data/molmodel-3.0~svn842/Doxyfile.in:282: penality ==> penalty
data/molmodel-3.0~svn842/CMakeLists.txt:421: agressive ==> aggressive
data/molmodel-3.0~svn842/OpenMMPlugin/OpenMMPlugin.cpp:159: nax ==> max, nad
data/molmodel-3.0~svn842/OpenMMPlugin/OpenMMPlugin.cpp:159: nax ==> max, nad
data/molmodel-3.0~svn842/OpenMMPlugin/OpenMMPlugin.cpp:159: nax ==> max, nad
data/molmodel-3.0~svn842/OpenMMPlugin/OpenMMPlugin.cpp:161: nax ==> max, nad
data/molmodel-3.0~svn842/OpenMMPlugin/OpenMMPlugin.cpp:184: nax ==> max, nad
data/molmodel-3.0~svn842/OpenMMPlugin/OpenMMPlugin.cpp:184: nax ==> max, nad
data/molmodel-3.0~svn842/OpenMMPlugin/OpenMMPlugin.cpp:185: nax ==> max, nad
data/molmodel-3.0~svn842/OpenMMPlugin/OpenMMPlugin.cpp:186: nax ==> max, nad
data/molmodel-3.0~svn842/OpenMMPlugin/OpenMMPlugin.cpp:204: nax ==> max, nad
data/molmodel-3.0~svn842/OpenMMPlugin/OpenMMPlugin.cpp:225: nax ==> max, nad
data/molmodel-3.0~svn842/OpenMMPlugin/OpenMMPlugin.cpp:225: nax ==> max, nad
data/molmodel-3.0~svn842/OpenMMPlugin/OpenMMPlugin.cpp:226: nax ==> max, nad
data/molmodel-3.0~svn842/OpenMMPlugin/OpenMMPlugin.cpp:227: nax ==> max, nad
data/molmodel-3.0~svn842/OpenMMPlugin/OpenMMPlugin.cpp:228: nax ==> max, nad
data/molmodel-3.0~svn842/OpenMMPlugin/OpenMMPlugin.cpp:229: nax ==> max, nad
data/molmodel-3.0~svn842/OpenMMPlugin/OpenMMPlugin.cpp:306: nax ==> max, nad
data/molmodel-3.0~svn842/OpenMMPlugin/OpenMMPlugin.cpp:306: nax ==> max, nad
data/molmodel-3.0~svn842/OpenMMPlugin/OpenMMPlugin.cpp:306: nax ==> max, nad
data/molmodel-3.0~svn842/OpenMMPlugin/OpenMMPlugin.cpp:308: nax ==> max, nad
data/molmodel-3.0~svn842/OpenMMPlugin/OpenMMPlugin.cpp:309: nax ==> max, nad
data/molmodel-3.0~svn842/OpenMMPlugin/OpenMMPlugin.cpp:320: nax ==> max, nad
data/molmodel-3.0~svn842/OpenMMPlugin/OpenMMPlugin.cpp:320: nax ==> max, nad
data/molmodel-3.0~svn842/OpenMMPlugin/OpenMMPlugin.cpp:321: nax ==> max, nad
data/molmodel-3.0~svn842/OpenMMPlugin/OpenMMPlugin.cpp:323: nax ==> max, nad
data/molmodel-3.0~svn842/OpenMMPlugin/OpenMMPlugin.cpp:326: nax ==> max, nad
data/molmodel-3.0~svn842/src/DuMMForceFieldSubsystem.cpp:1864: Cant ==> Can't
data/molmodel-3.0~svn842/src/DuMMForceFieldSubsystem.cpp:1880: Cant ==> Can't
data/molmodel-3.0~svn842/src/DuMMForceFieldSubsystem.cpp:1904: Cant ==> Can't
data/molmodel-3.0~svn842/src/DuMMForceFieldSubsystem.cpp:1923: Cant ==> Can't
data/molmodel-3.0~svn842/src/DuMMForceFieldSubsystem.cpp:1946: Cant ==> Can't
data/molmodel-3.0~svn842/src/Biotype.cpp:4288: SER ==> SET
data/molmodel-3.0~svn842/src/Biotype.cpp:4293: SER ==> SET
data/molmodel-3.0~svn842/src/Biotype.cpp:4298: SER ==> SET
data/molmodel-3.0~svn842/src/Biotype.cpp:4303: SER ==> SET
data/molmodel-3.0~svn842/src/Biotype.cpp:4308: SER ==> SET
data/molmodel-3.0~svn842/src/Biotype.cpp:4313: SER ==> SET
data/molmodel-3.0~svn842/src/Biotype.cpp:4318: SER ==> SET
data/molmodel-3.0~svn842/src/Biotype.cpp:4323: SER ==> SET
data/molmodel-3.0~svn842/src/Biotype.cpp:4328: SER ==> SET
data/molmodel-3.0~svn842/src/Biotype.cpp:4333: SER ==> SET
data/molmodel-3.0~svn842/src/Biotype.cpp:4338: SER ==> SET
data/molmodel-3.0~svn842/src/Biotype.cpp:4343: SER ==> SET
data/molmodel-3.0~svn842/src/Biotype.cpp:5798: SER ==> SET
data/molmodel-3.0~svn842/src/Biotype.cpp:5803: SER ==> SET
data/molmodel-3.0~svn842/src/Biotype.cpp:5808: SER ==> SET
data/molmodel-3.0~svn842/src/Biotype.cpp:5813: SER ==> SET
data/molmodel-3.0~svn842/src/Biotype.cpp:5818: SER ==> SET
data/molmodel-3.0~svn842/src/Biotype.cpp:5823: SER ==> SET
data/molmodel-3.0~svn842/src/Biotype.cpp:5828: SER ==> SET
data/molmodel-3.0~svn842/src/Biotype.cpp:5833: SER ==> SET
data/molmodel-3.0~svn842/src/Biotype.cpp:5838: SER ==> SET
data/molmodel-3.0~svn842/src/Biotype.cpp:5843: SER ==> SET
data/molmodel-3.0~svn842/src/Biotype.cpp:5848: SER ==> SET
data/molmodel-3.0~svn842/src/Biotype.cpp:5853: SER ==> SET
data/molmodel-3.0~svn842/src/mol.h:174: ser ==> set
data/molmodel-3.0~svn842/src/mol.h:183: adn ==> and
data/molmodel-3.0~svn842/src/mol.h:236: ser ==> set
data/molmodel-3.0~svn842/src/mol.h:487: struc ==> struct
data/molmodel-3.0~svn842/src/mol.h:541: conect ==> connect
data/molmodel-3.0~svn842/src/mol.h:582: struc ==> struct
data/molmodel-3.0~svn842/src/mol.h:631: struc ==> struct
data/molmodel-3.0~svn842/src/mol.h:637: struc ==> struct
data/molmodel-3.0~svn842/src/mol.h:649: struc ==> struct
data/molmodel-3.0~svn842/src/mol.h:652: struc ==> struct
data/molmodel-3.0~svn842/src/mol.h:653: struc ==> struct
data/molmodel-3.0~svn842/src/mol.h:656: struc ==> struct
data/molmodel-3.0~svn842/src/mol.h:662: struc ==> struct
data/molmodel-3.0~svn842/src/mol.h:665: struc ==> struct
data/molmodel-3.0~svn842/src/mol.h:668: struc ==> struct
data/molmodel-3.0~svn842/src/mol.h:671: struc ==> struct
data/molmodel-3.0~svn842/src/mol.h:674: struc ==> struct
data/molmodel-3.0~svn842/src/mol.h:677: struc ==> struct
data/molmodel-3.0~svn842/src/mol.h:680: struc ==> struct
data/molmodel-3.0~svn842/src/mol.cpp:98: struc ==> struct
data/molmodel-3.0~svn842/src/mol.cpp:135: struc ==> struct
data/molmodel-3.0~svn842/src/mol.cpp:149: struc ==> struct
data/molmodel-3.0~svn842/src/mol.cpp:190: struc ==> struct
data/molmodel-3.0~svn842/src/mol.cpp:190: struc ==> struct
data/molmodel-3.0~svn842/src/mol.cpp:236: struc ==> struct
data/molmodel-3.0~svn842/src/mol.cpp:263: struc ==> struct
data/molmodel-3.0~svn842/src/mol.cpp:277: struc ==> struct
data/molmodel-3.0~svn842/src/mol.cpp:279: struc ==> struct
data/molmodel-3.0~svn842/src/mol.cpp:280: struc ==> struct
data/molmodel-3.0~svn842/src/mol.cpp:291: struc ==> struct
data/molmodel-3.0~svn842/src/mol.cpp:292: struc ==> struct
data/molmodel-3.0~svn842/src/mol.cpp:316: struc ==> struct
data/molmodel-3.0~svn842/src/mol.cpp:318: struc ==> struct
data/molmodel-3.0~svn842/src/mol.cpp:359: triming ==> trimming, timing
data/molmodel-3.0~svn842/src/mol.cpp:449: struc ==> struct
data/molmodel-3.0~svn842/src/mol.cpp:486: struc ==> struct
data/molmodel-3.0~svn842/src/mol.cpp:550: struc ==> struct
data/molmodel-3.0~svn842/src/mol.cpp:563: struc ==> struct
data/molmodel-3.0~svn842/src/mol.cpp:591: struc ==> struct
data/molmodel-3.0~svn842/src/mol.cpp:604: struc ==> struct
data/molmodel-3.0~svn842/src/mol.cpp:814: struc ==> struct
data/molmodel-3.0~svn842/src/mol.cpp:816: struc ==> struct
data/molmodel-3.0~svn842/src/mol.cpp:844: struc ==> struct
data/molmodel-3.0~svn842/src/mol.cpp:850: struc ==> struct
data/molmodel-3.0~svn842/src/mol.cpp:851: struc ==> struct
data/molmodel-3.0~svn842/src/mol.cpp:879: struc ==> struct
data/molmodel-3.0~svn842/src/mol.cpp:891: struc ==> struct
data/molmodel-3.0~svn842/src/mol.cpp:936: struc ==> struct
data/molmodel-3.0~svn842/src/mol.cpp:958: struc ==> struct
data/molmodel-3.0~svn842/src/mol.cpp:989: struc ==> struct
data/molmodel-3.0~svn842/src/mol.cpp:1030: struc ==> struct
data/molmodel-3.0~svn842/src/mol.cpp:1052: struc ==> struct
data/molmodel-3.0~svn842/src/mol.cpp:1079: struc ==> struct
data/molmodel-3.0~svn842/src/mol.cpp:1137: struc ==> struct
data/molmodel-3.0~svn842/src/mol.cpp:1253: struc ==> struct
data/molmodel-3.0~svn842/src/mol.cpp:1258: struc ==> struct
data/molmodel-3.0~svn842/src/mol.cpp:1265: struc ==> struct
data/molmodel-3.0~svn842/src/mol.cpp:1287: struc ==> struct
data/molmodel-3.0~svn842/src/mol.cpp:1309: struc ==> struct
data/molmodel-3.0~svn842/src/mol.cpp:1366: struc ==> struct
data/molmodel-3.0~svn842/src/mol.cpp:1484: struc ==> struct
data/molmodel-3.0~svn842/src/mol.cpp:1506: struc ==> struct
data/molmodel-3.0~svn842/src/mol.cpp:1507: struc ==> struct
data/molmodel-3.0~svn842/src/mol.cpp:1521: struc ==> struct
data/molmodel-3.0~svn842/src/mol.cpp:1566: struc ==> struct
data/molmodel-3.0~svn842/src/mol.cpp:1567: struc ==> struct
data/molmodel-3.0~svn842/src/mol.cpp:1568: struc ==> struct
data/molmodel-3.0~svn842/src/mol.cpp:1585: struc ==> struct
data/molmodel-3.0~svn842/src/mol.cpp:1614: struc ==> struct
data/molmodel-3.0~svn842/src/mol.cpp:1615: struc ==> struct
data/molmodel-3.0~svn842/src/mol.cpp:1629: struc ==> struct
data/molmodel-3.0~svn842/src/mol.cpp:1643: struc ==> struct
data/molmodel-3.0~svn842/src/mol.cpp:1644: struc ==> struct
data/molmodel-3.0~svn842/src/mol.cpp:1660: struc ==> struct
data/molmodel-3.0~svn842/src/mol.cpp:1686: struc ==> struct
data/molmodel-3.0~svn842/src/mol.cpp:1687: struc ==> struct
data/molmodel-3.0~svn842/src/mol.cpp:1713: struc ==> struct
data/molmodel-3.0~svn842/src/mol.cpp:1767: struc ==> struct
data/molmodel-3.0~svn842/src/mol.cpp:1767: struc ==> struct
data/molmodel-3.0~svn842/src/mol.cpp:1769: struc ==> struct
data/molmodel-3.0~svn842/src/mol.cpp:1771: struc ==> struct
data/molmodel-3.0~svn842/src/mol.cpp:2130: waring ==> warning
data/molmodel-3.0~svn842/src/Element.cpp:235: Te ==> The, be, we
data/molmodel-3.0~svn842/src/Element.cpp:239: Ba ==> By, be
data/molmodel-3.0~svn842/src/Element.cpp:243: Nd ==> And, 2nd
data/molmodel-3.0~svn842/src/AtomSubsystem.cpp:140: Subystem ==> Subsystem
data/molmodel-3.0~svn842/src/TinkerAmber99.cpp:440: SER ==> SET
data/molmodel-3.0~svn842/src/TinkerAmber99.cpp:441: SER ==> SET
data/molmodel-3.0~svn842/src/TinkerAmber99.cpp:442: SER ==> SET
data/molmodel-3.0~svn842/src/TinkerAmber99.cpp:443: SER ==> SET
data/molmodel-3.0~svn842/src/TinkerAmber99.cpp:444: SER ==> SET
data/molmodel-3.0~svn842/src/TinkerAmber99.cpp:445: SER ==> SET
data/molmodel-3.0~svn842/src/TinkerAmber99.cpp:591: SER ==> SET
data/molmodel-3.0~svn842/src/TinkerAmber99.cpp:592: SER ==> SET
data/molmodel-3.0~svn842/src/TinkerAmber99.cpp:593: SER ==> SET
data/molmodel-3.0~svn842/src/TinkerAmber99.cpp:594: SER ==> SET
data/molmodel-3.0~svn842/src/TinkerAmber99.cpp:595: SER ==> SET
data/molmodel-3.0~svn842/src/TinkerAmber99.cpp:596: SER ==> SET
data/molmodel-3.0~svn842/src/TinkerAmber99.cpp:2002: SER ==> SET
data/molmodel-3.0~svn842/src/TinkerAmber99.cpp:2003: SER ==> SET
data/molmodel-3.0~svn842/src/TinkerAmber99.cpp:2004: SER ==> SET
data/molmodel-3.0~svn842/src/TinkerAmber99.cpp:2005: SER ==> SET
data/molmodel-3.0~svn842/src/TinkerAmber99.cpp:2006: SER ==> SET
data/molmodel-3.0~svn842/src/TinkerAmber99.cpp:2007: SER ==> SET
data/molmodel-3.0~svn842/src/TinkerAmber99.cpp:2153: SER ==> SET
data/molmodel-3.0~svn842/src/TinkerAmber99.cpp:2154: SER ==> SET
data/molmodel-3.0~svn842/src/TinkerAmber99.cpp:2155: SER ==> SET
data/molmodel-3.0~svn842/src/TinkerAmber99.cpp:2156: SER ==> SET
data/molmodel-3.0~svn842/src/TinkerAmber99.cpp:2157: SER ==> SET
data/molmodel-3.0~svn842/src/TinkerAmber99.cpp:2158: SER ==> SET
data/molmodel-3.0~svn842/src/DuMMForceFieldSubsystemRep.h:629: iTerm ==> term, item, intern
data/molmodel-3.0~svn842/src/DuMMForceFieldSubsystemRep.h:630: iTerm ==> term, item, intern
data/molmodel-3.0~svn842/src/DuMMForceFieldSubsystemRep.h:630: iTerm ==> term, item, intern
data/molmodel-3.0~svn842/src/DuMMForceFieldSubsystemRep.h:630: iTerm ==> term, item, intern
data/molmodel-3.0~svn842/src/DuMMForceFieldSubsystemRep.h:631: iTerm ==> term, item, intern
data/molmodel-3.0~svn842/src/DuMMForceFieldSubsystemRep.cpp:929: implemention ==> implementation
data/molmodel-3.0~svn842/src/DuMMForceFieldSubsystemRep.cpp:1791: nax ==> max, nad
data/molmodel-3.0~svn842/src/DuMMForceFieldSubsystemRep.cpp:1791: nax ==> max, nad
data/molmodel-3.0~svn842/src/DuMMForceFieldSubsystemRep.cpp:1791: nax ==> max, nad
data/molmodel-3.0~svn842/src/DuMMForceFieldSubsystemRep.cpp:1793: nax ==> max, nad
data/molmodel-3.0~svn842/src/DuMMForceFieldSubsystemRep.cpp:1797: nax ==> max, nad
data/molmodel-3.0~svn842/src/DuMMForceFieldSubsystemRep.cpp:1798: nax ==> max, nad
data/molmodel-3.0~svn842/src/DuMMForceFieldSubsystemRep.cpp:1799: nax ==> max, nad
data/molmodel-3.0~svn842/src/DuMMForceFieldSubsystemRep.cpp:1824: nax ==> max, nad
data/molmodel-3.0~svn842/src/DuMMForceFieldSubsystemRep.cpp:1825: nax ==> max, nad
data/molmodel-3.0~svn842/src/DuMMForceFieldSubsystemRep.cpp:1825: nax ==> max, nad
data/molmodel-3.0~svn842/src/DuMMForceFieldSubsystemRep.cpp:1828: nax ==> max, nad
data/molmodel-3.0~svn842/src/DuMMForceFieldSubsystemRep.cpp:1831: nax ==> max, nad
data/molmodel-3.0~svn842/src/DuMMForceFieldSubsystemRep.cpp:1832: nax ==> max, nad
data/molmodel-3.0~svn842/src/DuMMForceFieldSubsystemRep.cpp:1833: nax ==> max, nad
data/molmodel-3.0~svn842/src/DuMMForceFieldSubsystemRep.cpp:2644: alread ==> already
data/molmodel-3.0~svn842/src/PDBReader.cpp:266: struc ==> struct
data/molmodel-3.0~svn842/src/PDBReader.cpp:294: struc ==> struct
data/molmodel-3.0~svn842/src/PDBReader.cpp:294: struc ==> struct
data/molmodel-3.0~svn842/src/PDBReader.cpp:295: struc ==> struct
data/molmodel-3.0~svn842/src/PDBReader.cpp:295: struc ==> struct
data/molmodel-3.0~svn842/src/PDBReader.cpp:325: struc ==> struct
data/molmodel-3.0~svn842/src/PDBReader.cpp:326: struc ==> struct
data/molmodel-3.0~svn842/src/PDBReader.cpp:326: struc ==> struct
data/molmodel-3.0~svn842/src/PDBReader.cpp:327: struc ==> struct
data/molmodel-3.0~svn842/src/PDBReader.cpp:328: struc ==> struct
data/molmodel-3.0~svn842/src/PDBReader.cpp:333: suplied ==> supplied
data/molmodel-3.0~svn842/src/PDBReader.cpp:333: alse ==> also, else, false
data/molmodel-3.0~svn842/src/Compound.cpp:2694: SER ==> SET
data/molmodel-3.0~svn842/src/Pdb.cpp:38: accomodate ==> accommodate
data/molmodel-3.0~svn842/src/Pdb.cpp:138: alloted ==> allotted
data/molmodel-3.0~svn842/src/gbsa/CpuImplicitSolvent.cpp:660: intitialized ==> initialized
data/molmodel-3.0~svn842/src/gbsa/CpuImplicitSolvent.cpp:1137: nNumber ==> number
data/molmodel-3.0~svn842/src/gbsa/SimTKOpenMMUtilities.h:176: optinal ==> optional
data/molmodel-3.0~svn842/src/gbsa/SimTKOpenMMUtilities.h:205: intitial ==> initial
data/molmodel-3.0~svn842/src/gbsa/SimTKOpenMMUtilities.h:242: intitial ==> initial
data/molmodel-3.0~svn842/src/gbsa/SimTKOpenMMUtilities.cpp:289: optinal ==> optional
data/molmodel-3.0~svn842/src/gbsa/SimTKOpenMMUtilities.cpp:296: coud ==> could
data/molmodel-3.0~svn842/src/gbsa/SimTKOpenMMUtilities.cpp:391: intitial ==> initial
data/molmodel-3.0~svn842/src/gbsa/SimTKOpenMMUtilities.cpp:473: intitial ==> initial
data/molmodel-3.0~svn842/src/gbsa/SimTKOpenMMUtilities.cpp:817: nIn ==> inn, min, bin, nine
data/molmodel-3.0~svn842/src/gbsa/CpuObc.h:49: intialization ==> initialization
data/molmodel-3.0~svn842/src/gbsa/CpuImplicitSolvent.h:96: intialization ==> initialization
data/molmodel-3.0~svn842/examples/adenylates.vmd:107: SER ==> SET
data/molmodel-3.0~svn842/examples/adenylates.vmd:127: BA ==> BY, BE
data/molmodel-3.0~svn842/examples/adenylates.vmd:360: Ba ==> By, be
data/molmodel-3.0~svn842/examples/adenylates.vmd:410: Nd ==> And, 2nd
data/molmodel-3.0~svn842/examples/adenylates.vmd:443: Te ==> The, be, we
data/molmodel-3.0~svn842/examples/1AKGtrim.pdb:177: FORMATE ==> FORMAT
data/molmodel-3.0~svn842/examples/1AKGtrim.pdb:229: SER ==> SET
data/molmodel-3.0~svn842/examples/1AKGtrim.pdb:229: SER ==> SET
data/molmodel-3.0~svn842/examples/1AKGtrim.pdb:262: SER ==> SET
data/molmodel-3.0~svn842/examples/1AKGtrim.pdb:263: SER ==> SET
data/molmodel-3.0~svn842/examples/1AKGtrim.pdb:264: SER ==> SET
data/molmodel-3.0~svn842/examples/1AKGtrim.pdb:265: SER ==> SET
data/molmodel-3.0~svn842/examples/1AKGtrim.pdb:266: SER ==> SET
data/molmodel-3.0~svn842/examples/1AKGtrim.pdb:310: SER ==> SET
data/molmodel-3.0~svn842/examples/1AKGtrim.pdb:311: SER ==> SET
data/molmodel-3.0~svn842/examples/1AKGtrim.pdb:312: SER ==> SET
data/molmodel-3.0~svn842/examples/1AKGtrim.pdb:313: SER ==> SET
data/molmodel-3.0~svn842/examples/1AKGtrim.pdb:314: SER ==> SET
data/molmodel-3.0~svn842/examples/1AKGtrim.pdb:359: CONECT ==> CONNECT
data/molmodel-3.0~svn842/examples/1AKGtrim.pdb:360: CONECT ==> CONNECT
data/molmodel-3.0~svn842/examples/1AKGtrim.pdb:361: CONECT ==> CONNECT
data/molmodel-3.0~svn842/examples/1AKGtrim.pdb:362: CONECT ==> CONNECT
data/molmodel-3.0~svn842/examples/1AKGtrim.pdb:363: CONECT ==> CONNECT
data/molmodel-3.0~svn842/examples/1AKGtrim.pdb:364: CONECT ==> CONNECT
data/molmodel-3.0~svn842/examples/ExampleFoldPolyalanine.cpp:163: SER ==> SET
data/molmodel-3.0~svn842/examples/ExampleFoldPolyalanine.cpp:164: SER ==> SET
data/molmodel-3.0~svn842/examples/ExampleFoldPolyalanine.cpp:164: SER ==> SET
data/molmodel-3.0~svn842/examples/1AKG.pdb:177: FORMATE ==> FORMAT
data/molmodel-3.0~svn842/examples/1AKG.pdb:229: SER ==> SET
data/molmodel-3.0~svn842/examples/1AKG.pdb:229: SER ==> SET
data/molmodel-3.0~svn842/examples/1AKG.pdb:262: SER ==> SET
data/molmodel-3.0~svn842/examples/1AKG.pdb:263: SER ==> SET
data/molmodel-3.0~svn842/examples/1AKG.pdb:264: SER ==> SET
data/molmodel-3.0~svn842/examples/1AKG.pdb:265: SER ==> SET
data/molmodel-3.0~svn842/examples/1AKG.pdb:266: SER ==> SET
data/molmodel-3.0~svn842/examples/1AKG.pdb:310: SER ==> SET
data/molmodel-3.0~svn842/examples/1AKG.pdb:311: SER ==> SET
data/molmodel-3.0~svn842/examples/1AKG.pdb:312: SER ==> SET
data/molmodel-3.0~svn842/examples/1AKG.pdb:313: SER ==> SET
data/molmodel-3.0~svn842/examples/1AKG.pdb:314: SER ==> SET
data/molmodel-3.0~svn842/examples/1AKG.pdb:383: CONECT ==> CONNECT
data/molmodel-3.0~svn842/examples/1AKG.pdb:384: CONECT ==> CONNECT
data/molmodel-3.0~svn842/examples/1AKG.pdb:385: CONECT ==> CONNECT
data/molmodel-3.0~svn842/examples/1AKG.pdb:386: CONECT ==> CONNECT
data/molmodel-3.0~svn842/examples/1AKG.pdb:387: CONECT ==> CONNECT
data/molmodel-3.0~svn842/examples/1AKG.pdb:388: CONECT ==> CONNECT
data/molmodel-3.0~svn842/include/molmodel/internal/Ligands.h:280: szie ==> size
data/molmodel-3.0~svn842/include/molmodel/internal/VelocityRescalingThermostat.h:114: temperture ==> temperature
data/molmodel-3.0~svn842/include/molmodel/internal/CompoundSystem.h:24: instrinsic ==> intrinsic
data/molmodel-3.0~svn842/include/molmodel/internal/AtomSubsystem.h:12: Subystem ==> Subsystem
data/molmodel-3.0~svn842/include/molmodel/internal/Pdb.h:134: follwed ==> followed
data/molmodel-3.0~svn842/include/molmodel/internal/Pdb.h:464: Constructure ==> Constructor
data/molmodel-3.0~svn842/include/molmodel/internal/Water.h:29: parms ==> params, prams
data/molmodel-3.0~svn842/include/molmodel/internal/Water.h:54: parms ==> params, prams
data/molmodel-3.0~svn842/include/molmodel/internal/NA.h:217: ether ==> either
data/molmodel-3.0~svn842/include/molmodel/internal/Protein.h:121: aranged ==> arranged
data/molmodel-3.0~svn842/include/molmodel/internal/Protein.h:258: posessing ==> possessing
data/molmodel-3.0~svn842/include/molmodel/internal/Protein.h:281: posessing ==> possessing
data/molmodel-3.0~svn842/include/molmodel/internal/Protein.h:851: Ser ==> Set
data/molmodel-3.0~svn842/include/molmodel/internal/Compound.h:170: instrinsic ==> intrinsic
data/molmodel-3.0~svn842/include/molmodel/internal/Compound.h:178: instrinsic ==> intrinsic
data/molmodel-3.0~svn842/include/molmodel/internal/Compound.h:192: instrinsic ==> intrinsic
data/molmodel-3.0~svn842/include/molmodel/internal/Compound.h:199: instrinsic ==> intrinsic
data/molmodel-3.0~svn842/include/molmodel/internal/Compound.h:580: inital ==> initial
data/molmodel-3.0~svn842/include/molmodel/internal/Compound.h:1026: repect ==> respect
data/molmodel-3.0~svn842/include/molmodel/internal/Compound.h:1234: exaclty ==> exactly
data/molmodel-3.0~svn842/include/molmodel/internal/Compound.h:1543: COO ==> COUP
data/molmodel-3.0~svn842/include/molmodel/internal/MassCenterMotionRemover.h:42: sytem ==> system
data/molmodel-3.0~svn842/include/molmodel/internal/MassCenterMotionRemover.h:150: efficent ==> efficient
data/molmodel-3.0~svn842/include/molmodel/internal/VoxelHash.h:12: Subystem ==> Subsystem
data/molmodel-3.0~svn842/include/molmodel/internal/Element.h:327: Te ==> The, be, we
data/molmodel-3.0~svn842/include/molmodel/internal/Element.h:335: Ba ==> By, be
data/molmodel-3.0~svn842/include/molmodel/internal/Element.h:343: Nd ==> And, 2nd
data/molmodel-3.0~svn842/include/molmodel/internal/DuMMForceFieldSubsystem.h:782: Prexisting ==> Preexisting
data/molmodel-3.0~svn842/include/molmodel/internal/DuMMForceFieldSubsystem.h:972: paramter ==> parameter
data/molmodel-3.0~svn842/tests/TestEthane.cpp:79: ser ==> set
data/molmodel-3.0~svn842/tests/TestEthane.cpp:84: ser ==> set
data/molmodel-3.0~svn842/tests/TestAtomTargetLocations.cpp:56: SER ==> SET
data/molmodel-3.0~svn842/tests/TestAtomTargetLocations.cpp:57: SER ==> SET
data/molmodel-3.0~svn842/tests/TestAtomTargetLocations.cpp:58: SER ==> SET
data/molmodel-3.0~svn842/tests/TestAtomTargetLocations.cpp:59: SER ==> SET
data/molmodel-3.0~svn842/tests/TestAtomTargetLocations.cpp:60: SER ==> SET
data/molmodel-3.0~svn842/tests/TestAtomTargetLocations.cpp:61: SER ==> SET
data/molmodel-3.0~svn842/tests/adhoc/TestSimpleProtein.cpp:129: villin ==> villi, villain, villein
data/molmodel-3.0~svn842/tests/adhoc/TestSimpleProtein.cpp:134: Villin ==> Villi, villain, villein
data/molmodel-3.0~svn842/resources/tinker_amber99_clean.prm:458: SER ==> SET
data/molmodel-3.0~svn842/resources/tinker_amber99_clean.prm:459: SER ==> SET
data/molmodel-3.0~svn842/resources/tinker_amber99_clean.prm:460: SER ==> SET
data/molmodel-3.0~svn842/resources/tinker_amber99_clean.prm:461: SER ==> SET
data/molmodel-3.0~svn842/resources/tinker_amber99_clean.prm:462: SER ==> SET
data/molmodel-3.0~svn842/resources/tinker_amber99_clean.prm:463: SER ==> SET
data/molmodel-3.0~svn842/resources/tinker_amber99_clean.prm:609: SER ==> SET
data/molmodel-3.0~svn842/resources/tinker_amber99_clean.prm:610: SER ==> SET
data/molmodel-3.0~svn842/resources/tinker_amber99_clean.prm:611: SER ==> SET
data/molmodel-3.0~svn842/resources/tinker_amber99_clean.prm:612: SER ==> SET
data/molmodel-3.0~svn842/resources/tinker_amber99_clean.prm:613: SER ==> SET
data/molmodel-3.0~svn842/resources/tinker_amber99_clean.prm:614: SER ==> SET
data/molmodel-3.0~svn842/resources/tinker_amber99_clean.prm:3036: SER ==> SET
data/molmodel-3.0~svn842/resources/tinker_amber99_clean.prm:3037: SER ==> SET
data/molmodel-3.0~svn842/resources/tinker_amber99_clean.prm:3038: SER ==> SET
data/molmodel-3.0~svn842/resources/tinker_amber99_clean.prm:3039: SER ==> SET
data/molmodel-3.0~svn842/resources/tinker_amber99_clean.prm:3040: SER ==> SET
data/molmodel-3.0~svn842/resources/tinker_amber99_clean.prm:3041: SER ==> SET
data/molmodel-3.0~svn842/resources/tinker_amber99_clean.prm:3187: SER ==> SET
data/molmodel-3.0~svn842/resources/tinker_amber99_clean.prm:3188: SER ==> SET
data/molmodel-3.0~svn842/resources/tinker_amber99_clean.prm:3189: SER ==> SET
data/molmodel-3.0~svn842/resources/tinker_amber99_clean.prm:3190: SER ==> SET
data/molmodel-3.0~svn842/resources/tinker_amber99_clean.prm:3191: SER ==> SET
data/molmodel-3.0~svn842/resources/tinker_amber99_clean.prm:3192: SER ==> SET
data/molmodel-3.0~svn842/resources/serine_test.pdb:7: SER ==> SET
data/molmodel-3.0~svn842/resources/serine_test.pdb:8: SER ==> SET
data/molmodel-3.0~svn842/resources/serine_test.pdb:9: SER ==> SET
data/molmodel-3.0~svn842/resources/serine_test.pdb:10: SER ==> SET
data/molmodel-3.0~svn842/resources/serine_test.pdb:11: SER ==> SET
data/molmodel-3.0~svn842/resources/serine_test.pdb:12: SER ==> SET
data/molmodel-3.0~svn842/resources/serine_test.pdb:13: SER ==> SET
data/molmodel-3.0~svn842/resources/serine_test.pdb:14: SER ==> SET
data/molmodel-3.0~svn842/resources/serine_test.pdb:15: SER ==> SET
data/molmodel-3.0~svn842/resources/serine_test.pdb:16: SER ==> SET
data/molmodel-3.0~svn842/resources/serine_test.pdb:17: SER ==> SET
data/molmodel-3.0~svn842/resources/tinker_amber99_sam.prm:458: SER ==> SET
data/molmodel-3.0~svn842/resources/tinker_amber99_sam.prm:459: SER ==> SET
data/molmodel-3.0~svn842/resources/tinker_amber99_sam.prm:460: SER ==> SET
data/molmodel-3.0~svn842/resources/tinker_amber99_sam.prm:461: SER ==> SET
data/molmodel-3.0~svn842/resources/tinker_amber99_sam.prm:462: SER ==> SET
data/molmodel-3.0~svn842/resources/tinker_amber99_sam.prm:463: SER ==> SET
data/molmodel-3.0~svn842/resources/tinker_amber99_sam.prm:609: SER ==> SET
data/molmodel-3.0~svn842/resources/tinker_amber99_sam.prm:610: SER ==> SET
data/molmodel-3.0~svn842/resources/tinker_amber99_sam.prm:611: SER ==> SET
data/molmodel-3.0~svn842/resources/tinker_amber99_sam.prm:612: SER ==> SET
data/molmodel-3.0~svn842/resources/tinker_amber99_sam.prm:613: SER ==> SET
data/molmodel-3.0~svn842/resources/tinker_amber99_sam.prm:614: SER ==> SET
data/molmodel-3.0~svn842/resources/tinker_amber99_sam.prm:3055: SER ==> SET
data/molmodel-3.0~svn842/resources/tinker_amber99_sam.prm:3056: SER ==> SET
data/molmodel-3.0~svn842/resources/tinker_amber99_sam.prm:3057: SER ==> SET
data/molmodel-3.0~svn842/resources/tinker_amber99_sam.prm:3058: SER ==> SET
data/molmodel-3.0~svn842/resources/tinker_amber99_sam.prm:3059: SER ==> SET
data/molmodel-3.0~svn842/resources/tinker_amber99_sam.prm:3060: SER ==> SET
data/molmodel-3.0~svn842/resources/tinker_amber99_sam.prm:3206: SER ==> SET
data/molmodel-3.0~svn842/resources/tinker_amber99_sam.prm:3207: SER ==> SET
data/molmodel-3.0~svn842/resources/tinker_amber99_sam.prm:3208: SER ==> SET
data/molmodel-3.0~svn842/resources/tinker_amber99_sam.prm:3209: SER ==> SET
data/molmodel-3.0~svn842/resources/tinker_amber99_sam.prm:3210: SER ==> SET
data/molmodel-3.0~svn842/resources/tinker_amber99_sam.prm:3211: SER ==> SET
data/molmodel-3.0~svn842/resources/amber99.prm:459: SER ==> SET
data/molmodel-3.0~svn842/resources/amber99.prm:460: SER ==> SET
data/molmodel-3.0~svn842/resources/amber99.prm:461: SER ==> SET
data/molmodel-3.0~svn842/resources/amber99.prm:462: SER ==> SET
data/molmodel-3.0~svn842/resources/amber99.prm:463: SER ==> SET
data/molmodel-3.0~svn842/resources/amber99.prm:464: SER ==> SET
data/molmodel-3.0~svn842/resources/amber99.prm:610: SER ==> SET
data/molmodel-3.0~svn842/resources/amber99.prm:611: SER ==> SET
data/molmodel-3.0~svn842/resources/amber99.prm:612: SER ==> SET
data/molmodel-3.0~svn842/resources/amber99.prm:613: SER ==> SET
data/molmodel-3.0~svn842/resources/amber99.prm:614: SER ==> SET
data/molmodel-3.0~svn842/resources/amber99.prm:615: SER ==> SET
data/molmodel-3.0~svn842/resources/amber99.prm:3045: SER ==> SET
data/molmodel-3.0~svn842/resources/amber99.prm:3046: SER ==> SET
data/molmodel-3.0~svn842/resources/amber99.prm:3047: SER ==> SET
data/molmodel-3.0~svn842/resources/amber99.prm:3048: SER ==> SET
data/molmodel-3.0~svn842/resources/amber99.prm:3049: SER ==> SET
data/molmodel-3.0~svn842/resources/amber99.prm:3050: SER ==> SET
data/molmodel-3.0~svn842/resources/amber99.prm:3196: SER ==> SET
data/molmodel-3.0~svn842/resources/amber99.prm:3197: SER ==> SET
data/molmodel-3.0~svn842/resources/amber99.prm:3198: SER ==> SET
data/molmodel-3.0~svn842/resources/amber99.prm:3199: SER ==> SET
data/molmodel-3.0~svn842/resources/amber99.prm:3200: SER ==> SET
data/molmodel-3.0~svn842/resources/amber99.prm:3201: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:720: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:721: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:723: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:725: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:742: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:748: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:754: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:758: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:790: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:814: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:816: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1136: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1136: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1138: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1143: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1143: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1144: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1145: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1151: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1151: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1152: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1154: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1154: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1155: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1155: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1156: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1156: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1158: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1162: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1165: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1166: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1167: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1172: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1173: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1176: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1179: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1179: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1182: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1183: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1184: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1184: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1186: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1187: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1188: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1190: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1191: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1193: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1194: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1195: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1195: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1196: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1198: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1199: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1199: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1199: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1199: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1206: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1207: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1207: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1208: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1210: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1210: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1211: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1212: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1215: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1216: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1220: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1223: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1224: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1228: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1231: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1231: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1234: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1234: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1236: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1237: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1243: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1245: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1245: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1246: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1249: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1250: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1250: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1252: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1257: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1257: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1259: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1265: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1267: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1269: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1270: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1270: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1271: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1273: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1274: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1274: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1275: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1277: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1283: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1284: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1289: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1289: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1291: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1291: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1291: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1293: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1295: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1295: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1299: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1302: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1302: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1302: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1303: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1303: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1303: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1307: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1308: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1309: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1310: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1311: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1315: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1317: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1317: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1318: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1319: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1319: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1319: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1321: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1323: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1323: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1324: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1326: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1331: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1331: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1332: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1333: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1335: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1336: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1337: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1341: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1341: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1343: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1345: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1348: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1349: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1350: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1350: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1352: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1357: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1358: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1359: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1362: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1362: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1376: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1379: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1379: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1380: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1384: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1384: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1387: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1388: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1389: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1391: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1394: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1394: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1395: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1396: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1397: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1399: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1401: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1405: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1405: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1408: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1409: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1410: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1410: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1411: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1411: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1413: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1414: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1419: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1420: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1421: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1427: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1428: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1428: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1429: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1430: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1431: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:1435: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:62093: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:62099: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:62131: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:62189: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:62190: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:62201: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:62221: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:62293: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:62295: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:62309: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:62321: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:62327: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:62336: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:62338: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:62345: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:62348: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:62377: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:62423: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:62469: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:62486: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:62488: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:62561: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:62565: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:62616: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:62648: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:62651: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:62683: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:62703: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:62715: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:62718: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:62743: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:62754: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:62768: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:62796: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:62810: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:62835: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:62846: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:62852: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:62856: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:62871: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:62893: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:62984: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:62993: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:63016: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:63018: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:63036: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:63081: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:63086: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:63135: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:63171: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:63183: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:63237: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:63270: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:63277: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:63313: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:63314: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:63341: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:63417: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:63437: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:63442: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:63453: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:63479: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:63496: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:63501: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:63519: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:63586: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:63589: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:63599: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:63679: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:63713: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:63739: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:63744: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:63747: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:63759: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:63780: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:63793: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:63801: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:63808: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:63840: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:63909: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:63922: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:63964: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:63974: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:63995: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:63998: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:63999: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:64015: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:64043: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:64048: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:64095: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:64123: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:64130: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:64131: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:64138: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:64142: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:64143: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:64189: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:64204: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:64219: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:64231: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:64242: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:64296: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:64317: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:64328: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:64334: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:64353: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:64354: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:64355: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:64371: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:64384: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:64385: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:64406: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:64428: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:64481: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:64483: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:64502: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:64506: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:64542: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:64548: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:64563: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:64612: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:64616: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:64630: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:64662: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:64698: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:64709: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:64718: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:64736: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:64802: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:64822: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:64826: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:64858: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:64859: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:65006: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:65042: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:65050: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:65061: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:65142: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:65153: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:65168: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:65202: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:65232: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:65234: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:65243: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:65262: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:65272: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:65299: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:65331: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:65375: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:65377: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:65414: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:65433: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:65442: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:65443: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:65449: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:65459: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:65468: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:65483: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:65523: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:65540: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:65549: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:65617: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:65630: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:65640: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:65649: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:65656: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:65678: SER ==> SET
data/molmodel-3.0~svn842/resources/structures/1FFK.pdb:65723: SER ==> SET
data/molmodel-3.0~svn842/resources/SantaLuciaParams/2MG/2MG.pdb:39: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/2MG/2MG.pdb:40: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/2MG/2MG.pdb:41: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/2MG/2MG.pdb:42: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/2MG/2MG.pdb:43: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/2MG/2MG.pdb:44: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/2MG/2MG.pdb:45: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/2MG/2MG.pdb:46: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/2MG/2MG.pdb:47: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/2MG/2MG.pdb:48: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/2MG/2MG.pdb:49: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/2MG/2MG.pdb:50: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/2MG/2MG.pdb:51: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/2MG/2MG.pdb:52: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/2MG/2MG.pdb:53: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/2MG/2MG.pdb:54: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/2MG/2MG.pdb:55: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/2MG/2MG.pdb:56: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/2MG/2MG.pdb:57: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/2MG/2MG.pdb:58: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/2MG/2MG.pdb:59: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/2MG/2MG.pdb:60: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/2MG/2MG.pdb:61: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/2MG/2MG.pdb:62: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/2MG/2MG.pdb:63: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/2MG/2MG.pdb:64: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/2MG/2MG.pdb:65: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/2MG/2MG.pdb:66: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/2MG/2MG.pdb:67: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/2MG/2MG.pdb:68: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/2MG/2MG.pdb:69: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/2MG/2MG.pdb:70: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/2MG/2MG.pdb:71: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/2MG/2MG.pdb:72: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/2MG/2MG.pdb:73: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/2MG/2MG.pdb:74: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/2MG/2MG.pdb:75: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/2MG/olderParams.prm:458: SER ==> SET
data/molmodel-3.0~svn842/resources/SantaLuciaParams/2MG/olderParams.prm:459: SER ==> SET
data/molmodel-3.0~svn842/resources/SantaLuciaParams/2MG/olderParams.prm:460: SER ==> SET
data/molmodel-3.0~svn842/resources/SantaLuciaParams/2MG/olderParams.prm:461: SER ==> SET
data/molmodel-3.0~svn842/resources/SantaLuciaParams/2MG/olderParams.prm:462: SER ==> SET
data/molmodel-3.0~svn842/resources/SantaLuciaParams/2MG/olderParams.prm:463: SER ==> SET
data/molmodel-3.0~svn842/resources/SantaLuciaParams/2MG/olderParams.prm:609: SER ==> SET
data/molmodel-3.0~svn842/resources/SantaLuciaParams/2MG/olderParams.prm:610: SER ==> SET
data/molmodel-3.0~svn842/resources/SantaLuciaParams/2MG/olderParams.prm:611: SER ==> SET
data/molmodel-3.0~svn842/resources/SantaLuciaParams/2MG/olderParams.prm:612: SER ==> SET
data/molmodel-3.0~svn842/resources/SantaLuciaParams/2MG/olderParams.prm:613: SER ==> SET
data/molmodel-3.0~svn842/resources/SantaLuciaParams/2MG/olderParams.prm:614: SER ==> SET
data/molmodel-3.0~svn842/resources/SantaLuciaParams/2MG/olderParams.prm:3036: SER ==> SET
data/molmodel-3.0~svn842/resources/SantaLuciaParams/2MG/olderParams.prm:3037: SER ==> SET
data/molmodel-3.0~svn842/resources/SantaLuciaParams/2MG/olderParams.prm:3038: SER ==> SET
data/molmodel-3.0~svn842/resources/SantaLuciaParams/2MG/olderParams.prm:3039: SER ==> SET
data/molmodel-3.0~svn842/resources/SantaLuciaParams/2MG/olderParams.prm:3040: SER ==> SET
data/molmodel-3.0~svn842/resources/SantaLuciaParams/2MG/olderParams.prm:3041: SER ==> SET
data/molmodel-3.0~svn842/resources/SantaLuciaParams/2MG/olderParams.prm:3187: SER ==> SET
data/molmodel-3.0~svn842/resources/SantaLuciaParams/2MG/olderParams.prm:3188: SER ==> SET
data/molmodel-3.0~svn842/resources/SantaLuciaParams/2MG/olderParams.prm:3189: SER ==> SET
data/molmodel-3.0~svn842/resources/SantaLuciaParams/2MG/olderParams.prm:3190: SER ==> SET
data/molmodel-3.0~svn842/resources/SantaLuciaParams/2MG/olderParams.prm:3191: SER ==> SET
data/molmodel-3.0~svn842/resources/SantaLuciaParams/2MG/olderParams.prm:3192: SER ==> SET
data/molmodel-3.0~svn842/resources/SantaLuciaParams/DMG/DMG.pdb:42: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/DMG/DMG.pdb:43: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/DMG/DMG.pdb:44: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/DMG/DMG.pdb:45: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/DMG/DMG.pdb:46: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/DMG/DMG.pdb:47: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/DMG/DMG.pdb:48: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/DMG/DMG.pdb:49: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/DMG/DMG.pdb:50: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/DMG/DMG.pdb:51: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/DMG/DMG.pdb:52: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/DMG/DMG.pdb:53: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/DMG/DMG.pdb:54: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/DMG/DMG.pdb:55: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/DMG/DMG.pdb:56: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/DMG/DMG.pdb:57: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/DMG/DMG.pdb:58: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/DMG/DMG.pdb:59: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/DMG/DMG.pdb:60: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/DMG/DMG.pdb:61: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/DMG/DMG.pdb:62: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/DMG/DMG.pdb:63: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/DMG/DMG.pdb:64: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/DMG/DMG.pdb:65: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/DMG/DMG.pdb:66: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/DMG/DMG.pdb:67: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/DMG/DMG.pdb:68: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/DMG/DMG.pdb:69: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/DMG/DMG.pdb:70: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/DMG/DMG.pdb:71: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/DMG/DMG.pdb:72: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/DMG/DMG.pdb:73: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/DMG/DMG.pdb:74: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/DMG/DMG.pdb:75: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/DMG/DMG.pdb:76: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/DMG/DMG.pdb:77: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/DMG/DMG.pdb:78: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/DMG/DMG.pdb:79: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/DMG/DMG.pdb:80: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/DMG/DMG.pdb:81: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/7MG/7MG.pdb:40: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/7MG/7MG.pdb:41: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/7MG/7MG.pdb:42: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/7MG/7MG.pdb:43: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/7MG/7MG.pdb:44: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/7MG/7MG.pdb:45: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/7MG/7MG.pdb:46: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/7MG/7MG.pdb:47: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/7MG/7MG.pdb:48: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/7MG/7MG.pdb:49: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/7MG/7MG.pdb:50: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/7MG/7MG.pdb:51: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/7MG/7MG.pdb:52: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/7MG/7MG.pdb:53: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/7MG/7MG.pdb:54: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/7MG/7MG.pdb:55: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/7MG/7MG.pdb:56: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/7MG/7MG.pdb:57: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/7MG/7MG.pdb:58: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/7MG/7MG.pdb:59: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/7MG/7MG.pdb:60: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/7MG/7MG.pdb:61: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/7MG/7MG.pdb:62: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/7MG/7MG.pdb:63: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/7MG/7MG.pdb:64: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/7MG/7MG.pdb:65: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/7MG/7MG.pdb:66: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/7MG/7MG.pdb:67: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/7MG/7MG.pdb:68: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/7MG/7MG.pdb:69: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/7MG/7MG.pdb:70: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/7MG/7MG.pdb:71: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/7MG/7MG.pdb:72: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/7MG/7MG.pdb:73: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/7MG/7MG.pdb:74: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/7MG/7MG.pdb:75: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/7MG/7MG.pdb:76: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/7MG/7MG.pdb:77: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/MRG/MRG.pdb:39: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/MRG/MRG.pdb:40: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/MRG/MRG.pdb:41: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/MRG/MRG.pdb:42: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/MRG/MRG.pdb:43: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/MRG/MRG.pdb:44: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/MRG/MRG.pdb:45: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/MRG/MRG.pdb:46: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/MRG/MRG.pdb:47: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/MRG/MRG.pdb:48: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/MRG/MRG.pdb:49: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/MRG/MRG.pdb:50: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/MRG/MRG.pdb:51: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/MRG/MRG.pdb:52: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/MRG/MRG.pdb:53: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/MRG/MRG.pdb:54: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/MRG/MRG.pdb:55: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/MRG/MRG.pdb:56: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/MRG/MRG.pdb:57: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/MRG/MRG.pdb:58: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/MRG/MRG.pdb:59: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/MRG/MRG.pdb:60: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/MRG/MRG.pdb:61: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/MRG/MRG.pdb:62: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/MRG/MRG.pdb:63: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/MRG/MRG.pdb:64: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/MRG/MRG.pdb:65: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/MRG/MRG.pdb:66: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/MRG/MRG.pdb:67: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/MRG/MRG.pdb:68: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/MRG/MRG.pdb:69: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/MRG/MRG.pdb:70: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/MRG/MRG.pdb:71: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/MRG/MRG.pdb:72: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/MRG/MRG.pdb:73: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/MRG/MRG.pdb:74: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/MRG/MRG.pdb:75: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/1MG/1MG.pdb:39: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/1MG/1MG.pdb:40: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/1MG/1MG.pdb:41: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/1MG/1MG.pdb:42: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/1MG/1MG.pdb:43: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/1MG/1MG.pdb:44: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/1MG/1MG.pdb:45: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/1MG/1MG.pdb:46: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/1MG/1MG.pdb:47: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/1MG/1MG.pdb:48: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/1MG/1MG.pdb:49: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/1MG/1MG.pdb:50: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/1MG/1MG.pdb:51: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/1MG/1MG.pdb:52: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/1MG/1MG.pdb:53: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/1MG/1MG.pdb:54: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/1MG/1MG.pdb:55: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/1MG/1MG.pdb:56: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/1MG/1MG.pdb:57: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/1MG/1MG.pdb:58: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/1MG/1MG.pdb:59: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/1MG/1MG.pdb:60: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/1MG/1MG.pdb:61: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/1MG/1MG.pdb:62: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/1MG/1MG.pdb:63: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/1MG/1MG.pdb:64: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/1MG/1MG.pdb:65: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/1MG/1MG.pdb:66: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/1MG/1MG.pdb:67: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/1MG/1MG.pdb:68: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/1MG/1MG.pdb:69: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/1MG/1MG.pdb:70: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/1MG/1MG.pdb:71: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/1MG/1MG.pdb:72: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/1MG/1MG.pdb:73: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/1MG/1MG.pdb:74: CONECT ==> CONNECT
data/molmodel-3.0~svn842/resources/SantaLuciaParams/1MG/1MG.pdb:75: CONECT ==> CONNECT
data/molmodel-3.0~svn842/rna-dynamics/conf-explorer.2008.07.23.cpp:181: szie ==> size
data/molmodel-3.0~svn842/rna-dynamics/tinker_amber99_sam.prm:458: SER ==> SET
data/molmodel-3.0~svn842/rna-dynamics/tinker_amber99_sam.prm:459: SER ==> SET
data/molmodel-3.0~svn842/rna-dynamics/tinker_amber99_sam.prm:460: SER ==> SET
data/molmodel-3.0~svn842/rna-dynamics/tinker_amber99_sam.prm:461: SER ==> SET
data/molmodel-3.0~svn842/rna-dynamics/tinker_amber99_sam.prm:462: SER ==> SET
data/molmodel-3.0~svn842/rna-dynamics/tinker_amber99_sam.prm:463: SER ==> SET
data/molmodel-3.0~svn842/rna-dynamics/tinker_amber99_sam.prm:609: SER ==> SET
data/molmodel-3.0~svn842/rna-dynamics/tinker_amber99_sam.prm:610: SER ==> SET
data/molmodel-3.0~svn842/rna-dynamics/tinker_amber99_sam.prm:611: SER ==> SET
data/molmodel-3.0~svn842/rna-dynamics/tinker_amber99_sam.prm:612: SER ==> SET
data/molmodel-3.0~svn842/rna-dynamics/tinker_amber99_sam.prm:613: SER ==> SET
data/molmodel-3.0~svn842/rna-dynamics/tinker_amber99_sam.prm:614: SER ==> SET
data/molmodel-3.0~svn842/rna-dynamics/tinker_amber99_sam.prm:3055: SER ==> SET
data/molmodel-3.0~svn842/rna-dynamics/tinker_amber99_sam.prm:3056: SER ==> SET
data/molmodel-3.0~svn842/rna-dynamics/tinker_amber99_sam.prm:3057: SER ==> SET
data/molmodel-3.0~svn842/rna-dynamics/tinker_amber99_sam.prm:3058: SER ==> SET
data/molmodel-3.0~svn842/rna-dynamics/tinker_amber99_sam.prm:3059: SER ==> SET
data/molmodel-3.0~svn842/rna-dynamics/tinker_amber99_sam.prm:3060: SER ==> SET
data/molmodel-3.0~svn842/rna-dynamics/tinker_amber99_sam.prm:3206: SER ==> SET
data/molmodel-3.0~svn842/rna-dynamics/tinker_amber99_sam.prm:3207: SER ==> SET
data/molmodel-3.0~svn842/rna-dynamics/tinker_amber99_sam.prm:3208: SER ==> SET
data/molmodel-3.0~svn842/rna-dynamics/tinker_amber99_sam.prm:3209: SER ==> SET
data/molmodel-3.0~svn842/rna-dynamics/tinker_amber99_sam.prm:3210: SER ==> SET
data/molmodel-3.0~svn842/rna-dynamics/tinker_amber99_sam.prm:3211: SER ==> SET
data/molmodel-3.0~svn842/debian/patches/remove-failing-tests.patch:568: SER ==> SET
data/molmodel-3.0~svn842/debian/patches/remove-failing-tests.patch:569: SER ==> SET
data/molmodel-3.0~svn842/debian/patches/remove-failing-tests.patch:570: SER ==> SET
data/molmodel-3.0~svn842/debian/patches/remove-failing-tests.patch:571: SER ==> SET
data/molmodel-3.0~svn842/debian/patches/remove-failing-tests.patch:572: SER ==> SET
data/molmodel-3.0~svn842/debian/patches/remove-failing-tests.patch:573: SER ==> SET
data/molmodel-3.0~svn842/.pc/remove-failing-tests.patch/tests/TestPdb.cpp:55: SER ==> SET
data/molmodel-3.0~svn842/.pc/remove-failing-tests.patch/tests/TestPdb.cpp:56: SER ==> SET
data/molmodel-3.0~svn842/.pc/remove-failing-tests.patch/tests/TestPdb.cpp:57: SER ==> SET
data/molmodel-3.0~svn842/.pc/remove-failing-tests.patch/tests/TestPdb.cpp:58: SER ==> SET
data/molmodel-3.0~svn842/.pc/remove-failing-tests.patch/tests/TestPdb.cpp:59: SER ==> SET
data/molmodel-3.0~svn842/.pc/remove-failing-tests.patch/tests/TestPdb.cpp:60: SER ==> SET