data/plast-2.3.2+dfsg/README.md:29: softwares ==> software data/plast-2.3.2+dfsg/src/database/impl/ReadingFrameSequenceIterator.cpp:157: CANT ==> CAN'T data/plast-2.3.2+dfsg/src/database/impl/BufferedSequenceDatabase.cpp:370: acces ==> access data/plast-2.3.2+dfsg/src/database/impl/BasicSequenceBuilder.hpp:52: Desctructor ==> Destructor data/plast-2.3.2+dfsg/src/database/impl/BlastdbSequenceIterator.hpp:51: nin ==> inn, min, bin, nine data/plast-2.3.2+dfsg/src/database/impl/BlastdbSequenceIterator.hpp:143: usefull ==> useful data/plast-2.3.2+dfsg/src/database/impl/AminoAcidDatabaseQuickReader.hpp:79: ADN ==> AND data/plast-2.3.2+dfsg/src/database/impl/BlastdbFileIndexReader.hpp:84: ADN ==> AND data/plast-2.3.2+dfsg/src/database/impl/BlastdbFileIndexReader.hpp:206: usefull ==> useful data/plast-2.3.2+dfsg/src/database/impl/ReadingFrameSequenceIterator.hpp:55: adn ==> and data/plast-2.3.2+dfsg/src/database/impl/BlastdbDatabaseQuickReader.cpp:188: nin ==> inn, min, bin, nine data/plast-2.3.2+dfsg/src/database/impl/BufferedSequenceDatabase.hpp:577: Theshold ==> Threshold data/plast-2.3.2+dfsg/src/database/impl/BlastdbFileIndexReader.cpp:56: nin ==> inn, min, bin, nine data/plast-2.3.2+dfsg/src/database/impl/ReverseStrandSequenceIterator.hpp:58: adn ==> and data/plast-2.3.2+dfsg/src/database/impl/FastaDatabaseQuickReader.hpp:46: ADN ==> AND data/plast-2.3.2+dfsg/src/database/impl/DatabaseUtility.hpp:77: nin ==> inn, min, bin, nine data/plast-2.3.2+dfsg/src/database/api/ISequenceCache.hpp:86: euclidian ==> euclidean data/plast-2.3.2+dfsg/src/database/api/IDatabaseQuickReader.hpp:54: paramater ==> parameter data/plast-2.3.2+dfsg/src/database/api/IDatabaseQuickReader.hpp:107: ADN ==> AND data/plast-2.3.2+dfsg/src/database/api/ISequence.hpp:112: definiton ==> definition data/plast-2.3.2+dfsg/src/index/impl/AbstractDatabaseIndex.hpp:18: Implemtation ==> Implementation data/plast-2.3.2+dfsg/src/index/impl/retrievall.c:372: lentgh ==> length data/plast-2.3.2+dfsg/src/index/impl/DatabaseNucleotidIndexOptim.hpp:18: Implemtation ==> Implementation data/plast-2.3.2+dfsg/src/index/impl/DatabaseIndex.hpp:18: Implemtation ==> Implementation data/plast-2.3.2+dfsg/src/index/impl/DatabaseNucleotidIndex.hpp:18: Implemtation ==> Implementation data/plast-2.3.2+dfsg/src/index/api/IDatabaseIndex.hpp:149: choosen ==> chosen data/plast-2.3.2+dfsg/src/alignment/core/impl/BasicAlignmentContainer.hpp:85: Desctructor ==> Destructor data/plast-2.3.2+dfsg/src/alignment/core/impl/AlignmentContainerFactory.cpp:194: Shorcuts ==> Shortcuts data/plast-2.3.2+dfsg/src/alignment/core/impl/UngapAlignmentContainer.hpp:55: unecessary ==> unnecessary data/plast-2.3.2+dfsg/src/alignment/core/api/IAlignmentContainerVisitor.hpp:119: uggly ==> ugly data/plast-2.3.2+dfsg/src/alignment/core/api/Alignment.hpp:489: ADN ==> AND data/plast-2.3.2+dfsg/src/alignment/tools/impl/SemiGappedAlign.cpp:139: bookeeping ==> bookkeeping data/plast-2.3.2+dfsg/src/alignment/tools/impl/SemiGappedAlignTraceback.cpp:193: bookeeping ==> bookkeeping data/plast-2.3.2+dfsg/src/alignment/visitors/impl/TabulatedOutputVisitor.hpp:70: Desctructor ==> Destructor data/plast-2.3.2+dfsg/src/designpattern/impl/Property.hpp:168: Desctructor ==> Destructor data/plast-2.3.2+dfsg/src/designpattern/impl/Property.hpp:226: Desctructor ==> Destructor data/plast-2.3.2+dfsg/src/designpattern/impl/EventCatch.hpp:20: specifing ==> specifying data/plast-2.3.2+dfsg/src/seg/impl/seg.c:355: ans ==> and data/plast-2.3.2+dfsg/src/seg/impl/seg.c:360: ans ==> and data/plast-2.3.2+dfsg/src/seg/impl/seg.c:362: ans ==> and data/plast-2.3.2+dfsg/src/seg/impl/seg.c:375: ans ==> and data/plast-2.3.2+dfsg/src/seg/impl/seg.c:378: ans ==> and data/plast-2.3.2+dfsg/src/seg/impl/seg.c:382: ans ==> and data/plast-2.3.2+dfsg/src/seg/impl/seg.c:385: ans ==> and data/plast-2.3.2+dfsg/src/seg/impl/seg.c:398: ans ==> and data/plast-2.3.2+dfsg/src/seg/impl/seg.c:403: ans ==> and data/plast-2.3.2+dfsg/src/seg/impl/seg.c:405: ans ==> and data/plast-2.3.2+dfsg/src/seg/impl/seg.c:414: ans ==> and data/plast-2.3.2+dfsg/src/seg/impl/seg.c:425: ans ==> and data/plast-2.3.2+dfsg/src/seg/impl/seg.c:428: ans ==> and data/plast-2.3.2+dfsg/src/seg/impl/seg.c:439: ans ==> and data/plast-2.3.2+dfsg/src/algo/core/impl/AlgorithmPlastn.hpp:39: ADN ==> AND data/plast-2.3.2+dfsg/src/algo/core/impl/AlgorithmPlastn.hpp:39: ADN ==> AND data/plast-2.3.2+dfsg/src/algo/core/impl/AbstractAlgorithm.hpp:322: ADN ==> AND data/plast-2.3.2+dfsg/src/algo/core/impl/AbstractAlgorithm.hpp:354: ADN ==> AND data/plast-2.3.2+dfsg/src/algo/core/impl/AbstractAlgorithm.hpp:386: ADN ==> AND data/plast-2.3.2+dfsg/src/algo/core/impl/AbstractAlgorithm.hpp:386: ADN ==> AND data/plast-2.3.2+dfsg/src/algo/core/impl/DefaultAlgoEnvironment.cpp:189: ADN ==> AND data/plast-2.3.2+dfsg/src/algo/core/impl/DefaultAlgoEnvironment.cpp:189: ADN ==> AND data/plast-2.3.2+dfsg/src/algo/core/impl/DefaultAlgoEnvironment.cpp:254: paramter ==> parameter data/plast-2.3.2+dfsg/src/algo/core/impl/AbstractAlgorithm.cpp:254: ADN ==> AND data/plast-2.3.2+dfsg/src/algo/core/impl/AbstractAlgorithm.cpp:342: betweed ==> between data/plast-2.3.2+dfsg/src/algo/core/impl/AbstractAlgorithm.cpp:352: concurently ==> concurrently data/plast-2.3.2+dfsg/src/algo/core/impl/DefaultAlgoConfig.cpp:188: ND ==> AND, 2ND data/plast-2.3.2+dfsg/src/algo/core/impl/DefaultAlgoConfig.cpp:250: ND ==> AND, 2ND data/plast-2.3.2+dfsg/src/algo/core/impl/BasicAlgoIndexator.cpp:205: distingish ==> distinguish data/plast-2.3.2+dfsg/src/algo/core/api/IAlgoParameters.hpp:111: wirth ==> with, worth data/plast-2.3.2+dfsg/src/algo/core/api/IAlgoEnvironment.hpp:59: ellapsed ==> elapsed data/plast-2.3.2+dfsg/src/algo/core/api/IAlgoEnvironment.hpp:75: lauch ==> launch data/plast-2.3.2+dfsg/src/algo/core/api/IAlgoConfig.hpp:90: nin ==> inn, min, bin, nine data/plast-2.3.2+dfsg/src/algo/hits/ungap/UngapHitIteratorSSE16.cpp:78: overide ==> override data/plast-2.3.2+dfsg/src/algo/hits/common/AbstractHitIterator.cpp:125: theses ==> these, thesis data/plast-2.3.2+dfsg/src/algo/hits/hsp/HspGeneratorCmd.cpp:71: otpion ==> option data/plast-2.3.2+dfsg/src/algo/hits/hsp/HspGeneratorCmd.cpp:75: peraphs ==> perhaps data/plast-2.3.2+dfsg/src/algo/hits/seed/SeedHitIteratorCached.cpp:113: instanciate ==> instantiate data/plast-2.3.2+dfsg/src/algo/hits/seed/SeedHitIteratorCached.cpp:158: currenly ==> currently data/plast-2.3.2+dfsg/src/algo/hits/seed/SeedHitIteratorCached.cpp:170: currenly ==> currently data/plast-2.3.2+dfsg/src/launcher/jni/JniObsfucation.h:71: IHs ==> his data/plast-2.3.2+dfsg/src/launcher/observers/BargraphObserver.cpp:109: ellapsed ==> elapsed data/plast-2.3.2+dfsg/src/launcher/observers/BargraphObserver.cpp:109: ellapsed ==> elapsed data/plast-2.3.2+dfsg/src/launcher/observers/BargraphObserver.cpp:120: ellapsed ==> elapsed data/plast-2.3.2+dfsg/src/misc/impl/Option.hpp:73: Desctructor ==> Destructor data/plast-2.3.2+dfsg/src/misc/impl/Option.hpp:122: instanciation ==> instantiation data/plast-2.3.2+dfsg/src/misc/impl/Option.hpp:136: responsable ==> responsible data/plast-2.3.2+dfsg/src/misc/impl/Option.hpp:136: informations ==> information data/plast-2.3.2+dfsg/src/misc/api/CompleteSubjectDatabaseStats.hpp:14: Miscellanous ==> Miscellaneous data/plast-2.3.2+dfsg/src/misc/api/CompleteSubjectDatabaseStats.hpp:43: containting ==> containing data/plast-2.3.2+dfsg/src/misc/api/PlastStringsRepository.hpp:30: Miscellanous ==> Miscellaneous data/plast-2.3.2+dfsg/src/misc/api/PlastStringsRepository.hpp:127: peforming ==> performing data/plast-2.3.2+dfsg/src/misc/api/PlastStringsRepository.hpp:312: peforming ==> performing data/plast-2.3.2+dfsg/src/misc/api/macros.hpp:33: Miscellanous ==> Miscellaneous data/plast-2.3.2+dfsg/src/misc/api/macros.hpp:43: Mininum ==> Minimum data/plast-2.3.2+dfsg/src/misc/api/PlastStrings.hpp:49: ADN ==> AND data/plast-2.3.2+dfsg/src/misc/api/PlastStrings.hpp:49: ADN ==> AND data/plast-2.3.2+dfsg/src/misc/api/PlastStrings.hpp:50: ADN ==> AND data/plast-2.3.2+dfsg/src/misc/api/PlastStrings.hpp:50: ADN ==> AND data/plast-2.3.2+dfsg/src/misc/api/PlastStrings.hpp:201: ADN ==> AND data/plast-2.3.2+dfsg/src/misc/api/PlastStrings.hpp:406: peforming ==> performing data/plast-2.3.2+dfsg/src/misc/api/types.hpp:22: thoughout ==> throughout data/plast-2.3.2+dfsg/src/misc/api/types.hpp:64: Miscellanous ==> Miscellaneous data/plast-2.3.2+dfsg/src/misc/api/Vector.hpp:35: Miscellanous ==> Miscellaneous data/plast-2.3.2+dfsg/src/os/impl/DefaultOsFactory.hpp:23: dependant ==> dependent data/plast-2.3.2+dfsg/src/os/api/IOsFactory.hpp:57: direcly ==> directly data/plast-2.3.2+dfsg/src/os/api/IOsFactory.hpp:57: dependant ==> dependent data/plast-2.3.2+dfsg/src/os/api/IMemoryFile.hpp:39: tiem ==> time, item data/plast-2.3.2+dfsg/src/os/api/IMemoryFile.hpp:48: splitted ==> split data/plast-2.3.2+dfsg/src/os/api/IFile.hpp:54: paramater ==> parameter data/plast-2.3.2+dfsg/src/os/api/IThread.hpp:44: independant ==> independent data/plast-2.3.2+dfsg/src/os/api/IThread.hpp:121: refered ==> referred data/plast-2.3.2+dfsg/src/os/api/IThread.hpp:153: refered ==> referred data/plast-2.3.2+dfsg/src/seed/impl/AbstractSeedModel.cpp:85: Shorcuts ==> Shortcuts data/plast-2.3.2+dfsg/src/seed/impl/SubSeedModel.hpp:59: ND ==> AND, 2ND data/plast-2.3.2+dfsg/src/seed/impl/SubSeedModel.hpp:71: parallization ==> parallelization data/plast-2.3.2+dfsg/src/seed/impl/SubSeedModel.hpp:85: ND ==> AND, 2ND data/plast-2.3.2+dfsg/db/tursiops.fa:36571: TE ==> THE, BE, WE data/plast-2.3.2+dfsg/db/tursiops.fa:42793: EDE ==> EDGE data/plast-2.3.2+dfsg/db/tursiops.fa:57025: WEE ==> WE data/plast-2.3.2+dfsg/db/tursiops.fa:91781: LSAT ==> LAST, SLAT, SAT data/plast-2.3.2+dfsg/scripts/plast.sh:75: nin ==> inn, min, bin, nine data/plast-2.3.2+dfsg/debian/plast.1:31: peforming ==> performing data/plast-2.3.2+dfsg/debian/bin/plast:3: srcipts ==> scripts data/plast-2.3.2+dfsg/debian/bin/plast:90: nin ==> inn, min, bin, nine