data/r-bioc-bitseq-1.34.0+dfsg/configure:1774: Substitue ==> Substitute
data/r-bioc-bitseq-1.34.0+dfsg/configure.ac:9: Substitue ==> Substitute
data/r-bioc-bitseq-1.34.0+dfsg/inst/doc/BitSeq.R:55: hist ==> heist, his
data/r-bioc-bitseq-1.34.0+dfsg/inst/doc/BitSeq.Rnw:122: hist ==> heist, his
data/r-bioc-bitseq-1.34.0+dfsg/man/transcriptInfo.Rd:35: retruns ==> returns
data/r-bioc-bitseq-1.34.0+dfsg/src/FileHeader.cpp:45: succesful ==> successful
data/r-bioc-bitseq-1.34.0+dfsg/src/PosteriorSamples.cpp:60: trasposed ==> transposed
data/r-bioc-bitseq-1.34.0+dfsg/src/PosteriorSamples.h:26: assginment ==> assignment
data/r-bioc-bitseq-1.34.0+dfsg/src/PosteriorSamples.h:50: duplicats ==> duplicates
data/r-bioc-bitseq-1.34.0+dfsg/src/ReadDistribution.cpp:139: trE ==> tree
data/r-bioc-bitseq-1.34.0+dfsg/src/ReadDistribution.cpp:154: trE ==> tree
data/r-bioc-bitseq-1.34.0+dfsg/src/ReadDistribution.cpp:535: fo ==> of, for
data/r-bioc-bitseq-1.34.0+dfsg/src/ReadDistribution.h:122: trE ==> tree
data/r-bioc-bitseq-1.34.0+dfsg/src/TranscriptSequence.cpp:117: cacheing ==> caching
data/r-bioc-bitseq-1.34.0+dfsg/src/TranscriptSequence.cpp:126: cacheing ==> caching
data/r-bioc-bitseq-1.34.0+dfsg/src/TranscriptSequence.h:12: cacheing ==> caching
data/r-bioc-bitseq-1.34.0+dfsg/src/common.cpp:8: compileTime ==> compile time
data/r-bioc-bitseq-1.34.0+dfsg/src/common.cpp:12: compileTime ==> compile time
data/r-bioc-bitseq-1.34.0+dfsg/src/common.h:37: compileTime ==> compile time
data/r-bioc-bitseq-1.34.0+dfsg/src/estimateExpression.cpp:228: reseting ==> resetting
data/r-bioc-bitseq-1.34.0+dfsg/src/getGeneExpression.cpp:60: ouput ==> output
data/r-bioc-bitseq-1.34.0+dfsg/src/misc.h:39: fro ==> for, from
data/r-bioc-bitseq-1.34.0+dfsg/src/misc.h:57: fo ==> of, for
data/r-bioc-bitseq-1.34.0+dfsg/src/parseAlignment.cpp:72: readD ==> re-add, read
data/r-bioc-bitseq-1.34.0+dfsg/src/parseAlignment.cpp:103: readD ==> re-add, read
data/r-bioc-bitseq-1.34.0+dfsg/src/parseAlignment.cpp:104: readD ==> re-add, read
data/r-bioc-bitseq-1.34.0+dfsg/src/parseAlignment.cpp:169: readD ==> re-add, read
data/r-bioc-bitseq-1.34.0+dfsg/src/parseAlignment.cpp:175: readD ==> re-add, read
data/r-bioc-bitseq-1.34.0+dfsg/src/parseAlignment.cpp:178: readD ==> re-add, read
data/r-bioc-bitseq-1.34.0+dfsg/src/parseAlignment.cpp:183: readD ==> re-add, read
data/r-bioc-bitseq-1.34.0+dfsg/src/parseAlignment.cpp:252: readD ==> re-add, read
data/r-bioc-bitseq-1.34.0+dfsg/src/parseAlignment.cpp:279: readD ==> re-add, read
data/r-bioc-bitseq-1.34.0+dfsg/src/parseAlignment.cpp:283: readD ==> re-add, read
data/r-bioc-bitseq-1.34.0+dfsg/src/parseAlignment.cpp:285: readD ==> re-add, read
data/r-bioc-bitseq-1.34.0+dfsg/src/parseAlignment.cpp:347: readD ==> re-add, read
data/r-bioc-bitseq-1.34.0+dfsg/src/parseAlignment.cpp:437: readD ==> re-add, read
data/r-bioc-bitseq-1.34.0+dfsg/src/parseAlignment.cpp:439: readD ==> re-add, read
data/r-bioc-bitseq-1.34.0+dfsg/src/parseAlignment.cpp:453: readD ==> re-add, read
data/r-bioc-bitseq-1.34.0+dfsg/vignettes/BitSeq.Rnw:122: hist ==> heist, his