data/kmer-0~20150903+r2013/README.leaff:99: parititions ==> partitions
data/kmer-0~20150903+r2013/README.compiling:52: debuging ==> debugging
data/kmer-0~20150903+r2013/README.compiling:67: pyhton ==> python
data/kmer-0~20150903+r2013/Makefile.wiki:4: buld ==> build
data/kmer-0~20150903+r2013/Makefile.wiki:12: referrenced ==> referenced
data/kmer-0~20150903+r2013/Makefile.wiki:170: imediately ==> immediately
data/kmer-0~20150903+r2013/Makefile.wiki:285: imediate ==> immediate
data/kmer-0~20150903+r2013/Makefile.wiki:296: imediately ==> immediately
data/kmer-0~20150903+r2013/Makefile.wiki:862: whcih ==> which
data/kmer-0~20150903+r2013/Makefile.wiki:865: guarranteed ==> guaranteed
data/kmer-0~20150903+r2013/Makefile.wiki:1213: auxilliary ==> auxiliary
data/kmer-0~20150903+r2013/libutil/readBuffer.H:49: wierd ==> weird
data/kmer-0~20150903+r2013/libutil/readBuffer.C:117: ths ==> the, this
data/kmer-0~20150903+r2013/libutil/util++.H:11: endianess ==> endianness
data/kmer-0~20150903+r2013/libutil/sweatShop.C:246: beacuse ==> because
data/kmer-0~20150903+r2013/libutil/speedCounter.C:48: hightest ==> highest
data/kmer-0~20150903+r2013/libutil/Make.include:16: endianess ==> endianness
data/kmer-0~20150903+r2013/libutil/endianess.H:11: endianess ==> endianness
data/kmer-0~20150903+r2013/libutil/bitPackedFile.H:77: endianess ==> endianness
data/kmer-0~20150903+r2013/libutil/bigQueue.H:35: extenstion ==> extension
data/kmer-0~20150903+r2013/libutil/bigQueue.H:53: presumabely ==> presumably
data/kmer-0~20150903+r2013/libutil/bitPackedFile.C:86: endianess ==> endianness
data/kmer-0~20150903+r2013/libutil/bitPackedFile.C:106: endianess ==> endianness
data/kmer-0~20150903+r2013/libutil/bitPackedFile.C:152: endianess ==> endianness
data/kmer-0~20150903+r2013/libutil/test/test-md5.c:23: ans ==> and
data/kmer-0~20150903+r2013/libutil/test/test-md5.c:29: ans ==> and
data/kmer-0~20150903+r2013/libutil/test/test-md5.c:31: ans ==> and
data/kmer-0~20150903+r2013/libutil/test/test-bitPackedArray.C:30: ans ==> and
data/kmer-0~20150903+r2013/libutil/test/test-bitPackedArray.C:47: ans ==> and
data/kmer-0~20150903+r2013/libutil/test/test-bitPackedArray.C:55: ans ==> and
data/kmer-0~20150903+r2013/libutil/test/test-bitPackedArray.C:66: ans ==> and
data/kmer-0~20150903+r2013/libutil/test/test-bitPackedArray.C:87: ans ==> and
data/kmer-0~20150903+r2013/libutil/kazlib/hash.c:147: bookeeping ==> bookkeeping
data/kmer-0~20150903+r2013/libutil/kazlib/sfx.c:642: ambigous ==> ambiguous
data/kmer-0~20150903+r2013/libutil/kazlib/hash.h:99: preferrable ==> preferable
data/kmer-0~20150903+r2013/libutil/kazlib/docs/CHANGES:9: embarassing ==> embarrassing
data/kmer-0~20150903+r2013/libutil/kazlib/docs/CHANGES:41: Tast ==> Taste
data/kmer-0~20150903+r2013/libutil/kazlib/docs/CHANGES:214: ahve ==> have
data/kmer-0~20150903+r2013/libutil/kazlib/docs/CHANGES:287: funtion ==> function
data/kmer-0~20150903+r2013/libutil/mt19937ar/tt800.c:48: corellation ==> correlation
data/kmer-0~20150903+r2013/libseq/sffFile.C:3: ths ==> the, this
data/kmer-0~20150903+r2013/libseq/test-seqStream.C:113: sie ==> size, sigh
data/kmer-0~20150903+r2013/libseq/test-seqStream.C:144: sie ==> size, sigh
data/kmer-0~20150903+r2013/libseq/test-seqStream.C:145: sie ==> size, sigh
data/kmer-0~20150903+r2013/libseq/test-seqStream.C:145: sie ==> size, sigh
data/kmer-0~20150903+r2013/libseq/test-seqStream.C:174: sie ==> size, sigh
data/kmer-0~20150903+r2013/libseq/test-seqStream.C:177: sie ==> size, sigh
data/kmer-0~20150903+r2013/libseq/test-seqStream.C:181: sie ==> size, sigh
data/kmer-0~20150903+r2013/libseq/test-seqStream.C:209: sie ==> size, sigh
data/kmer-0~20150903+r2013/libseq/test-seqStream.C:227: sie ==> size, sigh
data/kmer-0~20150903+r2013/libseq/test-seqStream.C:232: sie ==> size, sigh
data/kmer-0~20150903+r2013/libseq/test-seqStream.C:247: sie ==> size, sigh
data/kmer-0~20150903+r2013/seagen/filterEST.C:165: anythig ==> anything
data/kmer-0~20150903+r2013/seagen/hitMatrix.C:462: nonexistant ==> nonexistent
data/kmer-0~20150903+r2013/seagen/hitMatrix.C:478: nonexistant ==> nonexistent
data/kmer-0~20150903+r2013/seagen/thr-deadlock.C:9: vengance ==> vengeance
data/kmer-0~20150903+r2013/atac-driver/makeplot.pl:30: ot ==> to, of, or
data/kmer-0~20150903+r2013/atac-driver/makeplot.pl:36: ot ==> to, of, or
data/kmer-0~20150903+r2013/atac-driver/makeplot.pl:37: ot ==> to, of, or
data/kmer-0~20150903+r2013/atac-driver/makeplot.pl:39: ot ==> to, of, or
data/kmer-0~20150903+r2013/atac-driver/makeplot.pl:40: ot ==> to, of, or
data/kmer-0~20150903+r2013/atac-driver/makeplot.pl:42: ot ==> to, of, or
data/kmer-0~20150903+r2013/atac-driver/makeplot.pl:43: ot ==> to, of, or
data/kmer-0~20150903+r2013/atac-driver/makeplot.pl:47: ot ==> to, of, or
data/kmer-0~20150903+r2013/atac-driver/makeplot.pl:64: ot ==> to, of, or
data/kmer-0~20150903+r2013/atac-driver/makeplot.pl:65: ot ==> to, of, or
data/kmer-0~20150903+r2013/atac-driver/makeplot.pl:66: ot ==> to, of, or
data/kmer-0~20150903+r2013/atac-driver/makeplot.pl:75: ot ==> to, of, or
data/kmer-0~20150903+r2013/atac-driver/makeplot.pl:129: reseting ==> resetting
data/kmer-0~20150903+r2013/atac-driver/makeplot.pl:400: ot ==> to, of, or
data/kmer-0~20150903+r2013/atac-driver/makeplot.pl:404: ot ==> to, of, or
data/kmer-0~20150903+r2013/atac-driver/makeplot.pl:405: ot ==> to, of, or
data/kmer-0~20150903+r2013/atac-driver/makeplot.pl:409: ot ==> to, of, or
data/kmer-0~20150903+r2013/atac-driver/makeplot.pl:413: ot ==> to, of, or
data/kmer-0~20150903+r2013/atac-driver/makeplot.pl:421: ot ==> to, of, or
data/kmer-0~20150903+r2013/atac-driver/makeplot.pl:426: ot ==> to, of, or
data/kmer-0~20150903+r2013/atac-driver/makeplot.pl:428: ot ==> to, of, or
data/kmer-0~20150903+r2013/atac-driver/makeplot.pl:429: ot ==> to, of, or
data/kmer-0~20150903+r2013/atac-driver/makeplot.pl:430: ot ==> to, of, or
data/kmer-0~20150903+r2013/atac-driver/atac.pl:38: mimimum ==> minimum
data/kmer-0~20150903+r2013/atac-driver/atac.pl:190: mimimum ==> minimum
data/kmer-0~20150903+r2013/atac-driver/atac.pl:195: mimimum ==> minimum
data/kmer-0~20150903+r2013/atac-driver/atac.pl:200: mimimum ==> minimum
data/kmer-0~20150903+r2013/atac-driver/atac.pl:206: mimimum ==> minimum
data/kmer-0~20150903+r2013/atac-driver/atac.pl:336: ot ==> to, of, or
data/kmer-0~20150903+r2013/atac-driver/atac.pl:338: ot ==> to, of, or
data/kmer-0~20150903+r2013/atac-driver/atac.pl:343: ot ==> to, of, or
data/kmer-0~20150903+r2013/atac-driver/atac.pl:822: ganerate ==> generate
data/kmer-0~20150903+r2013/atac-driver/atac.pl:831: ganerate ==> generate
data/kmer-0~20150903+r2013/atac-driver/atac.pl:840: ganerate ==> generate
data/kmer-0~20150903+r2013/atac-driver/gapShifter/gapShifter.C:201: inbetween ==> between, in between
data/kmer-0~20150903+r2013/atac-driver/gapShifter/gapShifter.C:221: inbetween ==> between, in between
data/kmer-0~20150903+r2013/atac-driver/gapShifter/gapShifter.C:349: accesors ==> accessors
data/kmer-0~20150903+r2013/atac-driver/gapShifter/gapShifter.C:666: fle ==> file
data/kmer-0~20150903+r2013/atac-driver/libatac/atacFeature.H:36: strucure ==> structure
data/kmer-0~20150903+r2013/atac-driver/matchExtender/match.H:105: arbirary ==> arbitrary
data/kmer-0~20150903+r2013/atac-driver/matchExtender/matchExtender-func.C:344: minumum ==> minimum
data/kmer-0~20150903+r2013/atac-driver/uniqueFilter/uniqueFilter.C:40: matchs ==> matches
data/kmer-0~20150903+r2013/atac-driver/uniqueFilter/uniqueFilter.C:52: subract ==> subtract
data/kmer-0~20150903+r2013/atac-driver/uniqueFilter/uniqueFilter.C:436: duplicatd ==> duplicated
data/kmer-0~20150903+r2013/atac-driver/chainer/python/AtacDriver.py:219: inital ==> initial
data/kmer-0~20150903+r2013/atac-driver/chainer/python/UniqueFilter.py:87: intevals ==> intervals
data/kmer-0~20150903+r2013/atac-driver/chainer/python/UniqueFilter.py:213: atomicly ==> atomically
data/kmer-0~20150903+r2013/atac-driver/chainer/python/UniqueFilter.py:214: postition ==> position
data/kmer-0~20150903+r2013/atac-driver/chainer/python/UniqueFilter.py:215: postion ==> position
data/kmer-0~20150903+r2013/atac-driver/chainer/localalign/GF_ALN_loverlapper.C:113: begining ==> beginning
data/kmer-0~20150903+r2013/atac-driver/chainer/localalign/GF_ALN_loverlapper.C:490: persistant ==> persistent
data/kmer-0~20150903+r2013/atac-driver/chainer/localalign/GF_ALN_dpaligner.C:24: ND ==> AND, 2ND
data/kmer-0~20150903+r2013/atac-driver/chainer/localalign/GF_ALN_local.H:114: concatentaion ==> concatenation
data/kmer-0~20150903+r2013/atac-driver/chainer/halign/halign.C:142: te ==> the, be, we
data/kmer-0~20150903+r2013/atac-driver/chainer/halign/halign.C:162: te ==> the, be, we
data/kmer-0~20150903+r2013/atac-driver/chainer/halign/halign.C:176: te ==> the, be, we
data/kmer-0~20150903+r2013/atac-driver/chainer/halign/halign.C:249: te ==> the, be, we
data/kmer-0~20150903+r2013/atac-driver/chainer/halign/halign.C:332: te ==> the, be, we
data/kmer-0~20150903+r2013/atac-driver/chainer/halign/halign.C:390: te ==> the, be, we
data/kmer-0~20150903+r2013/atac-driver/alignOverlap/overlap-span.H:75: postition ==> position
data/kmer-0~20150903+r2013/atac-driver/alignOverlap/overlap-stats.H:33: hist ==> heist, his
data/kmer-0~20150903+r2013/atac-driver/alignOverlap/overlap-stats.H:37: hist ==> heist, his
data/kmer-0~20150903+r2013/atac-driver/alignOverlap/overlap-stats.H:40: hist ==> heist, his
data/kmer-0~20150903+r2013/atac-driver/alignOverlap/overlap-stats.H:45: hist ==> heist, his
data/kmer-0~20150903+r2013/atac-driver/alignOverlap/overlap-stats.H:64: hist ==> heist, his
data/kmer-0~20150903+r2013/atac-driver/alignOverlap/overlap-stats.H:69: hist ==> heist, his
data/kmer-0~20150903+r2013/atac-driver/alignOverlap/overlap-matchTree.H:24: Contructs ==> Constructs
data/kmer-0~20150903+r2013/libsim4/sim4polish/sim4polish-stringtopolish.C:178: compain ==> complain
data/kmer-0~20150903+r2013/libsim4/sim4polish/sim4polishWriter.C:57: curent ==> current
data/kmer-0~20150903+r2013/libsim4/sim4polish/sim4polish-compare.C:139: Alo ==> Also
data/kmer-0~20150903+r2013/libsim4/sim4polish/sim4polish-compare.C:144: Alo ==> Also
data/kmer-0~20150903+r2013/libsim4/sim4polish/sim4polish-compare.C:153: Alo ==> Also
data/kmer-0~20150903+r2013/libsim4/sim4polish/sim4polish-compare.C:169: Alo ==> Also
data/kmer-0~20150903+r2013/libsim4/sim4polish/sim4polish-compare.C:176: Alo ==> Also
data/kmer-0~20150903+r2013/libsim4/sim4polish/sim4polish-compare.C:185: Alo ==> Also
data/kmer-0~20150903+r2013/libsim4/sim4polish/sim4polish-compare.C:186: Alo ==> Also
data/kmer-0~20150903+r2013/libsim4/sim4polish/sim4polish-compare.C:186: Alo ==> Also
data/kmer-0~20150903+r2013/libsim4/sim4polish/sim4polish-compare.C:199: Alo ==> Also
data/kmer-0~20150903+r2013/libsim4/sim4polish/sim4polish-compare.C:207: Alo ==> Also
data/kmer-0~20150903+r2013/libsim4/sim4polish/sim4polish-compare.C:213: Alo ==> Also
data/kmer-0~20150903+r2013/libsim4/sim4core/pluri_align.C:44: enew ==> new
data/kmer-0~20150903+r2013/libsim4/sim4core/pluri_align.C:68: enew ==> new
data/kmer-0~20150903+r2013/libsim4/sim4core/pluri_align.C:70: enew ==> new
data/kmer-0~20150903+r2013/libsim4/sim4core/pluri_align.C:268: enew ==> new
data/kmer-0~20150903+r2013/libsim4/sim4core/pluri_align.C:270: enew ==> new
data/kmer-0~20150903+r2013/libsim4/sim4core/pluri_align.C:281: enew ==> new
data/kmer-0~20150903+r2013/libsim4/sim4core/pluri_align.C:283: enew ==> new
data/kmer-0~20150903+r2013/libsim4/sim4core/sim4command.C:156: multple ==> multiple
data/kmer-0~20150903+r2013/libsim4/sim4core/sim4command.H:59: interative ==> interactive
data/kmer-0~20150903+r2013/libsim4/sim4core/mspManager.C:322: mimick ==> mimic
data/kmer-0~20150903+r2013/libsim4/sim4core/sim4string.C:304: incresing ==> increasing
data/kmer-0~20150903+r2013/libsim4/sim4core/sim4string.C:830: Detemine ==> Determine
data/kmer-0~20150903+r2013/libsim4/sim4core/splice.C:421: ue ==> use, due
data/kmer-0~20150903+r2013/libsim4/sim4core/splice.C:462: ue ==> use, due
data/kmer-0~20150903+r2013/libsim4/sim4core/splice.C:466: ue ==> use, due
data/kmer-0~20150903+r2013/libsim4/sim4core/splice.C:470: ue ==> use, due
data/kmer-0~20150903+r2013/libsim4/sim4core/splice.C:475: ue ==> use, due
data/kmer-0~20150903+r2013/libsim4/sim4core/splice.C:567: ue ==> use, due
data/kmer-0~20150903+r2013/libsim4/sim4core/splice.C:623: ue ==> use, due
data/kmer-0~20150903+r2013/libsim4/sim4core/splice.C:702: ue ==> use, due
data/kmer-0~20150903+r2013/libsim4/sim4core/sim4.H:43: infact ==> in fact
data/kmer-0~20150903+r2013/libsim4/sim4core/sim4.H:421: ue ==> use, due
data/kmer-0~20150903+r2013/libsim4/sim4core/sim4.H:426: ue ==> use, due
data/kmer-0~20150903+r2013/libsim4/sim4core/sim4.H:431: ue ==> use, due
data/kmer-0~20150903+r2013/libsim4/sim4core/sim4.H:447: ue ==> use, due
data/kmer-0~20150903+r2013/leaff/leaff.C:51: soruce ==> source, spruce
data/kmer-0~20150903+r2013/meryl/merge.listmerge.C:119: sentinal ==> sentinel
data/kmer-0~20150903+r2013/meryl/merge.listmerge.C:191: sentinal ==> sentinel
data/kmer-0~20150903+r2013/meryl/build.C:753: contructing ==> constructing
data/kmer-0~20150903+r2013/meryl/mapMers.C:109: hist ==> heist, his
data/kmer-0~20150903+r2013/meryl/mapMers.C:121: hist ==> heist, his
data/kmer-0~20150903+r2013/meryl/mapMers.C:140: hist ==> heist, his
data/kmer-0~20150903+r2013/meryl/mapMers.C:140: hist ==> heist, his
data/kmer-0~20150903+r2013/meryl/mapMers.C:140: hist ==> heist, his
data/kmer-0~20150903+r2013/meryl/mapMers.C:140: hist ==> heist, his
data/kmer-0~20150903+r2013/meryl/mapMers.C:140: hist ==> heist, his
data/kmer-0~20150903+r2013/meryl/mapMers.C:140: hist ==> heist, his
data/kmer-0~20150903+r2013/meryl/mapMers.C:140: hist ==> heist, his
data/kmer-0~20150903+r2013/meryl/mapMers.C:140: hist ==> heist, his
data/kmer-0~20150903+r2013/meryl/mapMers.C:141: hist ==> heist, his
data/kmer-0~20150903+r2013/meryl/mapMers.C:141: hist ==> heist, his
data/kmer-0~20150903+r2013/meryl/mapMers.C:141: hist ==> heist, his
data/kmer-0~20150903+r2013/meryl/mapMers.C:141: hist ==> heist, his
data/kmer-0~20150903+r2013/meryl/mapMers.C:141: hist ==> heist, his
data/kmer-0~20150903+r2013/meryl/mapMers.C:141: hist ==> heist, his
data/kmer-0~20150903+r2013/meryl/mapMers.C:141: hist ==> heist, his
data/kmer-0~20150903+r2013/meryl/mapMers.C:141: hist ==> heist, his
data/kmer-0~20150903+r2013/meryl/dump.C:95: hist ==> heist, his
data/kmer-0~20150903+r2013/meryl/dump.C:97: hist ==> heist, his
data/kmer-0~20150903+r2013/meryl/dump.C:98: hist ==> heist, his
data/kmer-0~20150903+r2013/meryl/dump.C:99: hist ==> heist, his
data/kmer-0~20150903+r2013/meryl/dump.C:103: hist ==> heist, his
data/kmer-0~20150903+r2013/meryl/dump.C:122: hist ==> heist, his
data/kmer-0~20150903+r2013/meryl/dump.C:134: hist ==> heist, his
data/kmer-0~20150903+r2013/meryl/dump.C:143: hist ==> heist, his
data/kmer-0~20150903+r2013/meryl/dump.C:147: hist ==> heist, his
data/kmer-0~20150903+r2013/meryl/dump.C:148: hist ==> heist, his
data/kmer-0~20150903+r2013/meryl/dump.C:154: hist ==> heist, his
data/kmer-0~20150903+r2013/libbio/kmer.H:130: Similarily ==> Similarly
data/kmer-0~20150903+r2013/seatac/hitMatrix.C:13: mamalian ==> mammalian
data/kmer-0~20150903+r2013/seatac/hitMatrix.C:151: FO ==> OF, FOR
data/kmer-0~20150903+r2013/seatac/hitMatrix.H:53: FO ==> OF, FOR
data/kmer-0~20150903+r2013/seatac/statObj.H:14: FO ==> OF, FOR
data/kmer-0~20150903+r2013/seatac/seatac.C:75: postions ==> positions
data/kmer-0~20150903+r2013/seatac/heavychains.H:26: selfS ==> self
data/kmer-0~20150903+r2013/seatac/heavychains.H:38: selfS ==> self
data/kmer-0~20150903+r2013/seatac/heavychains.H:362: selfS ==> self
data/kmer-0~20150903+r2013/seatac/thr-deadlock.C:5: vengance ==> vengeance
data/kmer-0~20150903+r2013/seatac/heavychains.C:65: selfS ==> self
data/kmer-0~20150903+r2013/seatac/heavychains.C:67: selfS ==> self
data/kmer-0~20150903+r2013/seatac/heavychains.C:153: selfS ==> self
data/kmer-0~20150903+r2013/seatac/heavychains.C:154: selfS ==> self
data/kmer-0~20150903+r2013/seatac/thr-search.C:38: FO ==> OF, FOR
data/kmer-0~20150903+r2013/seatac/thr-search.C:66: FO ==> OF, FOR
data/kmer-0~20150903+r2013/seatac/thr-search.C:137: FO ==> OF, FOR
data/kmer-0~20150903+r2013/seatac/thr-search.C:142: FO ==> OF, FOR
data/kmer-0~20150903+r2013/seatac/thr-search.C:144: FO ==> OF, FOR
data/kmer-0~20150903+r2013/seatac/thr-search.C:152: FO ==> OF, FOR
data/kmer-0~20150903+r2013/sim4dbutils/trimExons.C:93: frist ==> first
data/kmer-0~20150903+r2013/sim4dbutils/trimExons.C:162: circularly ==> circular
data/kmer-0~20150903+r2013/sim4dbutils/realignPolishes.C:134: cehck ==> check
data/kmer-0~20150903+r2013/sim4dbutils/LOG:16: te ==> the, be, we
data/kmer-0~20150903+r2013/sim4dbutils/convertToAtac.C:324: alignemnt ==> alignment
data/kmer-0~20150903+r2013/sim4dbutils/plotIntronSize.C:19: hist ==> heist, his
data/kmer-0~20150903+r2013/sim4dbutils/plotIntronSize.C:53: hist ==> heist, his
data/kmer-0~20150903+r2013/sim4dbutils/plotIntronSize.C:54: hist ==> heist, his
data/kmer-0~20150903+r2013/sim4dbutils/plotIntronSize.C:69: hist ==> heist, his
data/kmer-0~20150903+r2013/sim4dbutils/plotIntronSize.C:73: hist ==> heist, his
data/kmer-0~20150903+r2013/sim4dbutils/plotIntronSize.C:86: hist ==> heist, his
data/kmer-0~20150903+r2013/sim4dbutils/plotIntronSize.C:89: hist ==> heist, his
data/kmer-0~20150903+r2013/sim4dbutils/plotIntronSize.C:94: hist ==> heist, his
data/kmer-0~20150903+r2013/sim4dbutils/plotIntronSize.C:97: hist ==> heist, his
data/kmer-0~20150903+r2013/sim4dbutils/plotIntronSize.C:101: hist ==> heist, his
data/kmer-0~20150903+r2013/sim4dbutils/cleanPolishes-experiments/evalThresh.ps:202: BoxE ==> boxes, box, boxer
data/kmer-0~20150903+r2013/libkmer/existDB-create-from-sequence.C:147: initialied ==> initialized
data/kmer-0~20150903+r2013/libkmer/existDB-create-from-fasta.C:147: initialied ==> initialized
data/kmer-0~20150903+r2013/libkmer/positionDB-sort.C:86: chck ==> check
data/kmer-0~20150903+r2013/libkmer/positionDB-file.C:11: faild ==> failed
data/kmer-0~20150903+r2013/libkmer/positionDB-file.C:39: faild ==> failed
data/kmer-0~20150903+r2013/libkmer/positionDB-file.C:121: faild ==> failed
data/kmer-0~20150903+r2013/libkmer/existDB-create-from-meryl.C:146: initialied ==> initialized
data/kmer-0~20150903+r2013/libkmer/positionDB-mismatch.C:361: chck ==> check
data/kmer-0~20150903+r2013/libkmer/positionDB-mismatch.C:367: chck ==> check
data/kmer-0~20150903+r2013/libkmer/positionDB-mismatch.C:368: chck ==> check
data/kmer-0~20150903+r2013/libkmer/positionDB-mismatch.C:374: chck ==> check
data/kmer-0~20150903+r2013/libkmer/positionDB.C:516: CHCK ==> CHECK
data/kmer-0~20150903+r2013/libkmer/positionDB.C:762: occurrance ==> occurrence
data/kmer-0~20150903+r2013/snapper/snapper2.C:195: Allright ==> All right, alright
data/kmer-0~20150903+r2013/snapper/thr-polish-dp.C:428: truely ==> truly
data/kmer-0~20150903+r2013/snapper/thr-polish.C:273: wil ==> will, well
data/kmer-0~20150903+r2013/snapper/eval/domap14.sh:18: workd ==> worked
data/kmer-0~20150903+r2013/snapper/eval/domap14.sh:55: workd ==> worked
data/kmer-0~20150903+r2013/snapper/eval/domap14.sh:68: workd ==> worked
data/kmer-0~20150903+r2013/snapper/eval/domap14.sh:69: workd ==> worked
data/kmer-0~20150903+r2013/snapper/eval/domap14.sh:71: workd ==> worked
data/kmer-0~20150903+r2013/snapper/eval/domap14.sh:72: workd ==> worked
data/kmer-0~20150903+r2013/snapper/eval/domap14.sh:86: workd ==> worked
data/kmer-0~20150903+r2013/snapper/eval/domap14.sh:88: workd ==> worked
data/kmer-0~20150903+r2013/snapper/eval/domap14.sh:90: workd ==> worked
data/kmer-0~20150903+r2013/ESTmapper LaTeX/mrna-filter.ps:37: nd ==> and, 2nd
data/kmer-0~20150903+r2013/ESTmapper LaTeX/mrna-filter.ps:43: nd ==> and, 2nd
data/kmer-0~20150903+r2013/ESTmapper LaTeX/mrna-filter.ps:44: nd ==> and, 2nd
data/kmer-0~20150903+r2013/ESTmapper LaTeX/mrna-filter.ps:44: nd ==> and, 2nd
data/kmer-0~20150903+r2013/ESTmapper LaTeX/mrna-filter.ps:44: nd ==> and, 2nd
data/kmer-0~20150903+r2013/ESTmapper LaTeX/mrna-filter.ps:44: nd ==> and, 2nd
data/kmer-0~20150903+r2013/ESTmapper LaTeX/mrna-filter.ps:45: nd ==> and, 2nd
data/kmer-0~20150903+r2013/ESTmapper LaTeX/mrna-filter.ps:45: nd ==> and, 2nd
data/kmer-0~20150903+r2013/ESTmapper LaTeX/mrna-filter.ps:703: whic ==> which
data/kmer-0~20150903+r2013/ESTmapper LaTeX/mrna-filter.ps:704: matc ==> match
data/kmer-0~20150903+r2013/ESTmapper LaTeX/mrna-filter.ps:710: Matc ==> Match
data/kmer-0~20150903+r2013/ESTmapper LaTeX/mrna-filter.ps:710: matc ==> match
data/kmer-0~20150903+r2013/ESTmapper LaTeX/mrna-filter.ps:720: matc ==> match
data/kmer-0~20150903+r2013/ESTmapper LaTeX/blurb:24: environement ==> environment
data/kmer-0~20150903+r2013/ESTmapper LaTeX/blurb:28: sensivity ==> sensitivity, sensitively
data/kmer-0~20150903+r2013/ESTmapper LaTeX/ESTmapper.tex:11: mathematican ==> mathematician
data/kmer-0~20150903+r2013/ESTmapper LaTeX/ESTmapper.tex:121: sensivity ==> sensitivity, sensitively
data/kmer-0~20150903+r2013/ESTmapper LaTeX/ESTmapper.tex:376: ouptut ==> output
data/kmer-0~20150903+r2013/tapper/tapper.C:222: actaully ==> actually
data/kmer-0~20150903+r2013/tapper/tapperResult.H:54: deterine ==> determine
data/kmer-0~20150903+r2013/tapper/tapperTag.H:9: upto ==> up to
data/kmer-0~20150903+r2013/ESTmapper/ESTmapper.pl:120: depricated ==> deprecated
data/kmer-0~20150903+r2013/ESTmapper/ESTmapper.pl:121: depricated ==> deprecated
data/kmer-0~20150903+r2013/ESTmapper/ESTmapper.pl:126: depricated ==> deprecated
data/kmer-0~20150903+r2013/ESTmapper/ESTmapper.pl:269: configration ==> configuration
data/kmer-0~20150903+r2013/ESTmapper/ESTmapper.pl:479: everytime ==> every time
data/kmer-0~20150903+r2013/ESTmapper/ESTmapper.pl:1090: compatable ==> compatible
data/kmer-0~20150903+r2013/debian/changelog:8: adjustements ==> adjustments
data/kmer-0~20150903+r2013/debian/libkmer-dev.install:11: endianess ==> endianness
data/kmer-0~20150903+r2013/debian/patches/atac-helper-script-paths.patch:29: mimimum ==> minimum
data/kmer-0~20150903+r2013/debian/patches/spelling.patch:11: endianess ==> endianness
data/kmer-0~20150903+r2013/debian/patches/spelling.patch:22: existance ==> existence
data/kmer-0~20150903+r2013/debian/patches/spelling.patch:33: Inital ==> Initial
data/kmer-0~20150903+r2013/debian/patches/spelling.patch:44: occurance ==> occurrence
data/kmer-0~20150903+r2013/debian/patches/spelling.patch:55: parititions ==> partitions
data/kmer-0~20150903+r2013/.pc/atac-helper-script-paths.patch/atac-driver/atac.pl:37: mimimum ==> minimum
data/kmer-0~20150903+r2013/.pc/atac-helper-script-paths.patch/atac-driver/atac.pl:189: mimimum ==> minimum
data/kmer-0~20150903+r2013/.pc/atac-helper-script-paths.patch/atac-driver/atac.pl:194: mimimum ==> minimum
data/kmer-0~20150903+r2013/.pc/atac-helper-script-paths.patch/atac-driver/atac.pl:199: mimimum ==> minimum
data/kmer-0~20150903+r2013/.pc/atac-helper-script-paths.patch/atac-driver/atac.pl:205: mimimum ==> minimum
data/kmer-0~20150903+r2013/.pc/atac-helper-script-paths.patch/atac-driver/atac.pl:335: ot ==> to, of, or
data/kmer-0~20150903+r2013/.pc/atac-helper-script-paths.patch/atac-driver/atac.pl:337: ot ==> to, of, or
data/kmer-0~20150903+r2013/.pc/atac-helper-script-paths.patch/atac-driver/atac.pl:342: ot ==> to, of, or
data/kmer-0~20150903+r2013/.pc/atac-helper-script-paths.patch/atac-driver/atac.pl:821: ganerate ==> generate
data/kmer-0~20150903+r2013/.pc/atac-helper-script-paths.patch/atac-driver/atac.pl:830: ganerate ==> generate
data/kmer-0~20150903+r2013/.pc/atac-helper-script-paths.patch/atac-driver/atac.pl:839: ganerate ==> generate
data/kmer-0~20150903+r2013/.pc/spelling.patch/libutil/bitPackedFile.C:86: endianess ==> endianness
data/kmer-0~20150903+r2013/.pc/spelling.patch/libutil/bitPackedFile.C:106: endianess ==> endianness
data/kmer-0~20150903+r2013/.pc/spelling.patch/libutil/bitPackedFile.C:152: endianess ==> endianness
data/kmer-0~20150903+r2013/.pc/spelling.patch/libutil/bitPackedFile.C:160: endianess ==> endianness
data/kmer-0~20150903+r2013/.pc/spelling.patch/libutil/palloc.c:136: Inital ==> Initial
data/kmer-0~20150903+r2013/.pc/spelling.patch/libkmer/driver-existDB.C:181: existance ==> existence
data/kmer-0~20150903+r2013/.pc/spelling.patch/sim4dbutils/parseSNP.C:494: occurance ==> occurrence
data/kmer-0~20150903+r2013/.pc/spelling.patch/leaff/leaff.C:51: soruce ==> source, spruce
data/kmer-0~20150903+r2013/.pc/spelling.patch/leaff/leaff.C:129: parititions ==> partitions
data/kmer-0~20150903+r2013/.pc/2to3.patch/Makefile.wiki:4: buld ==> build
data/kmer-0~20150903+r2013/.pc/2to3.patch/Makefile.wiki:12: referrenced ==> referenced
data/kmer-0~20150903+r2013/.pc/2to3.patch/Makefile.wiki:170: imediately ==> immediately
data/kmer-0~20150903+r2013/.pc/2to3.patch/Makefile.wiki:285: imediate ==> immediate
data/kmer-0~20150903+r2013/.pc/2to3.patch/Makefile.wiki:296: imediately ==> immediately
data/kmer-0~20150903+r2013/.pc/2to3.patch/Makefile.wiki:862: whcih ==> which
data/kmer-0~20150903+r2013/.pc/2to3.patch/Makefile.wiki:865: guarranteed ==> guaranteed
data/kmer-0~20150903+r2013/.pc/2to3.patch/Makefile.wiki:1213: auxilliary ==> auxiliary
data/kmer-0~20150903+r2013/.pc/2to3.patch/atac-driver/atac.pl:38: mimimum ==> minimum
data/kmer-0~20150903+r2013/.pc/2to3.patch/atac-driver/atac.pl:190: mimimum ==> minimum
data/kmer-0~20150903+r2013/.pc/2to3.patch/atac-driver/atac.pl:195: mimimum ==> minimum
data/kmer-0~20150903+r2013/.pc/2to3.patch/atac-driver/atac.pl:200: mimimum ==> minimum
data/kmer-0~20150903+r2013/.pc/2to3.patch/atac-driver/atac.pl:206: mimimum ==> minimum
data/kmer-0~20150903+r2013/.pc/2to3.patch/atac-driver/atac.pl:336: ot ==> to, of, or
data/kmer-0~20150903+r2013/.pc/2to3.patch/atac-driver/atac.pl:338: ot ==> to, of, or
data/kmer-0~20150903+r2013/.pc/2to3.patch/atac-driver/atac.pl:343: ot ==> to, of, or
data/kmer-0~20150903+r2013/.pc/2to3.patch/atac-driver/atac.pl:822: ganerate ==> generate
data/kmer-0~20150903+r2013/.pc/2to3.patch/atac-driver/atac.pl:831: ganerate ==> generate
data/kmer-0~20150903+r2013/.pc/2to3.patch/atac-driver/atac.pl:840: ganerate ==> generate
data/kmer-0~20150903+r2013/.pc/2to3.patch/atac-driver/chainer/python/AtacDriver.py:222: inital ==> initial
data/kmer-0~20150903+r2013/.pc/2to3.patch/atac-driver/chainer/python/UniqueFilter.py:87: intevals ==> intervals
data/kmer-0~20150903+r2013/.pc/2to3.patch/atac-driver/chainer/python/UniqueFilter.py:213: atomicly ==> atomically
data/kmer-0~20150903+r2013/.pc/2to3.patch/atac-driver/chainer/python/UniqueFilter.py:214: postition ==> position
data/kmer-0~20150903+r2013/.pc/2to3.patch/atac-driver/chainer/python/UniqueFilter.py:215: postion ==> position