data/libbpp-core-2.4.1/COPYING.txt:343: therefor ==> therefore
data/libbpp-core-2.4.1/ChangeLog:44: formating ==> formatting
data/libbpp-core-2.4.1/Doxyfile:1078: therefor ==> therefore
data/libbpp-core-2.4.1/bpp-core.spec:96: assigment ==> assignment
data/libbpp-core-2.4.1/bpp_format.py:536: ans ==> and
data/libbpp-core-2.4.1/bpp_format.py:537: ans ==> and
data/libbpp-core-2.4.1/cmake/doc-cmake-for-developpers.cmake:243: explicitely ==> explicitly
data/libbpp-core-2.4.1/src/Bpp/Clonable.h:82: differenciation ==> differentiation
data/libbpp-core-2.4.1/src/Bpp/App/ApplicationTools.h:315: programm ==> program, programme
data/libbpp-core-2.4.1/src/Bpp/App/ApplicationTools.h:539: begining ==> beginning
data/libbpp-core-2.4.1/src/Bpp/App/ApplicationTools.h:555: begining ==> beginning
data/libbpp-core-2.4.1/src/Bpp/App/NumCalcApplicationTools.cpp:80: Unvalid ==> Invalid
data/libbpp-core-2.4.1/src/Bpp/App/NumCalcApplicationTools.cpp:81: Unvalid ==> Invalid
data/libbpp-core-2.4.1/src/Bpp/App/NumCalcApplicationTools.cpp:83: Unvalid ==> Invalid
data/libbpp-core-2.4.1/src/Bpp/App/NumCalcApplicationTools.h:81: wheras ==> whereas
data/libbpp-core-2.4.1/src/Bpp/Graph/AssociationGraphObserver.h:136: Detroys ==> Destroys
data/libbpp-core-2.4.1/src/Bpp/Graph/DAGraphImpl.h:76: unvalidate ==> invalidate
data/libbpp-core-2.4.1/src/Bpp/Graph/GlobalGraph.cpp:774: wih ==> with
data/libbpp-core-2.4.1/src/Bpp/Graph/GlobalGraph.h:116: Usualy ==> Usually
data/libbpp-core-2.4.1/src/Bpp/Graph/GlobalGraph.h:292: arbritrary ==> arbitrary
data/libbpp-core-2.4.1/src/Bpp/Graph/Graph.h:53: dependancies ==> dependencies
data/libbpp-core-2.4.1/src/Bpp/Graph/Graph.h:93: arbritrary ==> arbitrary
data/libbpp-core-2.4.1/src/Bpp/Graph/TreeGraph.h:171: algorithmical ==> algorithmically
data/libbpp-core-2.4.1/src/Bpp/Graph/TreeGraphImpl.h:68: unvalidate ==> invalidate
data/libbpp-core-2.4.1/src/Bpp/Graph/TreeGraphImpl.h:217: algorithmical ==> algorithmically
data/libbpp-core-2.4.1/src/Bpp/Graphics/Point2D.h:113: objets ==> objects
data/libbpp-core-2.4.1/src/Bpp/Graphics/Point2D.h:126: methode ==> method
data/libbpp-core-2.4.1/src/Bpp/Graphics/RgbColor.h:54: componants ==> components
data/libbpp-core-2.4.1/src/Bpp/Graphics/RgbColor.h:102: componant ==> component
data/libbpp-core-2.4.1/src/Bpp/Graphics/RgbColor.h:113: componant ==> component
data/libbpp-core-2.4.1/src/Bpp/Graphics/Font/FontManager.h:8: Developement ==> Development
data/libbpp-core-2.4.1/src/Bpp/Graphics/Latex/PgfGraphicDevice.cpp:100: Althought ==> Although
data/libbpp-core-2.4.1/src/Bpp/Io/BppODiscreteDistributionFormat.cpp:320: nd ==> and, 2nd
data/libbpp-core-2.4.1/src/Bpp/Io/BppODiscreteDistributionFormat.cpp:321: nd ==> and, 2nd
data/libbpp-core-2.4.1/src/Bpp/Io/BppODiscreteDistributionFormat.cpp:330: nd ==> and, 2nd
data/libbpp-core-2.4.1/src/Bpp/Io/BppODiscreteDistributionFormat.cpp:333: nd ==> and, 2nd
data/libbpp-core-2.4.1/src/Bpp/Io/BppODiscreteDistributionFormat.cpp:337: nd ==> and, 2nd
data/libbpp-core-2.4.1/src/Bpp/Io/BppODiscreteDistributionFormat.cpp:369: nd ==> and, 2nd
data/libbpp-core-2.4.1/src/Bpp/Io/BppODiscreteDistributionFormat.cpp:373: nd ==> and, 2nd
data/libbpp-core-2.4.1/src/Bpp/Io/BppODiscreteDistributionFormat.cpp:376: nd ==> and, 2nd
data/libbpp-core-2.4.1/src/Bpp/Io/BppODiscreteDistributionFormat.cpp:380: nd ==> and, 2nd
data/libbpp-core-2.4.1/src/Bpp/Io/BppODiscreteDistributionFormat.cpp:383: nd ==> and, 2nd
data/libbpp-core-2.4.1/src/Bpp/Io/BppODiscreteDistributionFormat.cpp:404: nd ==> and, 2nd
data/libbpp-core-2.4.1/src/Bpp/Io/BppODiscreteDistributionFormat.cpp:408: nd ==> and, 2nd
data/libbpp-core-2.4.1/src/Bpp/Io/BppODiscreteDistributionFormat.h:51: Progam ==> Program
data/libbpp-core-2.4.1/src/Bpp/Io/BppODiscreteDistributionFormat.h:88: occured ==> occurred
data/libbpp-core-2.4.1/src/Bpp/Io/BppOParametrizableFormat.h:52: Progam ==> Program
data/libbpp-core-2.4.1/src/Bpp/Io/FileTools.cpp:110: delte ==> delete
data/libbpp-core-2.4.1/src/Bpp/Io/FileTools.h:58: seprator ==> separator
data/libbpp-core-2.4.1/src/Bpp/Io/FileTools.h:65: pathes ==> paths
data/libbpp-core-2.4.1/src/Bpp/Io/FileTools.h:122: directry ==> directory
data/libbpp-core-2.4.1/src/Bpp/Io/FileTools.h:126: dthe ==> the
data/libbpp-core-2.4.1/src/Bpp/Io/IoDiscreteDistribution.h:81: occured ==> occurred
data/libbpp-core-2.4.1/src/Bpp/Io/IoDiscreteDistribution.h:113: occured ==> occurred
data/libbpp-core-2.4.1/src/Bpp/Io/OutputStream.h:59: outputing ==> outputting
data/libbpp-core-2.4.1/src/Bpp/Io/OutputStream.h:129: swich ==> switch
data/libbpp-core-2.4.1/src/Bpp/Numeric/AdaptiveKernelDensityEstimation.h:77: contianing ==> containing
data/libbpp-core-2.4.1/src/Bpp/Numeric/AdaptiveKernelDensityEstimation.h:78: wich ==> which
data/libbpp-core-2.4.1/src/Bpp/Numeric/AdaptiveKernelDensityEstimation.h:81: adjustement ==> adjustment
data/libbpp-core-2.4.1/src/Bpp/Numeric/AdaptiveKernelDensityEstimation.h:82: bandwith ==> bandwidth
data/libbpp-core-2.4.1/src/Bpp/Numeric/AutoParameter.h:54: overides ==> overrides
data/libbpp-core-2.4.1/src/Bpp/Numeric/AutoParameter.h:74: contraint ==> constraint
data/libbpp-core-2.4.1/src/Bpp/Numeric/AutoParameter.h:113: whith ==> with
data/libbpp-core-2.4.1/src/Bpp/Numeric/Constraints.h:99: retruned ==> returned
data/libbpp-core-2.4.1/src/Bpp/Numeric/DataTable.h:439: explicitely ==> explicitly
data/libbpp-core-2.4.1/src/Bpp/Numeric/NumConstants.h:51: classe ==> class, classes
data/libbpp-core-2.4.1/src/Bpp/Numeric/Parameter.h:83: Imlementing ==> Implementing
data/libbpp-core-2.4.1/src/Bpp/Numeric/Parameter.h:119: optionaly ==> optionally
data/libbpp-core-2.4.1/src/Bpp/Numeric/Parameter.h:140: contructor ==> constructor
data/libbpp-core-2.4.1/src/Bpp/Numeric/Parameter.h:154: contraint ==> constraint
data/libbpp-core-2.4.1/src/Bpp/Numeric/Parameter.h:165: contraint ==> constraint
data/libbpp-core-2.4.1/src/Bpp/Numeric/Parameter.h:250: contraint ==> constraint
data/libbpp-core-2.4.1/src/Bpp/Numeric/Parameter.h:257: contraint ==> constraint
data/libbpp-core-2.4.1/src/Bpp/Numeric/Parameter.h:257: objet ==> object
data/libbpp-core-2.4.1/src/Bpp/Numeric/Parameter.h:259: contraint ==> constraint
data/libbpp-core-2.4.1/src/Bpp/Numeric/ParameterAliasable.h:75: indepedent ==> independent
data/libbpp-core-2.4.1/src/Bpp/Numeric/ParameterExceptions.h:77: explicitely ==> explicitly
data/libbpp-core-2.4.1/src/Bpp/Numeric/ParameterList.h:273: paramters ==> parameters
data/libbpp-core-2.4.1/src/Bpp/Numeric/ParametrizableCollection.h:248: paramters ==> parameters
data/libbpp-core-2.4.1/src/Bpp/Numeric/Range.h:151: instanciated ==> instantiated
data/libbpp-core-2.4.1/src/Bpp/Numeric/Range.h:192: begining ==> beginning
data/libbpp-core-2.4.1/src/Bpp/Numeric/Range.h:206: discribing ==> describing
data/libbpp-core-2.4.1/src/Bpp/Numeric/Table.h:633: sting ==> string
data/libbpp-core-2.4.1/src/Bpp/Numeric/Table.h:1060: explicitely ==> explicitly
data/libbpp-core-2.4.1/src/Bpp/Numeric/TableExceptions.h:161: Excpetion ==> Exception
data/libbpp-core-2.4.1/src/Bpp/Numeric/TransformedParameter.h:70: orignal ==> original
data/libbpp-core-2.4.1/src/Bpp/Numeric/TransformedParameter.h:78: orignal ==> original
data/libbpp-core-2.4.1/src/Bpp/Numeric/TransformedParameter.h:100: tranformation ==> transformation
data/libbpp-core-2.4.1/src/Bpp/Numeric/TransformedParameter.h:130: orginal ==> original
data/libbpp-core-2.4.1/src/Bpp/Numeric/TransformedParameter.h:194: tranformation ==> transformation
data/libbpp-core-2.4.1/src/Bpp/Numeric/TransformedParameter.h:220: orginal ==> original
data/libbpp-core-2.4.1/src/Bpp/Numeric/VectorExceptions.h:79: occured ==> occurred
data/libbpp-core-2.4.1/src/Bpp/Numeric/VectorTools.h:406: begining ==> beginning
data/libbpp-core-2.4.1/src/Bpp/Numeric/VectorTools.h:427: occurence ==> occurrence
data/libbpp-core-2.4.1/src/Bpp/Numeric/VectorTools.h:447: occurences ==> occurrences
data/libbpp-core-2.4.1/src/Bpp/Numeric/VectorTools.h:1966: repetion ==> repetition
data/libbpp-core-2.4.1/src/Bpp/Numeric/Function/AbstractOptimizer.cpp:199: bizare ==> bizarre
data/libbpp-core-2.4.1/src/Bpp/Numeric/Function/AbstractOptimizer.h:52: contraints ==> constraints
data/libbpp-core-2.4.1/src/Bpp/Numeric/Function/AbstractOptimizer.h:55: ot ==> to, of, or
data/libbpp-core-2.4.1/src/Bpp/Numeric/Function/AbstractOptimizer.h:97: stoping ==> stopping
data/libbpp-core-2.4.1/src/Bpp/Numeric/Function/AbstractOptimizer.h:102: stoping ==> stopping
data/libbpp-core-2.4.1/src/Bpp/Numeric/Function/AbstractOptimizer.h:114: feeded ==> fed
data/libbpp-core-2.4.1/src/Bpp/Numeric/Function/AbstractOptimizer.h:186: untill ==> until
data/libbpp-core-2.4.1/src/Bpp/Numeric/Function/BrentOneDimension.h:109: reseting ==> resetting
data/libbpp-core-2.4.1/src/Bpp/Numeric/Function/BrentOneDimension.h:128: intial ==> initial
data/libbpp-core-2.4.1/src/Bpp/Numeric/Function/FivePointsNumericalDerivative.h:65: foreward ==> foreword, forward
data/libbpp-core-2.4.1/src/Bpp/Numeric/Function/Functions.h:61: objet ==> object
data/libbpp-core-2.4.1/src/Bpp/Numeric/Function/Functions.h:82: convinience ==> convenience
data/libbpp-core-2.4.1/src/Bpp/Numeric/Function/Functions.h:106: occured ==> occurred
data/libbpp-core-2.4.1/src/Bpp/Numeric/Function/Functions.h:115: occured ==> occurred
data/libbpp-core-2.4.1/src/Bpp/Numeric/Function/Functions.h:159: occured ==> occurred
data/libbpp-core-2.4.1/src/Bpp/Numeric/Function/Functions.h:170: occured ==> occurred
data/libbpp-core-2.4.1/src/Bpp/Numeric/Function/Functions.h:215: occured ==> occurred
data/libbpp-core-2.4.1/src/Bpp/Numeric/Function/Functions.h:226: occured ==> occurred
data/libbpp-core-2.4.1/src/Bpp/Numeric/Function/Functions.h:241: occured ==> occurred
data/libbpp-core-2.4.1/src/Bpp/Numeric/Function/Functions.h:253: occured ==> occurred
data/libbpp-core-2.4.1/src/Bpp/Numeric/Function/Functions.h:593: funciton ==> function
data/libbpp-core-2.4.1/src/Bpp/Numeric/Function/GoldenSectionSearch.h:108: reseting ==> resetting
data/libbpp-core-2.4.1/src/Bpp/Numeric/Function/GoldenSectionSearch.h:125: intial ==> initial
data/libbpp-core-2.4.1/src/Bpp/Numeric/Function/MetaOptimizer.h:174: applyied ==> applied
data/libbpp-core-2.4.1/src/Bpp/Numeric/Function/NewtonOneDimension.cpp:84: personnal ==> personal
data/libbpp-core-2.4.1/src/Bpp/Numeric/Function/OptimizationStopCondition.h:55: objet ==> object
data/libbpp-core-2.4.1/src/Bpp/Numeric/Function/OptimizationStopCondition.h:136: objet ==> object
data/libbpp-core-2.4.1/src/Bpp/Numeric/Function/Optimizer.h:53: occured ==> occurred
data/libbpp-core-2.4.1/src/Bpp/Numeric/Function/Optimizer.h:140: occured ==> occurred
data/libbpp-core-2.4.1/src/Bpp/Numeric/Function/Optimizer.h:153: occured ==> occurred
data/libbpp-core-2.4.1/src/Bpp/Numeric/Function/Optimizer.h:176: untill ==> until
data/libbpp-core-2.4.1/src/Bpp/Numeric/Function/Optimizer.h:179: occured ==> occurred
data/libbpp-core-2.4.1/src/Bpp/Numeric/Function/Optimizer.h:205: funciton ==> function
data/libbpp-core-2.4.1/src/Bpp/Numeric/Function/Optimizer.h:205: associatied ==> associated
data/libbpp-core-2.4.1/src/Bpp/Numeric/Function/ThreePointsNumericalDerivative.h:65: foreward ==> foreword, forward
data/libbpp-core-2.4.1/src/Bpp/Numeric/Function/TwoPointsNumericalDerivative.h:103: avalaible ==> available
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/AbstractHmmTransitionMatrix.cpp:49: alph ==> alpha
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/AbstractHmmTransitionMatrix.cpp:50: alph ==> alpha
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/AbstractHmmTransitionMatrix.h:71: alph ==> alpha
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/AbstractHmmTransitionMatrix.h:89: uncorrect ==> incorrect
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/AutoCorrelationTransitionMatrix.cpp:50: alph ==> alpha
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/AutoCorrelationTransitionMatrix.cpp:51: alph ==> alpha
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/AutoCorrelationTransitionMatrix.h:71: alph ==> alpha
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/FullHmmTransitionMatrix.cpp:50: alph ==> alpha
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/FullHmmTransitionMatrix.cpp:51: alph ==> alpha
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/FullHmmTransitionMatrix.h:75: alph ==> alpha
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/HmmEmissionProbabilities.h:57: conditionned ==> conditioned
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/HmmEmissionProbabilities.h:75: uncorrect ==> incorrect
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/HmmExceptions.h:49: unvalid ==> invalid
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/HmmExceptions.h:66: unvalid ==> invalid
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/HmmLikelihood.h:74: conditionnal ==> conditional
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/HmmTransitionMatrix.h:48: Fron ==> From
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/HmmTransitionMatrix.h:73: uncorrect ==> incorrect
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.h:58: developped ==> developed
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.h:135: objet ==> object
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.h:147: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.h:148: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.h:149: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.h:153: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.h:154: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.h:155: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.h:156: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.h:157: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.h:158: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.h:159: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.h:160: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.h:161: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.h:162: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.h:163: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.h:164: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.h:165: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.h:169: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.h:170: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.h:171: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.h:175: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.h:176: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.h:177: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.h:185: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.h:187: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.h:188: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.h:190: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.h:194: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.h:195: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.h:196: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.h:200: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.h:201: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.h:202: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.h:205: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.h:206: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.h:207: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.h:208: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.h:209: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.h:210: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.h:211: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.h:212: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.h:213: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.h:214: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.h:215: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LogsumHmmLikelihood.h:216: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LowMemoryRescaledHmmLikelihood.h:98: objet ==> object
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LowMemoryRescaledHmmLikelihood.h:115: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LowMemoryRescaledHmmLikelihood.h:116: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LowMemoryRescaledHmmLikelihood.h:117: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LowMemoryRescaledHmmLikelihood.h:118: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LowMemoryRescaledHmmLikelihood.h:119: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LowMemoryRescaledHmmLikelihood.h:120: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LowMemoryRescaledHmmLikelihood.h:121: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LowMemoryRescaledHmmLikelihood.h:122: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LowMemoryRescaledHmmLikelihood.h:123: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LowMemoryRescaledHmmLikelihood.h:124: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LowMemoryRescaledHmmLikelihood.h:125: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LowMemoryRescaledHmmLikelihood.h:126: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LowMemoryRescaledHmmLikelihood.h:127: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LowMemoryRescaledHmmLikelihood.h:134: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LowMemoryRescaledHmmLikelihood.h:136: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LowMemoryRescaledHmmLikelihood.h:137: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LowMemoryRescaledHmmLikelihood.h:138: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LowMemoryRescaledHmmLikelihood.h:139: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LowMemoryRescaledHmmLikelihood.h:140: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LowMemoryRescaledHmmLikelihood.h:141: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LowMemoryRescaledHmmLikelihood.h:142: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LowMemoryRescaledHmmLikelihood.h:143: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LowMemoryRescaledHmmLikelihood.h:144: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LowMemoryRescaledHmmLikelihood.h:145: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LowMemoryRescaledHmmLikelihood.h:146: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/LowMemoryRescaledHmmLikelihood.h:147: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/RescaledHmmLikelihood.h:128: objet ==> object
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/RescaledHmmLikelihood.h:137: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/RescaledHmmLikelihood.h:138: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/RescaledHmmLikelihood.h:139: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/RescaledHmmLikelihood.h:140: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/RescaledHmmLikelihood.h:141: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/RescaledHmmLikelihood.h:142: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/RescaledHmmLikelihood.h:143: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/RescaledHmmLikelihood.h:144: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/RescaledHmmLikelihood.h:145: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/RescaledHmmLikelihood.h:146: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/RescaledHmmLikelihood.h:147: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/RescaledHmmLikelihood.h:148: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/RescaledHmmLikelihood.h:149: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/RescaledHmmLikelihood.h:150: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/RescaledHmmLikelihood.h:151: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/RescaledHmmLikelihood.h:152: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/RescaledHmmLikelihood.h:153: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/RescaledHmmLikelihood.h:154: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/RescaledHmmLikelihood.h:161: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/RescaledHmmLikelihood.h:163: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/RescaledHmmLikelihood.h:164: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/RescaledHmmLikelihood.h:165: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/RescaledHmmLikelihood.h:166: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/RescaledHmmLikelihood.h:167: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/RescaledHmmLikelihood.h:168: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/RescaledHmmLikelihood.h:169: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/RescaledHmmLikelihood.h:170: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/RescaledHmmLikelihood.h:171: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/RescaledHmmLikelihood.h:172: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/RescaledHmmLikelihood.h:173: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/RescaledHmmLikelihood.h:174: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/RescaledHmmLikelihood.h:175: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/RescaledHmmLikelihood.h:176: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/RescaledHmmLikelihood.h:177: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/RescaledHmmLikelihood.h:178: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Hmm/RescaledHmmLikelihood.h:179: lik ==> like, lick, link
data/libbpp-core-2.4.1/src/Bpp/Numeric/Matrix/LUDecomposition.h:64: decompostion ==> decomposition
data/libbpp-core-2.4.1/src/Bpp/Numeric/Matrix/Matrix.h:524: fonctionnalities ==> functionalities
data/libbpp-core-2.4.1/src/Bpp/Numeric/Matrix/MatrixTools.h:65: inheritence ==> inheritance
data/libbpp-core-2.4.1/src/Bpp/Numeric/Matrix/MatrixTools.h:65: assigment ==> assignment
data/libbpp-core-2.4.1/src/Bpp/Numeric/Matrix/MatrixTools.h:771: handeling ==> handling
data/libbpp-core-2.4.1/src/Bpp/Numeric/Matrix/MatrixTools.h:880: intput ==> input
data/libbpp-core-2.4.1/src/Bpp/Numeric/Matrix/MatrixTools.h:1310: tranfer ==> transfer
data/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/AbstractDiscreteDistribution.h:55: cateogry ==> category
data/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/GammaDiscreteDistribution.cpp:63: classe ==> class, classes
data/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/MultipleDiscreteDistribution.h:125: optionnaly ==> optionally
data/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/SimpleDiscreteDistribution.cpp:301: arbitray ==> arbitrary
data/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/Simplex.h:140: probabilites ==> probabilities
data/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/Simplex.h:155: probabilites ==> probabilities
data/libbpp-core-2.4.1/src/Bpp/Numeric/Prob/UniformDiscreteDistribution.h:67: minimun ==> minimum
data/libbpp-core-2.4.1/src/Bpp/Numeric/Random/RandomTools.cpp:775: ans ==> and
data/libbpp-core-2.4.1/src/Bpp/Numeric/Random/RandomTools.cpp:791: ans ==> and
data/libbpp-core-2.4.1/src/Bpp/Numeric/Random/RandomTools.cpp:817: ans ==> and
data/libbpp-core-2.4.1/src/Bpp/Numeric/Random/RandomTools.cpp:818: ans ==> and
data/libbpp-core-2.4.1/src/Bpp/Numeric/Random/RandomTools.cpp:853: ans ==> and
data/libbpp-core-2.4.1/src/Bpp/Numeric/Random/RandomTools.cpp:889: ans ==> and
data/libbpp-core-2.4.1/src/Bpp/Numeric/Random/RandomTools.cpp:907: ans ==> and
data/libbpp-core-2.4.1/src/Bpp/Numeric/Random/RandomTools.cpp:933: ans ==> and
data/libbpp-core-2.4.1/src/Bpp/Numeric/Random/RandomTools.cpp:934: ans ==> and
data/libbpp-core-2.4.1/src/Bpp/Numeric/Random/RandomTools.cpp:969: ans ==> and
data/libbpp-core-2.4.1/src/Bpp/Numeric/Random/RandomTools.h:288: weigths ==> weights
data/libbpp-core-2.4.1/src/Bpp/Numeric/Random/RandomTools.h:322: intput ==> input
data/libbpp-core-2.4.1/src/Bpp/Numeric/Random/Uniform01K.cpp:102: serie ==> series
data/libbpp-core-2.4.1/src/Bpp/Numeric/Random/Uniform01K.cpp:103: serie ==> series
data/libbpp-core-2.4.1/src/Bpp/Numeric/Random/Uniform01WH.h:53: Fortan ==> Fortran
data/libbpp-core-2.4.1/src/Bpp/Numeric/Stat/ContingencyTableTest.cpp:123: Unsufficient ==> Insufficient
data/libbpp-core-2.4.1/src/Bpp/Numeric/Stat/ContingencyTableTest.h:72: unsufficient ==> insufficient
data/libbpp-core-2.4.1/src/Bpp/Numeric/Stat/Mva/CorrespondenceAnalysis.h:73: occured ==> occurred
data/libbpp-core-2.4.1/src/Bpp/Numeric/Stat/Mva/DualityDiagram.cpp:80: weigths ==> weights
data/libbpp-core-2.4.1/src/Bpp/Numeric/Stat/Mva/DualityDiagram.cpp:82: weigths ==> weights
data/libbpp-core-2.4.1/src/Bpp/Numeric/Stat/Mva/DualityDiagram.cpp:84: weigths ==> weights
data/libbpp-core-2.4.1/src/Bpp/Numeric/Stat/Mva/DualityDiagram.cpp:91: weigths ==> weights
data/libbpp-core-2.4.1/src/Bpp/Numeric/Stat/Mva/DualityDiagram.cpp:123: weigths ==> weights
data/libbpp-core-2.4.1/src/Bpp/Numeric/Stat/Mva/DualityDiagram.cpp:133: weigths ==> weights
data/libbpp-core-2.4.1/src/Bpp/Numeric/Stat/Mva/DualityDiagram.h:97: occured ==> occurred
data/libbpp-core-2.4.1/src/Bpp/Numeric/Stat/Mva/DualityDiagram.h:129: occured ==> occurred
data/libbpp-core-2.4.1/src/Bpp/Numeric/Stat/Mva/PrincipalComponentAnalysis.cpp:125: weigths ==> weights
data/libbpp-core-2.4.1/src/Bpp/Numeric/Stat/Mva/PrincipalComponentAnalysis.cpp:156: weigths ==> weights
data/libbpp-core-2.4.1/src/Bpp/Numeric/Stat/Mva/PrincipalComponentAnalysis.h:76: occured ==> occurred
data/libbpp-core-2.4.1/src/Bpp/Numeric/Stat/Mva/PrincipalComponentAnalysis.h:97: occured ==> occurred
data/libbpp-core-2.4.1/src/Bpp/Text/KeyvalTools.h:84: descibing ==> describing
data/libbpp-core-2.4.1/src/Bpp/Text/KeyvalTools.h:96: descibing ==> describing
data/libbpp-core-2.4.1/src/Bpp/Text/KeyvalTools.h:109: descibing ==> describing
data/libbpp-core-2.4.1/src/Bpp/Text/KeyvalTools.h:127: descibing ==> describing
data/libbpp-core-2.4.1/src/Bpp/Text/NestedStringTokenizer.cpp:78: untill ==> until
data/libbpp-core-2.4.1/src/Bpp/Text/NestedStringTokenizer.cpp:123: untill ==> until
data/libbpp-core-2.4.1/src/Bpp/Text/NestedStringTokenizer.h:71: bloc ==> block
data/libbpp-core-2.4.1/src/Bpp/Text/NestedStringTokenizer.h:81: availbale ==> available
data/libbpp-core-2.4.1/src/Bpp/Text/StringTokenizer.h:76: bloc ==> block
data/libbpp-core-2.4.1/src/Bpp/Text/StringTokenizer.h:90: availbale ==> available
data/libbpp-core-2.4.1/src/Bpp/Text/TextTools.h:127: reprensentation ==> representation
data/libbpp-core-2.4.1/src/Bpp/Text/TextTools.h:274: occurences ==> occurrences
data/libbpp-core-2.4.1/src/Bpp/Text/TextTools.h:283: occurences ==> occurrences
data/libbpp-core-2.4.1/src/Bpp/Text/TextTools.h:287: occurences ==> occurrences
data/libbpp-core-2.4.1/src/Bpp/Utils/AttributesTools.cpp:110: Splitted ==> Split
data/libbpp-core-2.4.1/src/Bpp/Utils/AttributesTools.h:79: begining ==> beginning
data/libbpp-core-2.4.1/test/doctest.h:1942: retreived ==> retrieved
data/libbpp-core-2.4.1/test/doctest.h:3403: SEH ==> SHE
data/libbpp-core-2.4.1/test/test_dAGraphObs.cpp:94: unvalid ==> invalid
data/libbpp-core-2.4.1/test/test_dAGraphObs.cpp:142: unvalid ==> invalid
data/libbpp-core-2.4.1/test/test_dAGraphObs.cpp:152: unvalid ==> invalid
data/libbpp-core-2.4.1/test/test_distributions.cpp:126: Unvalid ==> Invalid
data/libbpp-core-2.4.1/test/test_distributions.cpp:127: Unvalid ==> Invalid
data/libbpp-core-2.4.1/test/test_distributions.cpp:128: Unvalid ==> Invalid
data/libbpp-core-2.4.1/test/test_distributions.cpp:129: Unvalid ==> Invalid
data/libbpp-core-2.4.1/test/test_distributions.cpp:140: Unvalid ==> Invalid
data/libbpp-core-2.4.1/test/test_distributions.cpp:141: Unvalid ==> Invalid
data/libbpp-core-2.4.1/test/test_distributions.cpp:142: Unvalid ==> Invalid
data/libbpp-core-2.4.1/test/test_distributions.cpp:143: Unvalid ==> Invalid
data/libbpp-core-2.4.1/test/test_distributions.cpp:144: Unvalid ==> Invalid
data/libbpp-core-2.4.1/test/test_mva.cpp:121: weigths ==> weights
data/libbpp-core-2.4.1/test/test_treeGraphObs.cpp:98: unvalid ==> invalid
data/libbpp-core-2.4.1/test/test_treeGraphObs.cpp:172: unvalid ==> invalid
data/libbpp-core-2.4.1/debian/changelog:193: assigment ==> assignment
data/libbpp-core-2.4.1/debian/copyright:389: therefor ==> therefore