension
data/kalign-3.3/src/alignment.c:2452: extention ==> extension
data/kalign-3.3/src/misc.c:239: circularly ==> circular
data/kalign-3.3/debian/changelog:33: compatability ==> compatibility
data/kalign-3.3/debian/changelog:166: Upadated ==> Updated
data/kalign-3.3/.pc/simde/src/alignment.c:560: foward ==> forward
data/kalign-3.3/.pc/simde/src/alignment.c:596: foward ==> forward
data/kalign-3.3/.pc/simde/src/alignment.c:633: foward ==> forward
data/kalign-3.3/.pc/simde/src/alignment.c:667: foward ==> forward
data/kalign-3.3/.pc/simde/src/alignment.c:700: foward ==> forward
data/kalign-3.3/.pc/simde/src/alignment.c:734: foward ==> forward
data/kalign-3.3/.pc/simde/src/alignment.c:1011: FOWARD ==> FORWARD
data/kalign-3.3/.pc/simde/src/alignment.c:1156: foward ==> forward
data/kalign-3.3/.pc/simde/src/alignment.c:1192: foward ==> forward
data/kalign-3.3/.pc/simde/src/alignment.c:1228: foward ==> forward
data/kalign-3.3/.pc/simde/src/alignment.c:1264: foward ==> forward
data/kalign-3.3/.pc/simde/src/alignment.c:1297: foward ==> forward
data/kalign-3.3/.pc/simde/src/alignment.c:1332: foward ==> forward
data/kalign-3.3/.pc/simde/src/alignment.c:1605: FOWARD ==> FORWARD
data/kalign-3.3/.pc/simde/src/alignment.c:1755: foward ==> forward
data/kalign-3.3/.pc/simde/src/alignment.c:1791: foward ==> forward
data/kalign-3.3/.pc/simde/src/alignment.c:1827: foward ==> forward
data/kalign-3.3/.pc/simde/src/alignment.c:1862: foward ==> forward
data/kalign-3.3/.pc/simde/src/alignment.c:1895: foward ==> forward
data/kalign-3.3/.pc/simde/src/alignment.c:1929: foward ==> forward
data/kalign-3.3/.pc/simde/src/alignment.c:2444: extention ==> extension
data/kalign-3.3/.pc/simde/src/alignment.c:2451: extention ==> extension
data/kalign-3.3/.pc/simde/src/misc.c:241: circularly ==> circular