data/sickle-1.33+git20150314.f3d6ae3/test/test.f.fastq:340: ba ==> by, be
data/sickle-1.33+git20150314.f3d6ae3/test/test.f.fastq:440: ba ==> by, be
data/sickle-1.33+git20150314.f3d6ae3/test/test.f.fastq:528: ba ==> by, be
data/sickle-1.33+git20150314.f3d6ae3/test/test.f.fastq:676: ba ==> by, be
data/sickle-1.33+git20150314.f3d6ae3/test/test.f.fastq:712: THT ==> THE, THAT
data/sickle-1.33+git20150314.f3d6ae3/test/test.f.fastq:796: ded ==> dead
data/sickle-1.33+git20150314.f3d6ae3/test/test.f.fastq:888: ba ==> by, be
data/sickle-1.33+git20150314.f3d6ae3/test/test.f.fastq:1000: ba ==> by, be
data/sickle-1.33+git20150314.f3d6ae3/test/test.f.fastq:1040: ba ==> by, be
data/sickle-1.33+git20150314.f3d6ae3/test/test.f.fastq:1088: ba ==> by, be
data/sickle-1.33+git20150314.f3d6ae3/test/test.f.fastq:1240: OT ==> TO, OF, OR
data/sickle-1.33+git20150314.f3d6ae3/test/test.f.fastq:1344: ba ==> by, be
data/sickle-1.33+git20150314.f3d6ae3/test/test.f.fastq:1564: OT ==> TO, OF, OR
data/sickle-1.33+git20150314.f3d6ae3/test/test.f.fastq:1736: ba ==> by, be
data/sickle-1.33+git20150314.f3d6ae3/test/test.f.fastq:1968: accET ==> accept
data/sickle-1.33+git20150314.f3d6ae3/test/test.f.fastq:2048: ba ==> by, be
data/sickle-1.33+git20150314.f3d6ae3/test/test.f.fastq:2276: ba ==> by, be
data/sickle-1.33+git20150314.f3d6ae3/test/test.f.fastq:2916: ba ==> by, be
data/sickle-1.33+git20150314.f3d6ae3/test/test.f.fastq:3332: ba ==> by, be
data/sickle-1.33+git20150314.f3d6ae3/test/test.f.fastq:3368: ba ==> by, be
data/sickle-1.33+git20150314.f3d6ae3/test/test.f.fastq:3388: ba ==> by, be
data/sickle-1.33+git20150314.f3d6ae3/test/test.f.fastq:3648: ba ==> by, be
data/sickle-1.33+git20150314.f3d6ae3/test/test.f.fastq:3836: OT ==> TO, OF, OR
data/sickle-1.33+git20150314.f3d6ae3/test/test.f.fastq:3896: OT ==> TO, OF, OR
data/sickle-1.33+git20150314.f3d6ae3/test/test.f.fastq:3916: ba ==> by, be
data/sickle-1.33+git20150314.f3d6ae3/test/test.f.fastq:4016: ba ==> by, be
data/sickle-1.33+git20150314.f3d6ae3/test/test.f.fastq:4084: ba ==> by, be
data/sickle-1.33+git20150314.f3d6ae3/test/test.f.fastq:4612: ba ==> by, be
data/sickle-1.33+git20150314.f3d6ae3/test/test.f.fastq:4680: TWOO ==> TWO, TOO
data/sickle-1.33+git20150314.f3d6ae3/test/test.f.fastq:4900: ba ==> by, be
data/sickle-1.33+git20150314.f3d6ae3/test/test.fastq:676: ba ==> by, be
data/sickle-1.33+git20150314.f3d6ae3/test/test.fastq:876: ba ==> by, be
data/sickle-1.33+git20150314.f3d6ae3/test/test.fastq:1052: ba ==> by, be
data/sickle-1.33+git20150314.f3d6ae3/test/test.fastq:1120: ba ==> by, be
data/sickle-1.33+git20150314.f3d6ae3/test/test.fastq:1312: ba ==> by, be
data/sickle-1.33+git20150314.f3d6ae3/test/test.fastq:1348: ba ==> by, be
data/sickle-1.33+git20150314.f3d6ae3/test/test.fastq:1420: THT ==> THE, THAT
data/sickle-1.33+git20150314.f3d6ae3/test/test.fastq:1588: ded ==> dead
data/sickle-1.33+git20150314.f3d6ae3/test/test.fastq:1772: ba ==> by, be
data/sickle-1.33+git20150314.f3d6ae3/test/test.fastq:1996: ba ==> by, be
data/sickle-1.33+git20150314.f3d6ae3/test/test.fastq:2008: ege ==> edge
data/sickle-1.33+git20150314.f3d6ae3/test/test.fastq:2076: ba ==> by, be
data/sickle-1.33+git20150314.f3d6ae3/test/test.fastq:2172: ba ==> by, be
data/sickle-1.33+git20150314.f3d6ae3/test/test.fastq:2440: ba ==> by, be
data/sickle-1.33+git20150314.f3d6ae3/test/test.fastq:2476: OT ==> TO, OF, OR
data/sickle-1.33+git20150314.f3d6ae3/test/test.fastq:2488: OT ==> TO, OF, OR
data/sickle-1.33+git20150314.f3d6ae3/test/test.fastq:2684: ba ==> by, be
data/sickle-1.33+git20150314.f3d6ae3/test/test.fastq:2744: ba ==> by, be
data/sickle-1.33+git20150314.f3d6ae3/test/test.fastq:3124: OT ==> TO, OF, OR
data/sickle-1.33+git20150314.f3d6ae3/test/test.fastq:3468: ba ==> by, be
data/sickle-1.33+git20150314.f3d6ae3/test/test.fastq:3480: ba ==> by, be
data/sickle-1.33+git20150314.f3d6ae3/test/test.fastq:3768: ba ==> by, be
data/sickle-1.33+git20150314.f3d6ae3/test/test.fastq:3932: accET ==> accept
data/sickle-1.33+git20150314.f3d6ae3/test/test.fastq:4092: ba ==> by, be
data/sickle-1.33+git20150314.f3d6ae3/test/test.fastq:4240: OT ==> TO, OF, OR
data/sickle-1.33+git20150314.f3d6ae3/test/test.fastq:4548: ba ==> by, be
data/sickle-1.33+git20150314.f3d6ae3/test/test.fastq:4840: ba ==> by, be
data/sickle-1.33+git20150314.f3d6ae3/test/test.fastq:4920: ba ==> by, be
data/sickle-1.33+git20150314.f3d6ae3/test/test.fastq:5072: ba ==> by, be
data/sickle-1.33+git20150314.f3d6ae3/test/test.fastq:5376: OT ==> TO, OF, OR
data/sickle-1.33+git20150314.f3d6ae3/test/test.fastq:5680: OT ==> TO, OF, OR
data/sickle-1.33+git20150314.f3d6ae3/test/test.fastq:5828: ba ==> by, be
data/sickle-1.33+git20150314.f3d6ae3/test/test.fastq:5880: ba ==> by, be
data/sickle-1.33+git20150314.f3d6ae3/test/test.fastq:6440: ba ==> by, be
data/sickle-1.33+git20150314.f3d6ae3/test/test.fastq:6660: ba ==> by, be
data/sickle-1.33+git20150314.f3d6ae3/test/test.fastq:6732: ba ==> by, be
data/sickle-1.33+git20150314.f3d6ae3/test/test.fastq:6772: ba ==> by, be
data/sickle-1.33+git20150314.f3d6ae3/test/test.fastq:6784: ba ==> by, be
data/sickle-1.33+git20150314.f3d6ae3/test/test.fastq:7292: ba ==> by, be
data/sickle-1.33+git20150314.f3d6ae3/test/test.fastq:7536: ba ==> by, be
data/sickle-1.33+git20150314.f3d6ae3/test/test.fastq:7668: OT ==> TO, OF, OR
data/sickle-1.33+git20150314.f3d6ae3/test/test.fastq:7788: OT ==> TO, OF, OR
data/sickle-1.33+git20150314.f3d6ae3/test/test.fastq:7828: ba ==> by, be
data/sickle-1.33+git20150314.f3d6ae3/test/test.fastq:8028: ba ==> by, be
data/sickle-1.33+git20150314.f3d6ae3/test/test.fastq:8120: OT ==> TO, OF, OR
data/sickle-1.33+git20150314.f3d6ae3/test/test.fastq:8164: ba ==> by, be
data/sickle-1.33+git20150314.f3d6ae3/test/test.fastq:8472: ba ==> by, be
data/sickle-1.33+git20150314.f3d6ae3/test/test.fastq:8856: ege ==> edge
data/sickle-1.33+git20150314.f3d6ae3/test/test.fastq:8944: ba ==> by, be
data/sickle-1.33+git20150314.f3d6ae3/test/test.fastq:8960: ba ==> by, be
data/sickle-1.33+git20150314.f3d6ae3/test/test.fastq:9144: ba ==> by, be
data/sickle-1.33+git20150314.f3d6ae3/test/test.fastq:9220: ba ==> by, be
data/sickle-1.33+git20150314.f3d6ae3/test/test.fastq:9288: ba ==> by, be
data/sickle-1.33+git20150314.f3d6ae3/test/test.fastq:9356: TWOO ==> TWO, TOO
data/sickle-1.33+git20150314.f3d6ae3/test/test.fastq:9796: ba ==> by, be
data/sickle-1.33+git20150314.f3d6ae3/test/test.r.fastq:560: ba ==> by, be
data/sickle-1.33+git20150314.f3d6ae3/test/test.r.fastq:656: ba ==> by, be
data/sickle-1.33+git20150314.f3d6ae3/test/test.r.fastq:1004: ege ==> edge
data/sickle-1.33+git20150314.f3d6ae3/test/test.r.fastq:1220: ba ==> by, be
data/sickle-1.33+git20150314.f3d6ae3/test/test.r.fastq:1244: OT ==> TO, OF, OR
data/sickle-1.33+git20150314.f3d6ae3/test/test.r.fastq:1372: ba ==> by, be
data/sickle-1.33+git20150314.f3d6ae3/test/test.r.fastq:1740: ba ==> by, be
data/sickle-1.33+git20150314.f3d6ae3/test/test.r.fastq:1884: ba ==> by, be
data/sickle-1.33+git20150314.f3d6ae3/test/test.r.fastq:2120: OT ==> TO, OF, OR
data/sickle-1.33+git20150314.f3d6ae3/test/test.r.fastq:2420: ba ==> by, be
data/sickle-1.33+git20150314.f3d6ae3/test/test.r.fastq:2460: ba ==> by, be
data/sickle-1.33+git20150314.f3d6ae3/test/test.r.fastq:2536: ba ==> by, be
data/sickle-1.33+git20150314.f3d6ae3/test/test.r.fastq:2688: OT ==> TO, OF, OR
data/sickle-1.33+git20150314.f3d6ae3/test/test.r.fastq:2840: OT ==> TO, OF, OR
data/sickle-1.33+git20150314.f3d6ae3/test/test.r.fastq:2940: ba ==> by, be
data/sickle-1.33+git20150314.f3d6ae3/test/test.r.fastq:3220: ba ==> by, be
data/sickle-1.33+git20150314.f3d6ae3/test/test.r.fastq:3392: ba ==> by, be
data/sickle-1.33+git20150314.f3d6ae3/test/test.r.fastq:3768: ba ==> by, be
data/sickle-1.33+git20150314.f3d6ae3/test/test.r.fastq:4060: OT ==> TO, OF, OR
data/sickle-1.33+git20150314.f3d6ae3/test/test.r.fastq:4236: ba ==> by, be
data/sickle-1.33+git20150314.f3d6ae3/test/test.r.fastq:4428: ege ==> edge
data/sickle-1.33+git20150314.f3d6ae3/test/test.r.fastq:4472: ba ==> by, be
data/sickle-1.33+git20150314.f3d6ae3/test/test.r.fastq:4480: ba ==> by, be
data/sickle-1.33+git20150314.f3d6ae3/test/test.r.fastq:4572: ba ==> by, be
data/sickle-1.33+git20150314.f3d6ae3/test/test.r.fastq:4644: ba ==> by, be