data/libssw-1.1/README.md:227: invokation ==> invocation
data/libssw-1.1/demo/54mer_hap1_1.100.fastq:76: BA ==> BY, BE
data/libssw-1.1/demo/54mer_hap1_1.100.fastq:80: BA ==> BY, BE
data/libssw-1.1/demo/54mer_hap1_1.100.fastq:92: BA ==> BY, BE
data/libssw-1.1/demo/54mer_hap1_1.100.fastq:136: DAA ==> DATA
data/libssw-1.1/demo/54mer_hap1_1.100.fastq:248: BA ==> BY, BE
data/libssw-1.1/demo/54mer_hap1_1.100.fastq:332: BA ==> BY, BE
data/libssw-1.1/demo/54mer_hap1_1.100.fastq:372: BA ==> BY, BE
data/libssw-1.1/src/example.c:146: setted ==> set
data/libssw-1.1/src/ssw_cpp.h:125: againt ==> against
data/libssw-1.1/src/ssw_cpp.h:135: againt ==> against
data/libssw-1.1/src/ssw_lib.py:161: setted ==> set
data/libssw-1.1/src/ssw_lib.py:162: setted ==> set
data/libssw-1.1/src/ssw_lib.py:163: setted ==> set
data/libssw-1.1/src/ssw_lib.py:164: setted ==> set
data/libssw-1.1/src/ssw_lib.py:164: setted ==> set
data/libssw-1.1/src/ssw_lib.py:165: setted ==> set
data/libssw-1.1/src/ssw_lib.py:166: setted ==> set
data/libssw-1.1/src/ssw_lib.py:168: setted ==> set
data/libssw-1.1/src/ssw_lib.py:168: setted ==> set
data/libssw-1.1/src/ssw_lib.py:169: decription ==> description
data/libssw-1.1/src/ssw_lib.py:170: setted ==> set
data/libssw-1.1/src/ssw_lib.py:170: setted ==> set
data/libssw-1.1/src/ssw_lib.py:171: decription ==> description
data/libssw-1.1/src/ssw_lib.py:181: setted ==> set
data/libssw-1.1/src/ssw_lib.py:182: setted ==> set
data/libssw-1.1/src/ssw.c:799: setted ==> set
data/libssw-1.1/src/ssw.c:947: tread ==> thread, treat
data/libssw-1.1/src/ssw.h:91: setted ==> set
data/libssw-1.1/src/ssw.h:92: setted ==> set
data/libssw-1.1/src/ssw.h:93: setted ==> set
data/libssw-1.1/src/ssw.h:94: setted ==> set
data/libssw-1.1/src/ssw.h:94: setted ==> set
data/libssw-1.1/src/ssw.h:95: setted ==> set
data/libssw-1.1/src/ssw.h:96: setted ==> set
data/libssw-1.1/src/ssw.h:98: setted ==> set
data/libssw-1.1/src/ssw.h:98: setted ==> set
data/libssw-1.1/src/ssw.h:99: decription ==> description
data/libssw-1.1/src/ssw.h:100: setted ==> set
data/libssw-1.1/src/ssw.h:100: setted ==> set
data/libssw-1.1/src/ssw.h:101: decription ==> description
data/libssw-1.1/src/ssw.h:111: setted ==> set
data/libssw-1.1/src/ssw.h:112: setted ==> set
data/libssw-1.1/src/main.c:219: mata ==> meta, mater
data/libssw-1.1/src/main.c:220: mata ==> meta, mater
data/libssw-1.1/src/main.c:309: tThe ==> the
data/libssw-1.1/src/main.c:317: mata ==> meta, mater
data/libssw-1.1/src/main.c:318: mata ==> meta, mater
data/libssw-1.1/src/main.c:320: mata ==> meta, mater
data/libssw-1.1/src/main.c:331: mata ==> meta, mater
data/libssw-1.1/src/main.c:331: mata ==> meta, mater
data/libssw-1.1/src/main.c:344: mata ==> meta, mater
data/libssw-1.1/src/main.c:352: mata ==> meta, mater
data/libssw-1.1/src/main.c:366: mata ==> meta, mater
data/libssw-1.1/src/main.c:465: mata ==> meta, mater
data/libssw-1.1/src/ssw/Aligner.java:25: setted ==> set
data/libssw-1.1/src/ssw/Aligner.java:29: setted ==> set
data/libssw-1.1/src/ssw/Aligner.java:29: setted ==> set
data/libssw-1.1/src/ssw/Aligner.java:33: setted ==> set
data/libssw-1.1/src/ssw/Aligner.java:33: setted ==> set
data/libssw-1.1/src/ssw/Aligner.java:37: setted ==> set
data/libssw-1.1/src/ssw/Aligner.java:37: setted ==> set
data/libssw-1.1/src/ssw/Aligner.java:51: setted ==> set
data/libssw-1.1/src/ssw/Aligner.java:52: setted ==> set
data/libssw-1.1/src/ssw/Aligner.java:53: setted ==> set
data/libssw-1.1/src/ssw/Aligner.java:54: setted ==> set
data/libssw-1.1/src/ssw/Aligner.java:54: setted ==> set
data/libssw-1.1/src/ssw/Aligner.java:55: setted ==> set
data/libssw-1.1/src/ssw/Aligner.java:56: setted ==> set
data/libssw-1.1/src/ssw/Aligner.java:58: setted ==> set
data/libssw-1.1/src/ssw/Aligner.java:59: setted ==> set
data/libssw-1.1/src/ssw/Aligner.java:62: setted ==> set
data/libssw-1.1/src/ssw/Aligner.java:62: setted ==> set
data/libssw-1.1/src/ssw/Aligner.java:63: decription ==> description
data/libssw-1.1/src/ssw/Aligner.java:64: setted ==> set
data/libssw-1.1/src/ssw/Aligner.java:64: setted ==> set
data/libssw-1.1/src/ssw/Aligner.java:65: decription ==> description
data/libssw-1.1/src/ssw/Aligner.java:92: sentinal ==> sentinel
data/libssw-1.1/.pc/rename_tool.patch/src/main.c:220: mata ==> meta, mater
data/libssw-1.1/.pc/rename_tool.patch/src/main.c:221: mata ==> meta, mater
data/libssw-1.1/.pc/rename_tool.patch/src/main.c:310: tThe ==> the
data/libssw-1.1/.pc/rename_tool.patch/src/main.c:318: mata ==> meta, mater
data/libssw-1.1/.pc/rename_tool.patch/src/main.c:319: mata ==> meta, mater
data/libssw-1.1/.pc/rename_tool.patch/src/main.c:321: mata ==> meta, mater
data/libssw-1.1/.pc/rename_tool.patch/src/main.c:332: mata ==> meta, mater
data/libssw-1.1/.pc/rename_tool.patch/src/main.c:332: mata ==> meta, mater
data/libssw-1.1/.pc/rename_tool.patch/src/main.c:345: mata ==> meta, mater
data/libssw-1.1/.pc/rename_tool.patch/src/main.c:353: mata ==> meta, mater
data/libssw-1.1/.pc/rename_tool.patch/src/main.c:367: mata ==> meta, mater
data/libssw-1.1/.pc/rename_tool.patch/src/main.c:466: mata ==> meta, mater
data/libssw-1.1/.pc/simde.patch/src/ssw.c:798: setted ==> set
data/libssw-1.1/.pc/simde.patch/src/ssw.c:946: tread ==> thread, treat
data/libssw-1.1/.pc/simde.patch/src/ssw.h:92: setted ==> set
data/libssw-1.1/.pc/simde.patch/src/ssw.h:93: setted ==> set
data/libssw-1.1/.pc/simde.patch/src/ssw.h:94: setted ==> set
data/libssw-1.1/.pc/simde.patch/src/ssw.h:95: setted ==> set
data/libssw-1.1/.pc/simde.patch/src/ssw.h:95: setted ==> set
data/libssw-1.1/.pc/simde.patch/src/ssw.h:96: setted ==> set
data/libssw-1.1/.pc/simde.patch/src/ssw.h:97: setted ==> set
data/libssw-1.1/.pc/simde.patch/src/ssw.h:99: setted ==> set
data/libssw-1.1/.pc/simde.patch/src/ssw.h:99: setted ==> set
data/libssw-1.1/.pc/simde.patch/src/ssw.h:100: decription ==> description
data/libssw-1.1/.pc/simde.patch/src/ssw.h:101: setted ==> set
data/libssw-1.1/.pc/simde.patch/src/ssw.h:101: setted ==> set
data/libssw-1.1/.pc/simde.patch/src/ssw.h:102: decription ==> description
data/libssw-1.1/.pc/simde.patch/src/ssw.h:112: setted ==> set
data/libssw-1.1/.pc/simde.patch/src/ssw.h:113: setted ==> set
data/libssw-1.1/.pc/simde.patch/src/main.c:220: mata ==> meta, mater
data/libssw-1.1/.pc/simde.patch/src/main.c:221: mata ==> meta, mater
data/libssw-1.1/.pc/simde.patch/src/main.c:310: tThe ==> the
data/libssw-1.1/.pc/simde.patch/src/main.c:318: mata ==> meta, mater
data/libssw-1.1/.pc/simde.patch/src/main.c:319: mata ==> meta, mater
data/libssw-1.1/.pc/simde.patch/src/main.c:321: mata ==> meta, mater
data/libssw-1.1/.pc/simde.patch/src/main.c:332: mata ==> meta, mater
data/libssw-1.1/.pc/simde.patch/src/main.c:332: mata ==> meta, mater
data/libssw-1.1/.pc/simde.patch/src/main.c:345: mata ==> meta, mater
data/libssw-1.1/.pc/simde.patch/src/main.c:353: mata ==> meta, mater
data/libssw-1.1/.pc/simde.patch/src/main.c:367: mata ==> meta, mater
data/libssw-1.1/.pc/simde.patch/src/main.c:466: mata ==> meta, mater