data/r-cran-alakazam-1.0.2/NEWS.md:100: accomodate ==> accommodate
data/r-cran-alakazam-1.0.2/man/MRCATest-class.Rd:35: occurance ==> occurrence
data/r-cran-alakazam-1.0.2/man/DiversityCurve-class.Rd:41: inverval ==> interval
data/r-cran-alakazam-1.0.2/man/DiversityCurve-class.Rd:45: inverval ==> interval
data/r-cran-alakazam-1.0.2/man/readIgphyml.Rd:75: Futher ==> Further
data/r-cran-alakazam-1.0.2/man/testDiversity.Rd:74: yeilding ==> yielding
data/r-cran-alakazam-1.0.2/man/ExampleDbChangeo.Rd:15: TIgGER ==> trigger
data/r-cran-alakazam-1.0.2/man/plotEdgeTest.Rd:56: hist ==> heist, his
data/r-cran-alakazam-1.0.2/man/collapseDuplicates.Rd:24: containg ==> containing
data/r-cran-alakazam-1.0.2/man/collapseDuplicates.Rd:39: numer ==> number
data/r-cran-alakazam-1.0.2/man/collapseDuplicates.Rd:64: unmodifed ==> unmodified
data/r-cran-alakazam-1.0.2/man/collapseDuplicates.Rd:99: identifer ==> identifier
data/r-cran-alakazam-1.0.2/man/ExampleDb.Rd:16: TIgGER ==> trigger
data/r-cran-alakazam-1.0.2/man/combineIgphyml.Rd:17: varable ==> variable
data/r-cran-alakazam-1.0.2/man/combineIgphyml.Rd:28: mutliple ==> multiple
data/r-cran-alakazam-1.0.2/man/aminoAcidProperties.Rd:133: occurance ==> occurrence
data/r-cran-alakazam-1.0.2/man/AbundanceCurve-class.Rd:35: inverval ==> interval
data/r-cran-alakazam-1.0.2/man/ChangeoClone-class.Rd:9: recontruction ==> reconstruction
data/r-cran-alakazam-1.0.2/man/nonsquareDist.Rd:13: contating ==> contacting, containing
data/r-cran-alakazam-1.0.2/man/plotMRCATest.Rd:56: hist ==> heist, his
data/r-cran-alakazam-1.0.2/src/RcppDistance.cpp:263: defien ==> define
data/r-cran-alakazam-1.0.2/vignettes/Topology-Vignette.Rmd:267: hist ==> heist, his
data/r-cran-alakazam-1.0.2/vignettes/Topology-Vignette.Rmd:324: hist ==> heist, his
data/r-cran-alakazam-1.0.2/vignettes/Diversity-Vignette.Rmd:38: inferrence ==> inference
data/r-cran-alakazam-1.0.2/vignettes/Lineage-Vignette.Rmd:114: insted ==> instead
data/r-cran-alakazam-1.0.2/vignettes/Lineage-Vignette.Rmd:190: insted ==> instead
data/r-cran-alakazam-1.0.2/R/AminoAcids.R:470: occurance ==> occurrence
data/r-cran-alakazam-1.0.2/R/Sequence.R:296: containg ==> containing
data/r-cran-alakazam-1.0.2/R/Sequence.R:306: numer ==> number
data/r-cran-alakazam-1.0.2/R/Sequence.R:325: unmodifed ==> unmodified
data/r-cran-alakazam-1.0.2/R/Sequence.R:356: identifer ==> identifier
data/r-cran-alakazam-1.0.2/R/Sequence.R:831: contating ==> contacting, containing
data/r-cran-alakazam-1.0.2/R/Diversity.R:161: Adjustement ==> Adjustment
data/r-cran-alakazam-1.0.2/R/Diversity.R:183: inferrence ==> inference
data/r-cran-alakazam-1.0.2/R/Diversity.R:263: boostrap ==> bootstrap
data/r-cran-alakazam-1.0.2/R/Diversity.R:268: inferrence ==> inference
data/r-cran-alakazam-1.0.2/R/Diversity.R:270: inferrence ==> inference
data/r-cran-alakazam-1.0.2/R/Diversity.R:276: argumets ==> arguments
data/r-cran-alakazam-1.0.2/R/Deprecated.R:141: yeilding ==> yielding
data/r-cran-alakazam-1.0.2/R/Classes.R:26: inverval ==> interval
data/r-cran-alakazam-1.0.2/R/Classes.R:66: inverval ==> interval
data/r-cran-alakazam-1.0.2/R/Classes.R:70: inverval ==> interval
data/r-cran-alakazam-1.0.2/R/Classes.R:148: recontruction ==> reconstruction
data/r-cran-alakazam-1.0.2/R/Classes.R:187: occurance ==> occurrence
data/r-cran-alakazam-1.0.2/R/Data.R:31: TIgGER ==> trigger
data/r-cran-alakazam-1.0.2/R/Data.R:67: TIgGER ==> trigger
data/r-cran-alakazam-1.0.2/R/Data.R:263: Ser ==> Set
data/r-cran-alakazam-1.0.2/R/Topology.R:620: hist ==> heist, his
data/r-cran-alakazam-1.0.2/R/Topology.R:706: hist ==> heist, his
data/r-cran-alakazam-1.0.2/R/Gene.R:294: separting ==> separating
data/r-cran-alakazam-1.0.2/R/Lineage.R:333: containg ==> containing
data/r-cran-alakazam-1.0.2/R/Lineage.R:395: containg ==> containing
data/r-cran-alakazam-1.0.2/R/Lineage.R:889: Futher ==> Further
data/r-cran-alakazam-1.0.2/R/Lineage.R:983: varable ==> variable
data/r-cran-alakazam-1.0.2/R/Lineage.R:990: mutliple ==> multiple
data/r-cran-alakazam-1.0.2/inst/doc/Topology-Vignette.Rmd:267: hist ==> heist, his
data/r-cran-alakazam-1.0.2/inst/doc/Topology-Vignette.Rmd:324: hist ==> heist, his
data/r-cran-alakazam-1.0.2/inst/doc/Lineage-Vignette.R:26: insted ==> instead
data/r-cran-alakazam-1.0.2/inst/doc/Lineage-Vignette.R:77: insted ==> instead
data/r-cran-alakazam-1.0.2/inst/doc/Diversity-Vignette.Rmd:38: inferrence ==> inference
data/r-cran-alakazam-1.0.2/inst/doc/Topology-Vignette.R:113: hist ==> heist, his
data/r-cran-alakazam-1.0.2/inst/doc/Topology-Vignette.R:139: hist ==> heist, his
data/r-cran-alakazam-1.0.2/inst/doc/Lineage-Vignette.Rmd:114: insted ==> instead
data/r-cran-alakazam-1.0.2/inst/doc/Lineage-Vignette.Rmd:190: insted ==> instead