data/sift-4.0.3b/README:119: SUBSTITIONS ==> SUBSTITUTIONS
data/sift-4.0.3b/README:152: retrived ==> retrieved
data/sift-4.0.3b/README:323: positve ==> positive
data/sift-4.0.3b/README:417: followig ==> following
data/sift-4.0.3b/README:493: indicats ==> indicates, indicate
data/sift-4.0.3b/README_4.0.3:75: positve ==> positive
data/sift-4.0.3b/README_4.0.3:163: followig ==> following
data/sift-4.0.3b/README_4.0.3:239: indicats ==> indicates, indicate
data/sift-4.0.3b/src/PN_convert.h:68: possition ==> position
data/sift-4.0.3b/src/Alignment.h:17: multipe ==> multiple
data/sift-4.0.3b/src/choose_seqs_via_psiblastseedmedian.c:209: memeory ==> memory
data/sift-4.0.3b/src/consensus_to_seq.c:115: corresonding ==> corresponding
data/sift-4.0.3b/src/info_on_seqs.c:289: poistion ==> position
data/sift-4.0.3b/src/Clumping.c:139: statment ==> statement
data/sift-4.0.3b/src/Clumping.c:220: taht ==> that
data/sift-4.0.3b/src/Clumping.c:370: statment ==> statement
data/sift-4.0.3b/src/Alignment.c:1047: ony ==> only
data/sift-4.0.3b/src/Alignment.c:1186: lenght ==> length
data/sift-4.0.3b/src/Alignment.c:1462: andthe ==> and the
data/sift-4.0.3b/src/Alignment.c:1628: inthe ==> in the
data/sift-4.0.3b/src/Alignment.c:1725: inthe ==> in the
data/sift-4.0.3b/src/Alignment.c:2047: statment ==> statement
data/sift-4.0.3b/src/PN_convert.c:693: orignal ==> original
data/sift-4.0.3b/src/PN_convert.c:913: similiarity ==> similarity
data/sift-4.0.3b/src/PN_convert.c:1465: occurence ==> occurrence
data/sift-4.0.3b/src/Psiblast.c:144: apropriate ==> appropriate
data/sift-4.0.3b/src/Matrix_Info.c:374: positons ==> positions, positrons
data/sift-4.0.3b/src/Matrix_Info.c:633: corrent ==> correct, current
data/sift-4.0.3b/src/Matrix_Info.c:1002: allowd ==> allowed, allow, allows
data/sift-4.0.3b/src/Matrix_Info.c:1003: reall ==> real, really
data/sift-4.0.3b/test/lacI.fasta.query.out:124: TRE ==> TREE
data/sift-4.0.3b/test/lacI.fasta.query.out:171: ND ==> AND, 2ND
data/sift-4.0.3b/test/lacI.fasta.query.out:171: TE ==> THE, BE, WE
data/sift-4.0.3b/test/lacI.fasta.query.out:202: ND ==> AND, 2ND
data/sift-4.0.3b/test/lacI.fasta.query.out:264: ND ==> AND, 2ND
data/sift-4.0.3b/test/lacI.fasta.query.out:357: ND ==> AND, 2ND
data/sift-4.0.3b/test/lacI.fasta.query.out:388: ND ==> AND, 2ND
data/sift-4.0.3b/test/lacI.fasta.query.out:465: TRE ==> TREE
data/sift-4.0.3b/test/lacI.fasta.query.out:481: ND ==> AND, 2ND
data/sift-4.0.3b/test/lacI.fasta.query.out:496: TRE ==> TREE
data/sift-4.0.3b/test/lacI.fasta.query.out:636: ND ==> AND, 2ND
data/sift-4.0.3b/test/lacI.fasta.query.out:791: ND ==> AND, 2ND
data/sift-4.0.3b/test/lacI.fasta.query.out:822: ND ==> AND, 2ND
data/sift-4.0.3b/test/lacI.fasta.query.out:853: TE ==> THE, BE, WE
data/sift-4.0.3b/test/lacI.fasta.query.out:1132: ND ==> AND, 2ND
data/sift-4.0.3b/test/lacI.fasta.query.out:1178: TRE ==> TREE
data/sift-4.0.3b/test/lacI.fasta.query.out:1194: ND ==> AND, 2ND
data/sift-4.0.3b/test/lacI.fasta.query.out:1287: ND ==> AND, 2ND
data/sift-4.0.3b/test/lacI.fasta.query.out:1333: TRE ==> TREE
data/sift-4.0.3b/test/lacI.fasta.query.out:1380: ND ==> AND, 2ND
data/sift-4.0.3b/test/lacI.fasta.query.out:1395: TRE ==> TREE
data/sift-4.0.3b/test/lacI.fasta.query.out:1426: TRE ==> TREE
data/sift-4.0.3b/test/lacI.fasta.query.out:1457: TRE ==> TREE
data/sift-4.0.3b/test/lacI.fasta.query.out:1604: ND ==> AND, 2ND
data/sift-4.0.3b/test/lacI.fasta.query.out:1631: ND ==> AND, 2ND
data/sift-4.0.3b/test/lacI.fasta.query.out:1654: ND ==> AND, 2ND
data/sift-4.0.3b/test/lacI.fasta.query.out:1743: ND ==> AND, 2ND
data/sift-4.0.3b/test/lacI.fasta.query.out:1842: ND ==> AND, 2ND
data/sift-4.0.3b/test/lacI.fasta.query.out:1857: TRE ==> TREE
data/sift-4.0.3b/test/lacI.fasta.query.out:2082: ND ==> AND, 2ND
data/sift-4.0.3b/test/lacI.fasta.query.out:2082: TE ==> THE, BE, WE
data/sift-4.0.3b/test/lacI.fasta.query.out:2206: ND ==> AND, 2ND
data/sift-4.0.3b/test/lacI.fasta.query.out:2268: ND ==> AND, 2ND
data/sift-4.0.3b/test/lacI.fasta.query.out:2299: ND ==> AND, 2ND
data/sift-4.0.3b/test/lacI.fasta.query.out:2345: TRE ==> TREE
data/sift-4.0.3b/test/lacI.fasta.query.out:2407: TRE ==> TREE
data/sift-4.0.3b/test/lacI.fasta.query.out:2423: ND ==> AND, 2ND
data/sift-4.0.3b/test/lacI.fasta.query.out:2500: TRE ==> TREE
data/sift-4.0.3b/test/lacI.fasta.query.out:2547: ND ==> AND, 2ND
data/sift-4.0.3b/test/lacI.fasta.query.out:2578: ND ==> AND, 2ND
data/sift-4.0.3b/test/lacI.fasta.query.out:2640: ND ==> AND, 2ND
data/sift-4.0.3b/test/lacI.fasta.query.out:2795: ND ==> AND, 2ND
data/sift-4.0.3b/test/lacI.fasta.query.out:2826: TE ==> THE, BE, WE
data/sift-4.0.3b/test/lacI.fasta.query.out:2919: ND ==> AND, 2ND
data/sift-4.0.3b/test/lacI.fasta.query.out:2950: ND ==> AND, 2ND
data/sift-4.0.3b/test/lacI.fasta.query.out:3058: TRE ==> TREE
data/sift-4.0.3b/test/lacI.fasta.query.out:3151: TRE ==> TREE
data/sift-4.0.3b/test/lacI.fasta.query.out:3213: TRE ==> TREE
data/sift-4.0.3b/test/lacI.fasta.query.out:3244: TRE ==> TREE
data/sift-4.0.3b/test/lacI.fasta.query.out:3368: TRE ==> TREE
data/sift-4.0.3b/test/lacI.fasta.query.out:3384: ND ==> AND, 2ND
data/sift-4.0.3b/test/lacI.fasta.query.out:3508: ND ==> AND, 2ND
data/sift-4.0.3b/test/lacI.fasta.query.out:3597: ND ==> AND, 2ND
data/sift-4.0.3b/test/lacI.fasta.query.out:3624: ND ==> AND, 2ND
data/sift-4.0.3b/test/lacI.fasta.query.out:3651: ND ==> AND, 2ND
data/sift-4.0.3b/test/lacI.fasta.query.out:3678: ND ==> AND, 2ND
data/sift-4.0.3b/test/lacI.fasta.query.out:3751: ND ==> AND, 2ND
data/sift-4.0.3b/test/lacI.fasta.query.out:3873: ND ==> AND, 2ND
data/sift-4.0.3b/test/lacI.fasta.query.out:3911: TRE ==> TREE
data/sift-4.0.3b/test/lacI.fasta.query.out:3953: ND ==> AND, 2ND
data/sift-4.0.3b/test/lacI.fasta.query.out:3995: ND ==> AND, 2ND
data/sift-4.0.3b/test/lacI.fasta.query.out:4041: ND ==> AND, 2ND
data/sift-4.0.3b/test/lacI.fasta.query.out:4072: ND ==> AND, 2ND
data/sift-4.0.3b/test/lacI.fasta.query.out:4099: ND ==> AND, 2ND
data/sift-4.0.3b/test/lacI.fasta.query.out:4149: ND ==> AND, 2ND
data/sift-4.0.3b/test/lacI.fasta.query.out:4176: TE ==> THE, BE, WE
data/sift-4.0.3b/bin/SIFT_exome_nssnvs.pl:246: ans ==> and
data/sift-4.0.3b/bin/SIFT_exome_nssnvs.pl:268: ans ==> and
data/sift-4.0.3b/bin/SIFT_exome_nssnvs.pl:329: ans ==> and
data/sift-4.0.3b/bin/SIFT_exome_nssnvs.pl:338: ans ==> and
data/sift-4.0.3b/bin/SIFT_exome_indels.pl:102: Creat ==> Create
data/sift-4.0.3b/bin/SIFT_exome_indels.pl:335: infor ==> info
data/sift-4.0.3b/bin/SIFT_exome_indels.pl:480: modfied ==> modified
data/sift-4.0.3b/bin/SIFT_exome_indels.pl:624: ans ==> and
data/sift-4.0.3b/bin/SIFT_exome_indels.pl:645: ans ==> and
data/sift-4.0.3b/bin/SIFT_exome_indels.pl:648: ans ==> and
data/sift-4.0.3b/bin/SIFT_exome_indels.pl:684: ans ==> and
data/sift-4.0.3b/bin/SIFT_exome_indels.pl:706: ans ==> and
data/sift-4.0.3b/bin/SIFT_exome_indels.pl:767: ans ==> and
data/sift-4.0.3b/bin/SIFT_exome_indels.pl:776: ans ==> and
data/sift-4.0.3b/bin/Classify_SNPs_Indels.pl:608: occuring ==> occurring
data/sift-4.0.3b/bin/Classify_SNPs_Indels.pl:702: collapsable ==> collapsible
data/sift-4.0.3b/bin/Classify_SNPs_Indels.pl:887: befor ==> before
data/sift-4.0.3b/bin/Classify_SNPs_Indels.pl:1119: collapsable ==> collapsible
data/sift-4.0.3b/bin/Classify_SNPs_Indels.pl:1386: alignement ==> alignment
data/sift-4.0.3b/bin/detect_repeat.pl:24: handel ==> handle
data/sift-4.0.3b/bin/detect_repeat.pl:25: handel ==> handle
data/sift-4.0.3b/bin/detect_repeat.pl:26: handel ==> handle
data/sift-4.0.3b/bin/detect_repeat.pl:129: teh ==> the
data/sift-4.0.3b/bin/detect_repeat.pl:146: seqence ==> sequence
data/sift-4.0.3b/bin/detect_repeat.pl:240: witht ==> with
data/sift-4.0.3b/bin/snv_db_engine.pl:74: Creat ==> Create
data/sift-4.0.3b/bin/snv_db_engine.pl:576: artifically ==> artificially
data/sift-4.0.3b/bin/snv_db_engine.pl:631: correspondance ==> correspondence
data/sift-4.0.3b/bin/snv_db_engine.pl:842: ans ==> and
data/sift-4.0.3b/bin/snv_db_engine.pl:863: ans ==> and
data/sift-4.0.3b/bin/snv_db_engine.pl:866: ans ==> and
data/sift-4.0.3b/bin/snv_db_engine.pl:902: ans ==> and
data/sift-4.0.3b/bin/snv_db_engine.pl:924: ans ==> and
data/sift-4.0.3b/bin/snv_db_engine.pl:985: ans ==> and
data/sift-4.0.3b/bin/snv_db_engine.pl:994: ans ==> and
data/sift-4.0.3b/bin/SNPClassifier/Classify_SNPs.pl:590: collapsable ==> collapsible
data/sift-4.0.3b/bin/SNPClassifier/Classify_SNPs.pl:832: collapsable ==> collapsible
data/sift-4.0.3b/bin/SNPClassifier/Manuals/SNP_Classifier_Manual_041206.ps:430: ND ==> AND, 2ND
data/sift-4.0.3b/bin/SNPClassifier/Manuals/SNP_Classifier_Manual_041206.ps:1427: extrac ==> extract
data/sift-4.0.3b/bin/SNPClassifier/Manuals/SNP_Classifier_Manual_041206.ps:1973: desig ==> design
data/sift-4.0.3b/bin/SNPClassifier/Manuals/SNP_Classifier_Manual_041206.ps:1975: ned ==> need
data/sift-4.0.3b/bin/SNPClassifier/Manuals/SNP_Classifier_Manual_041206.ps:2098: mapp ==> map
data/sift-4.0.3b/bin/SNPClassifier/Manuals/SNP_Classifier_Manual_041206.ps:2482: leas ==> least, lease
data/sift-4.0.3b/bin/SNPClassifier/Manuals/SNP_Classifier_Manual_041206.ps:2499: erested ==> arrested, erected
data/sift-4.0.3b/bin/SNPClassifier/Manuals/SNP_Classifier_Manual_041206.ps:2783: templat ==> template
data/sift-4.0.3b/bin/SNPClassifier/Manuals/SNP_Classifier_Manual_041206.ps:3255: followin ==> following
data/sift-4.0.3b/bin/SNPClassifier/Manuals/SNP_Classifier_Manual_041206.ps:3513: creat ==> create
data/sift-4.0.3b/bin/SNPClassifier/Manuals/SNP_Classifier_Manual_041206.ps:3605: offets ==> offsets, offers
data/sift-4.0.3b/bin/SNPClassifier/Manuals/SNP_Classifier_Manual_041206.ps:3703: thi ==> the, this
data/sift-4.0.3b/bin/SNPClassifier/Manuals/SNP_Classifier_Manual_041206.ps:3986: te ==> the, be, we
data/sift-4.0.3b/bin/SNPClassifier/Manuals/SNP_Classifier_Manual_041206.ps:4431: fragement ==> fragment
data/sift-4.0.3b/bin/SNPClassifier/Manuals/SNP_Classifier_Manual_041206.ps:4590: Frequences ==> Frequencies
data/sift-4.0.3b/bin/SNPClassifier/Manuals/SNP_Classifier_Manual_041206.ps:5389: refere ==> refer, referee
data/sift-4.0.3b/bin/SNPClassifier/Manuals/SNP_Classifier_Manual_041206.ps:5512: differen ==> different
data/sift-4.0.3b/bin/SNPClassifier/Manuals/.svn/text-base/SNP_Classifier_Manual_041206.ps.svn-base:430: ND ==> AND, 2ND
data/sift-4.0.3b/bin/SNPClassifier/Manuals/.svn/text-base/SNP_Classifier_Manual_041206.ps.svn-base:1427: extrac ==> extract
data/sift-4.0.3b/bin/SNPClassifier/Manuals/.svn/text-base/SNP_Classifier_Manual_041206.ps.svn-base:1973: desig ==> design
data/sift-4.0.3b/bin/SNPClassifier/Manuals/.svn/text-base/SNP_Classifier_Manual_041206.ps.svn-base:1975: ned ==> need
data/sift-4.0.3b/bin/SNPClassifier/Manuals/.svn/text-base/SNP_Classifier_Manual_041206.ps.svn-base:2098: mapp ==> map
data/sift-4.0.3b/bin/SNPClassifier/Manuals/.svn/text-base/SNP_Classifier_Manual_041206.ps.svn-base:2482: leas ==> least, lease
data/sift-4.0.3b/bin/SNPClassifier/Manuals/.svn/text-base/SNP_Classifier_Manual_041206.ps.svn-base:2499: erested ==> arrested, erected
data/sift-4.0.3b/bin/SNPClassifier/Manuals/.svn/text-base/SNP_Classifier_Manual_041206.ps.svn-base:2783: templat ==> template
data/sift-4.0.3b/bin/SNPClassifier/Manuals/.svn/text-base/SNP_Classifier_Manual_041206.ps.svn-base:3255: followin ==> following
data/sift-4.0.3b/bin/SNPClassifier/Manuals/.svn/text-base/SNP_Classifier_Manual_041206.ps.svn-base:3513: creat ==> create
data/sift-4.0.3b/bin/SNPClassifier/Manuals/.svn/text-base/SNP_Classifier_Manual_041206.ps.svn-base:3605: offets ==> offsets, offers
data/sift-4.0.3b/bin/SNPClassifier/Manuals/.svn/text-base/SNP_Classifier_Manual_041206.ps.svn-base:3703: thi ==> the, this
data/sift-4.0.3b/bin/SNPClassifier/Manuals/.svn/text-base/SNP_Classifier_Manual_041206.ps.svn-base:3986: te ==> the, be, we
data/sift-4.0.3b/bin/SNPClassifier/Manuals/.svn/text-base/SNP_Classifier_Manual_041206.ps.svn-base:4431: fragement ==> fragment
data/sift-4.0.3b/bin/SNPClassifier/Manuals/.svn/text-base/SNP_Classifier_Manual_041206.ps.svn-base:4590: Frequences ==> Frequencies
data/sift-4.0.3b/bin/SNPClassifier/Manuals/.svn/text-base/SNP_Classifier_Manual_041206.ps.svn-base:5389: refere ==> refer, referee
data/sift-4.0.3b/bin/SNPClassifier/Manuals/.svn/text-base/SNP_Classifier_Manual_041206.ps.svn-base:5512: differen ==> different
data/sift-4.0.3b/web/index.html:415: MAPP ==> MAP
data/sift-4.0.3b/web/index.html:415: MAPP ==> MAP
data/sift-4.0.3b/web/blocks/contest.html:30: ot ==> to, of, or
data/sift-4.0.3b/web/blocks/biased_blocks.html:14: neccesarily ==> necessarily
data/sift-4.0.3b/web/blocks/blocks_biblio.html:24: dervied ==> derived
data/sift-4.0.3b/web/blocks/biassed_blocks.html:14: neccesarily ==> necessarily
data/sift-4.0.3b/web/www/2:48: coordiantes ==> coordinates
data/sift-4.0.3b/web/www/chr_coords_example_indels.html:50: followig ==> following
data/sift-4.0.3b/web/www/chr_coords_example_indels.html:91: occurr ==> occur
data/sift-4.0.3b/web/www/chr_coords_example_indels.html:109: indicats ==> indicates, indicate
data/sift-4.0.3b/web/www/formats.html:20: reverese ==> reverse
data/sift-4.0.3b/web/www/SIFT_help.html:81: tothe ==> to the
data/sift-4.0.3b/web/www/SIFT_help.html:390: intersted ==> interested
data/sift-4.0.3b/web/www/eating_out.html:13: reall ==> real, really
data/sift-4.0.3b/web/www/JWB_indels_ncbi36_fixed.txt:188334: ACN ==> CAN, ACNE
data/sift-4.0.3b/web/www/sift.html:70: MAPP ==> MAP
data/sift-4.0.3b/web/www/sift.html:70: MAPP ==> MAP
data/sift-4.0.3b/web/www/sift.html:70: MAPP ==> MAP
data/sift-4.0.3b/web/www/sift.html:73: MAPP ==> MAP
data/sift-4.0.3b/web/www/sift.html:75: MAPP ==> MAP
data/sift-4.0.3b/web/www/SIFTing_databases.html:80: alignmen ==> alignment
data/sift-4.0.3b/web/www/chr_coords_example_large_files.html:116: positve ==> positive
data/sift-4.0.3b/web/www/JWB_indels_ncbi37_fixed.txt:187831: ACN ==> CAN, ACNE
data/sift-4.0.3b/web/www/chr_coords_example.html:141: positve ==> positive
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:1: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:2: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:3: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:4: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:5: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:6: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:7: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:8: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:9: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:10: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:11: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:12: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:13: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:14: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:15: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:16: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:17: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:18: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:19: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:20: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:21: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:22: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:23: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:24: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:25: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:26: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:27: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:28: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:29: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:30: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:31: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:32: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:33: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:34: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:35: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:36: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:37: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:38: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:39: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:40: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:41: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:42: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:43: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:44: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:45: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:46: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:47: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:48: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:49: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:50: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:51: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:52: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:53: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:54: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:55: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:56: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:57: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:58: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:59: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:60: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:61: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:62: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:63: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:64: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:65: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:66: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:67: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:68: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:69: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:70: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:71: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:72: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:73: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:74: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:75: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:76: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:77: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:78: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:79: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:80: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:81: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:82: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:83: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:84: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:85: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:86: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:87: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:88: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:89: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:90: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:91: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:92: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:93: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:94: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:95: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:96: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:97: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:98: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:99: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:100: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:101: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:102: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:103: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:104: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:105: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:106: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:107: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:108: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:109: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:110: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:111: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:112: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:113: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:114: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/tmp:115: OT ==> TO, OF, OR
data/sift-4.0.3b/web/www/SIFT_on_databases/Table1_references.html:891: Diamon ==> Diamond
data/sift-4.0.3b/web/sift-bin/SIFT_feed_to_chr_coords.pl:322: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_feed_to_chr_coords.pl:344: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_feed_to_chr_coords.pl:405: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_feed_to_chr_coords.pl:414: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_020510.pl:51: Creat ==> Create
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_020510.pl:643: artifically ==> artificially
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_020510.pl:753: correspondance ==> correspondence
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_020510.pl:964: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_020510.pl:985: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_020510.pl:988: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_020510.pl:1024: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_020510.pl:1046: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_020510.pl:1107: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_020510.pl:1116: ans ==> and
data/sift-4.0.3b/web/sift-bin/index.pl:87: MAPP ==> MAP
data/sift-4.0.3b/web/sift-bin/index.pl:87: MAPP ==> MAP
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_old.pl:52: Creat ==> Create
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_old.pl:524: artifically ==> artificially
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_old.pl:627: correspondance ==> correspondence
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_old.pl:739: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_old.pl:760: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_old.pl:763: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_old.pl:799: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_old.pl:821: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_old.pl:882: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_old.pl:891: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_BLink_submit_PNtest.pl:163: checkpoing ==> checkpoint
data/sift-4.0.3b/web/sift-bin/SIFT_BLink_submit_PNtest.pl:202: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_BLink_submit_PNtest.pl:221: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_BLink_submit_PNtest.pl:224: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_BLink_submit_PNtest.pl:259: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_BLink_submit_PNtest.pl:280: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_BLink_submit_PNtest.pl:330: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_BLink_submit_PNtest.pl:339: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_pid_subst_dbsnp_submit.pl:204: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_pid_subst_dbsnp_submit.pl:225: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_pid_subst_dbsnp_submit.pl:228: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_pid_subst_dbsnp_submit.pl:264: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_pid_subst_dbsnp_submit.pl:286: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_pid_subst_dbsnp_submit.pl:335: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_pid_subst_dbsnp_submit.pl:344: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_pid_subst_dbsnp_submit.pl:579: artifically ==> artificially
data/sift-4.0.3b/web/sift-bin/SIFTING.csh:16: curruption ==> corruption
data/sift-4.0.3b/web/sift-bin/SIFTING2_for_subst_only.csh:26: curruption ==> corruption
data/sift-4.0.3b/web/sift-bin/SIFTING2_for_subst_only.csh:77: optin ==> option
data/sift-4.0.3b/web/sift-bin/SIFT_seq_submit2_121307.pl:178: checkpoing ==> checkpoint
data/sift-4.0.3b/web/sift-bin/SIFT_seq_submit2_121307.pl:222: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_seq_submit2_121307.pl:241: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_seq_submit2_121307.pl:244: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_seq_submit2_121307.pl:279: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_seq_submit2_121307.pl:300: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_seq_submit2_121307.pl:350: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_seq_submit2_121307.pl:359: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_indels_submit.pl:145: Creat ==> Create
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_indels_submit.pl:421: infor ==> info
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_indels_submit.pl:566: modfied ==> modified
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_indels_submit.pl:616: correspondance ==> correspondence
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_indels_submit.pl:767: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_indels_submit.pl:788: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_indels_submit.pl:791: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_indels_submit.pl:827: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_indels_submit.pl:849: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_indels_submit.pl:910: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_indels_submit.pl:919: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_refseq.pl:119: Creat ==> Create
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_refseq.pl:423: databse ==> database
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_refseq.pl:444: checkpoing ==> checkpoint
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_refseq.pl:638: artifically ==> artificially
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_refseq.pl:662: correspondance ==> correspondence
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_refseq.pl:680: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_refseq.pl:701: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_refseq.pl:704: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_refseq.pl:740: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_refseq.pl:762: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_refseq.pl:823: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_refseq.pl:832: ans ==> and
data/sift-4.0.3b/web/sift-bin/protomat.csh:25: mot ==> not
data/sift-4.0.3b/web/sift-bin/protomat.csh:48: mot ==> not
data/sift-4.0.3b/web/sift-bin/protomat.csh:72: mot ==> not
data/sift-4.0.3b/web/sift-bin/protomat.csh:73: mot ==> not
data/sift-4.0.3b/web/sift-bin/protomat.csh:104: mot ==> not
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_db_without_score.pl:53: Creat ==> Create
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_db_without_score.pl:497: checkpoing ==> checkpoint
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_db_without_score.pl:715: artifically ==> artificially
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_db_without_score.pl:747: correspondance ==> correspondence
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_db_without_score.pl:808: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_db_without_score.pl:829: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_db_without_score.pl:832: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_db_without_score.pl:868: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_db_without_score.pl:890: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_db_without_score.pl:951: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_db_without_score.pl:960: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_seq_submit.pl:228: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_seq_submit.pl:245: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_seq_submit.pl:248: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_seq_submit.pl:281: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_seq_submit.pl:300: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_seq_submit.pl:347: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_seq_submit.pl:356: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFTING2.csh.save:66: optin ==> option
data/sift-4.0.3b/web/sift-bin/PHAT_submission_backup.pl:58: specificed ==> specified
data/sift-4.0.3b/web/sift-bin/PHAT_submission_backup.pl:140: ans ==> and
data/sift-4.0.3b/web/sift-bin/PHAT_submission_backup.pl:157: ans ==> and
data/sift-4.0.3b/web/sift-bin/PHAT_submission_backup.pl:160: ans ==> and
data/sift-4.0.3b/web/sift-bin/PHAT_submission_backup.pl:193: ans ==> and
data/sift-4.0.3b/web/sift-bin/PHAT_submission_backup.pl:212: ans ==> and
data/sift-4.0.3b/web/sift-bin/PHAT_submission_backup.pl:259: ans ==> and
data/sift-4.0.3b/web/sift-bin/PHAT_submission_backup.pl:268: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_in_operator.pl:53: Creat ==> Create
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_in_operator.pl:496: artifically ==> artificially
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_in_operator.pl:528: correspondance ==> correspondence
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_in_operator.pl:589: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_in_operator.pl:610: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_in_operator.pl:613: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_in_operator.pl:649: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_in_operator.pl:671: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_in_operator.pl:732: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_in_operator.pl:741: ans ==> and
data/sift-4.0.3b/web/sift-bin/format.pl:136: checkpoing ==> checkpoint
data/sift-4.0.3b/web/sift-bin/SIFT_related_seqs_submit.pl:166: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_related_seqs_submit.pl:183: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_related_seqs_submit.pl:186: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_related_seqs_submit.pl:219: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_related_seqs_submit.pl:238: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_related_seqs_submit.pl:285: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_related_seqs_submit.pl:294: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_BLink_submit_031508.pl:160: checkpoing ==> checkpoint
data/sift-4.0.3b/web/sift-bin/SIFT_BLink_submit_031508.pl:199: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_BLink_submit_031508.pl:218: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_BLink_submit_031508.pl:221: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_BLink_submit_031508.pl:256: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_BLink_submit_031508.pl:277: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_BLink_submit_031508.pl:327: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_BLink_submit_031508.pl:336: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_single_db_submit.pl:53: Creat ==> Create
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_single_db_submit.pl:490: artifically ==> artificially
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_single_db_submit.pl:522: correspondance ==> correspondence
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_single_db_submit.pl:583: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_single_db_submit.pl:604: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_single_db_submit.pl:607: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_single_db_submit.pl:643: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_single_db_submit.pl:665: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_single_db_submit.pl:726: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_single_db_submit.pl:735: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_aligned_seqs_submit2.pl:180: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_aligned_seqs_submit2.pl:197: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_aligned_seqs_submit2.pl:200: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_aligned_seqs_submit2.pl:233: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_aligned_seqs_submit2.pl:252: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_aligned_seqs_submit2.pl:301: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_aligned_seqs_submit2.pl:310: ans ==> and
data/sift-4.0.3b/web/sift-bin/an_example_of_IP.pl:156: checkpoing ==> checkpoint
data/sift-4.0.3b/web/sift-bin/an_example_of_IP.pl:195: ans ==> and
data/sift-4.0.3b/web/sift-bin/an_example_of_IP.pl:214: ans ==> and
data/sift-4.0.3b/web/sift-bin/an_example_of_IP.pl:217: ans ==> and
data/sift-4.0.3b/web/sift-bin/an_example_of_IP.pl:252: ans ==> and
data/sift-4.0.3b/web/sift-bin/an_example_of_IP.pl:273: ans ==> and
data/sift-4.0.3b/web/sift-bin/an_example_of_IP.pl:323: ans ==> and
data/sift-4.0.3b/web/sift-bin/an_example_of_IP.pl:332: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_BLink_submit.pl.bak:135: checkpoing ==> checkpoint
data/sift-4.0.3b/web/sift-bin/SIFT_BLink_submit.pl.bak:174: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_BLink_submit.pl.bak:193: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_BLink_submit.pl.bak:196: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_BLink_submit.pl.bak:231: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_BLink_submit.pl.bak:252: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_BLink_submit.pl.bak:302: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_BLink_submit.pl.bak:311: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_feed_to_chr_coords_prod.pl:279: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_feed_to_chr_coords_prod.pl:301: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_feed_to_chr_coords_prod.pl:362: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_feed_to_chr_coords_prod.pl:371: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_dbSNP_submit.cgi:115: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_dbSNP_submit.cgi:134: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_dbSNP_submit.cgi:137: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_dbSNP_submit.cgi:172: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_dbSNP_submit.cgi:193: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_dbSNP_submit.cgi:236: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_dbSNP_submit.cgi:245: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_dbSNP_submit.cgi:350: artifically ==> artificially
data/sift-4.0.3b/web/sift-bin/seq_to_subfamily_block_backup.csh:134: mot ==> not
data/sift-4.0.3b/web/sift-bin/contact.pl:135: ans ==> and
data/sift-4.0.3b/web/sift-bin/contact.pl:152: ans ==> and
data/sift-4.0.3b/web/sift-bin/contact.pl:155: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_dbSNP_submit.pl:151: correspondance ==> correspondence
data/sift-4.0.3b/web/sift-bin/SIFT_dbSNP_submit.pl:168: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_dbSNP_submit.pl:189: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_dbSNP_submit.pl:192: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_dbSNP_submit.pl:228: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_dbSNP_submit.pl:250: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_dbSNP_submit.pl:299: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_dbSNP_submit.pl:308: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_dbSNP_submit.pl:454: retrive ==> retrieve
data/sift-4.0.3b/web/sift-bin/SIFT_dbSNP_submit.pl:572: artifically ==> artificially
data/sift-4.0.3b/web/sift-bin/SIFT_dbSNP_submit.pl:573: artifically ==> artificially
data/sift-4.0.3b/web/sift-bin/SIFTING2.csh:26: curruption ==> corruption
data/sift-4.0.3b/web/sift-bin/SIFTING2.csh:77: optin ==> option
data/sift-4.0.3b/web/sift-bin/SIFT_seq_submit2.pl.orig:217: checkpoing ==> checkpoint
data/sift-4.0.3b/web/sift-bin/SIFT_seq_submit2.pl.orig:248: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_seq_submit2.pl.orig:265: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_seq_submit2.pl.orig:268: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_seq_submit2.pl.orig:301: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_seq_submit2.pl.orig:320: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_seq_submit2.pl.orig:367: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_seq_submit2.pl.orig:376: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_dbSNP_submit_flatfile.pl:112: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_dbSNP_submit_flatfile.pl:131: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_dbSNP_submit_flatfile.pl:134: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_dbSNP_submit_flatfile.pl:169: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_dbSNP_submit_flatfile.pl:190: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_dbSNP_submit_flatfile.pl:233: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_dbSNP_submit_flatfile.pl:242: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_dbSNP_submit_flatfile.pl:345: artifically ==> artificially
data/sift-4.0.3b/web/sift-bin/protomat_motif.csh:30: mot ==> not
data/sift-4.0.3b/web/sift-bin/protomat_motif.csh:31: mot ==> not
data/sift-4.0.3b/web/sift-bin/protomat_motif.csh:52: jsut ==> just
data/sift-4.0.3b/web/sift-bin/protomat_motif.csh:57: mot ==> not
data/sift-4.0.3b/web/sift-bin/protomat_motif.csh:83: mot ==> not
data/sift-4.0.3b/web/sift-bin/protomat_motif.csh:84: mot ==> not
data/sift-4.0.3b/web/sift-bin/protomat_motif.csh:112: mot ==> not
data/sift-4.0.3b/web/sift-bin/SIFT_seq_submit2March272004.pl:133: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_seq_submit2March272004.pl:150: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_seq_submit2March272004.pl:153: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_seq_submit2March272004.pl:186: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_seq_submit2March272004.pl:205: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_seq_submit2March272004.pl:252: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_seq_submit2March272004.pl:261: ans ==> and
data/sift-4.0.3b/web/sift-bin/merge-gff.pl:95: doesnt ==> doesn't, does not
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_012510.pl:51: Creat ==> Create
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_012510.pl:596: artifically ==> artificially
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_012510.pl:706: correspondance ==> correspondence
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_012510.pl:917: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_012510.pl:938: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_012510.pl:941: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_012510.pl:977: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_012510.pl:999: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_012510.pl:1060: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_012510.pl:1069: ans ==> and
data/sift-4.0.3b/web/sift-bin/seq_to_subfamily_block.csh:205: mot ==> not
data/sift-4.0.3b/web/sift-bin/SIFT_seq_submit2_old.pl:182: checkpoing ==> checkpoint
data/sift-4.0.3b/web/sift-bin/SIFT_seq_submit2_old.pl:226: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_seq_submit2_old.pl:245: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_seq_submit2_old.pl:248: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_seq_submit2_old.pl:283: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_seq_submit2_old.pl:304: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_seq_submit2_old.pl:354: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_seq_submit2_old.pl:363: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_indels_submit_bkp.pl:125: Creat ==> Create
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_indels_submit_bkp.pl:412: correspondance ==> correspondence
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_indels_submit_bkp.pl:430: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_indels_submit_bkp.pl:451: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_indels_submit_bkp.pl:454: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_indels_submit_bkp.pl:490: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_indels_submit_bkp.pl:512: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_indels_submit_bkp.pl:573: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_indels_submit_bkp.pl:582: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFTING2_old.csh:75: optin ==> option
data/sift-4.0.3b/web/sift-bin/email_sift_aatable_results.pl:18: correspondance ==> correspondence
data/sift-4.0.3b/web/sift-bin/contact_old.pl:154: ans ==> and
data/sift-4.0.3b/web/sift-bin/contact_old.pl:171: ans ==> and
data/sift-4.0.3b/web/sift-bin/contact_old.pl:174: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_bin_query.pl:90: Creat ==> Create
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_bin_query.pl:530: checkpoing ==> checkpoint
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_bin_query.pl:728: artifically ==> artificially
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_bin_query.pl:752: correspondance ==> correspondence
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_bin_query.pl:770: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_bin_query.pl:791: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_bin_query.pl:794: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_bin_query.pl:830: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_bin_query.pl:852: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_bin_query.pl:913: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_bin_query.pl:922: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit.pl:94: Creat ==> Create
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit.pl:591: artifically ==> artificially
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit.pl:743: correspondance ==> correspondence
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit.pl:955: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit.pl:976: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit.pl:979: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit.pl:1015: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit.pl:1037: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit.pl:1098: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit.pl:1108: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_intersect_cds_submit.pl:172: correspondance ==> correspondence
data/sift-4.0.3b/web/sift-bin/SIFT_intersect_cds_submit.pl:279: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_intersect_cds_submit.pl:300: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_intersect_cds_submit.pl:303: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_intersect_cds_submit.pl:339: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_intersect_cds_submit.pl:360: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_intersect_cds_submit.pl:422: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_intersect_cds_submit.pl:431: ans ==> and
data/sift-4.0.3b/web/sift-bin/Classify_SNPs_Indels.pl:600: occuring ==> occurring
data/sift-4.0.3b/web/sift-bin/Classify_SNPs_Indels.pl:694: collapsable ==> collapsible
data/sift-4.0.3b/web/sift-bin/Classify_SNPs_Indels.pl:879: befor ==> before
data/sift-4.0.3b/web/sift-bin/Classify_SNPs_Indels.pl:1111: collapsable ==> collapsible
data/sift-4.0.3b/web/sift-bin/Classify_SNPs_Indels.pl:1378: alignement ==> alignment
data/sift-4.0.3b/web/sift-bin/SIFT_feed_to_chr_coords_bkp.pl:292: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_feed_to_chr_coords_bkp.pl:314: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_feed_to_chr_coords_bkp.pl:375: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_feed_to_chr_coords_bkp.pl:384: ans ==> and
data/sift-4.0.3b/web/sift-bin/gi:1: optin ==> option
data/sift-4.0.3b/web/sift-bin/SIFT_BLink_submit.pl:205: checkpoing ==> checkpoint
data/sift-4.0.3b/web/sift-bin/SIFT_BLink_submit.pl:241: correspondance ==> correspondence
data/sift-4.0.3b/web/sift-bin/SIFT_BLink_submit.pl:266: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_BLink_submit.pl:287: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_BLink_submit.pl:290: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_BLink_submit.pl:326: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_BLink_submit.pl:348: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_BLink_submit.pl:406: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_BLink_submit.pl:415: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_aligned_seqs_submitbackup.pl:155: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_aligned_seqs_submitbackup.pl:172: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_aligned_seqs_submitbackup.pl:175: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_aligned_seqs_submitbackup.pl:208: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_aligned_seqs_submitbackup.pl:227: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_aligned_seqs_submitbackup.pl:276: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_aligned_seqs_submitbackup.pl:285: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_no_binning.pl:122: Creat ==> Create
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_no_binning.pl:427: databse ==> database
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_no_binning.pl:448: checkpoing ==> checkpoint
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_no_binning.pl:662: artifically ==> artificially
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_no_binning.pl:686: correspondance ==> correspondence
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_no_binning.pl:704: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_no_binning.pl:725: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_no_binning.pl:728: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_no_binning.pl:764: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_no_binning.pl:786: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_no_binning.pl:847: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_no_binning.pl:856: ans ==> and
data/sift-4.0.3b/web/sift-bin/seq_to_subfamily_block.pl:99: ans ==> and
data/sift-4.0.3b/web/sift-bin/seq_to_subfamily_block.pl:116: ans ==> and
data/sift-4.0.3b/web/sift-bin/seq_to_subfamily_block.pl:119: ans ==> and
data/sift-4.0.3b/web/sift-bin/seq_to_subfamily_block.pl:152: ans ==> and
data/sift-4.0.3b/web/sift-bin/seq_to_subfamily_block.pl:171: ans ==> and
data/sift-4.0.3b/web/sift-bin/seq_to_subfamily_block.pl:218: ans ==> and
data/sift-4.0.3b/web/sift-bin/seq_to_subfamily_block.pl:227: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_prod.pl:51: Creat ==> Create
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_prod.pl:511: artifically ==> artificially
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_prod.pl:614: correspondance ==> correspondence
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_prod.pl:726: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_prod.pl:747: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_prod.pl:750: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_prod.pl:786: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_prod.pl:808: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_prod.pl:869: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_prod.pl:878: ans ==> and
data/sift-4.0.3b/web/sift-bin/PHAT_submission.pl:60: specificed ==> specified
data/sift-4.0.3b/web/sift-bin/PHAT_submission.pl:170: ans ==> and
data/sift-4.0.3b/web/sift-bin/PHAT_submission.pl:187: ans ==> and
data/sift-4.0.3b/web/sift-bin/PHAT_submission.pl:190: ans ==> and
data/sift-4.0.3b/web/sift-bin/PHAT_submission.pl:223: ans ==> and
data/sift-4.0.3b/web/sift-bin/PHAT_submission.pl:242: ans ==> and
data/sift-4.0.3b/web/sift-bin/PHAT_submission.pl:289: ans ==> and
data/sift-4.0.3b/web/sift-bin/PHAT_submission.pl:298: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_BLink_submit_old.pl:204: checkpoing ==> checkpoint
data/sift-4.0.3b/web/sift-bin/SIFT_BLink_submit_old.pl:240: correspondance ==> correspondence
data/sift-4.0.3b/web/sift-bin/SIFT_BLink_submit_old.pl:265: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_BLink_submit_old.pl:286: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_BLink_submit_old.pl:289: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_BLink_submit_old.pl:325: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_BLink_submit_old.pl:347: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_BLink_submit_old.pl:405: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_BLink_submit_old.pl:414: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_aligned_seqs_submit.pl:180: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_aligned_seqs_submit.pl:197: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_aligned_seqs_submit.pl:200: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_aligned_seqs_submit.pl:233: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_aligned_seqs_submit.pl:252: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_aligned_seqs_submit.pl:301: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_aligned_seqs_submit.pl:310: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_bkp.pl:52: Creat ==> Create
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_bkp.pl:576: artifically ==> artificially
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_bkp.pl:687: correspondance ==> correspondence
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_bkp.pl:899: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_bkp.pl:920: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_bkp.pl:923: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_bkp.pl:959: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_bkp.pl:981: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_bkp.pl:1042: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_bkp.pl:1051: ans ==> and
data/sift-4.0.3b/web/sift-bin/default.amino.frq:20: Ser ==> Set
data/sift-4.0.3b/web/sift-bin/SIFT_seq_submit2.pl:228: checkpoing ==> checkpoint
data/sift-4.0.3b/web/sift-bin/SIFT_seq_submit2.pl:267: correspondance ==> correspondence
data/sift-4.0.3b/web/sift-bin/SIFT_seq_submit2.pl:292: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_seq_submit2.pl:313: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_seq_submit2.pl:316: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_seq_submit2.pl:352: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_seq_submit2.pl:374: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_seq_submit2.pl:432: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_seq_submit2.pl:441: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_1_by_1_db_query.pl:121: Creat ==> Create
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_1_by_1_db_query.pl:400: checkpoing ==> checkpoint
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_1_by_1_db_query.pl:598: artifically ==> artificially
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_1_by_1_db_query.pl:622: correspondance ==> correspondence
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_1_by_1_db_query.pl:640: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_1_by_1_db_query.pl:661: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_1_by_1_db_query.pl:664: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_1_by_1_db_query.pl:700: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_1_by_1_db_query.pl:722: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_1_by_1_db_query.pl:783: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_1_by_1_db_query.pl:792: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_feed_to_chr_coords_check.pl:288: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_feed_to_chr_coords_check.pl:308: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_feed_to_chr_coords_check.pl:311: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_BLink_submit.pl.bkp:173: checkpoing ==> checkpoint
data/sift-4.0.3b/web/sift-bin/SIFT_BLink_submit.pl.bkp:209: correspondance ==> correspondence
data/sift-4.0.3b/web/sift-bin/SIFT_BLink_submit.pl.bkp:234: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_BLink_submit.pl.bkp:255: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_BLink_submit.pl.bkp:258: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_BLink_submit.pl.bkp:294: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_BLink_submit.pl.bkp:316: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_BLink_submit.pl.bkp:374: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_BLink_submit.pl.bkp:383: ans ==> and
data/sift-4.0.3b/web/sift-bin/collate_SIFT_pid_subst.pl:85: artifically ==> artificially
data/sift-4.0.3b/web/sift-bin/collate_SIFT_pid_subst.pl:105: correspondance ==> correspondence
data/sift-4.0.3b/web/sift-bin/collate_SIFT_pid_subst.pl:122: ans ==> and
data/sift-4.0.3b/web/sift-bin/collate_SIFT_pid_subst.pl:143: ans ==> and
data/sift-4.0.3b/web/sift-bin/collate_SIFT_pid_subst.pl:146: ans ==> and
data/sift-4.0.3b/web/sift-bin/collate_SIFT_pid_subst.pl:182: ans ==> and
data/sift-4.0.3b/web/sift-bin/collate_SIFT_pid_subst.pl:204: ans ==> and
data/sift-4.0.3b/web/sift-bin/collate_SIFT_pid_subst.pl:262: ans ==> and
data/sift-4.0.3b/web/sift-bin/collate_SIFT_pid_subst.pl:271: ans ==> and
data/sift-4.0.3b/web/sift-bin/detect_repeat.pl:23: handel ==> handle
data/sift-4.0.3b/web/sift-bin/detect_repeat.pl:24: handel ==> handle
data/sift-4.0.3b/web/sift-bin/detect_repeat.pl:25: handel ==> handle
data/sift-4.0.3b/web/sift-bin/detect_repeat.pl:129: teh ==> the
data/sift-4.0.3b/web/sift-bin/detect_repeat.pl:146: seqence ==> sequence
data/sift-4.0.3b/web/sift-bin/detect_repeat.pl:240: witht ==> with
data/sift-4.0.3b/web/sift-bin/Classify_SNPs.pl:573: collapsable ==> collapsible
data/sift-4.0.3b/web/sift-bin/Classify_SNPs.pl:815: collapsable ==> collapsible
data/sift-4.0.3b/web/sift-bin/SIFT_dbSNP_submit_backup.pl:112: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_dbSNP_submit_backup.pl:131: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_dbSNP_submit_backup.pl:134: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_dbSNP_submit_backup.pl:169: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_dbSNP_submit_backup.pl:190: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_dbSNP_submit_backup.pl:233: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_dbSNP_submit_backup.pl:242: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_dbSNP_submit_backup.pl:345: artifically ==> artificially
data/sift-4.0.3b/web/sift-bin/detect_repeat3.pl:23: handel ==> handle
data/sift-4.0.3b/web/sift-bin/detect_repeat3.pl:24: handel ==> handle
data/sift-4.0.3b/web/sift-bin/detect_repeat3.pl:25: handel ==> handle
data/sift-4.0.3b/web/sift-bin/detect_repeat3.pl:130: teh ==> the
data/sift-4.0.3b/web/sift-bin/detect_repeat3.pl:147: seqence ==> sequence
data/sift-4.0.3b/web/sift-bin/detect_repeat3.pl:241: witht ==> with
data/sift-4.0.3b/web/sift-bin/PHAT_submission_profile.pl:60: specificed ==> specified
data/sift-4.0.3b/web/sift-bin/PHAT_submission_profile.pl:127: ans ==> and
data/sift-4.0.3b/web/sift-bin/PHAT_submission_profile.pl:144: ans ==> and
data/sift-4.0.3b/web/sift-bin/PHAT_submission_profile.pl:147: ans ==> and
data/sift-4.0.3b/web/sift-bin/PHAT_submission_profile.pl:180: ans ==> and
data/sift-4.0.3b/web/sift-bin/PHAT_submission_profile.pl:199: ans ==> and
data/sift-4.0.3b/web/sift-bin/PHAT_submission_profile.pl:246: ans ==> and
data/sift-4.0.3b/web/sift-bin/PHAT_submission_profile.pl:255: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFTING2_modified_by_pauline.csh:77: optin ==> option
data/sift-4.0.3b/web/sift-bin/SIFT_dbSNP_submit_db.pl:141: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_dbSNP_submit_db.pl:162: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_dbSNP_submit_db.pl:165: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_dbSNP_submit_db.pl:201: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_dbSNP_submit_db.pl:223: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_dbSNP_submit_db.pl:272: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_dbSNP_submit_db.pl:281: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_dbSNP_submit_db.pl:501: artifically ==> artificially
data/sift-4.0.3b/web/sift-bin/logos.csh:4: referece ==> reference
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_030110.pl:92: Creat ==> Create
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_030110.pl:587: artifically ==> artificially
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_030110.pl:700: correspondance ==> correspondence
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_030110.pl:911: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_030110.pl:932: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_030110.pl:935: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_030110.pl:971: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_030110.pl:993: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_030110.pl:1054: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_chr_coords_submit_030110.pl:1063: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_seq_submit2.pl.bak:217: checkpoing ==> checkpoint
data/sift-4.0.3b/web/sift-bin/SIFT_seq_submit2.pl.bak:248: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_seq_submit2.pl.bak:265: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_seq_submit2.pl.bak:268: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_seq_submit2.pl.bak:301: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_seq_submit2.pl.bak:320: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_seq_submit2.pl.bak:367: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_seq_submit2.pl.bak:376: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFTING2.csh.bak:68: optin ==> option
data/sift-4.0.3b/web/sift-bin/SIFT_pid_subst_all_submit.pl:319: databse ==> database
data/sift-4.0.3b/web/sift-bin/SIFT_pid_subst_all_submit.pl:320: alined ==> aligned
data/sift-4.0.3b/web/sift-bin/SIFT_pid_subst_all_submit.pl:341: checkpoing ==> checkpoint
data/sift-4.0.3b/web/sift-bin/SIFT_pid_subst_all_submit.pl:440: artifically ==> artificially
data/sift-4.0.3b/web/sift-bin/SIFT_pid_subst_all_submit.pl:460: correspondance ==> correspondence
data/sift-4.0.3b/web/sift-bin/SIFT_pid_subst_all_submit.pl:477: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_pid_subst_all_submit.pl:498: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_pid_subst_all_submit.pl:501: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_pid_subst_all_submit.pl:537: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_pid_subst_all_submit.pl:559: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_pid_subst_all_submit.pl:617: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_pid_subst_all_submit.pl:626: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_seq_submitcopy.pl:171: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_seq_submitcopy.pl:188: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_seq_submitcopy.pl:191: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_seq_submitcopy.pl:224: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_seq_submitcopy.pl:243: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_seq_submitcopy.pl:290: ans ==> and
data/sift-4.0.3b/web/sift-bin/SIFT_seq_submitcopy.pl:299: ans ==> and
data/sift-4.0.3b/web/blocks-bin/getblock.pl:322: ans ==> and
data/sift-4.0.3b/web/blocks-bin/getblock.pl:339: ans ==> and
data/sift-4.0.3b/web/blocks-bin/getblock.pl:342: ans ==> and
data/sift-4.0.3b/web/blocks-bin/blalign.pl:67: ans ==> and
data/sift-4.0.3b/web/blocks-bin/blalign.pl:84: ans ==> and
data/sift-4.0.3b/web/blocks-bin/blalign.pl:87: ans ==> and
data/sift-4.0.3b/web/blocks-bin/diy.pl:76: ans ==> and
data/sift-4.0.3b/web/blocks-bin/diy.pl:93: ans ==> and
data/sift-4.0.3b/web/blocks-bin/diy.pl:96: ans ==> and
data/sift-4.0.3b/web/blocks-bin/oligo_melt.pl:69: ans ==> and
data/sift-4.0.3b/web/blocks-bin/oligo_melt.pl:86: ans ==> and
data/sift-4.0.3b/web/blocks-bin/oligo_melt.pl:89: ans ==> and
data/sift-4.0.3b/web/blocks-bin/htmlize-getchrom.pl:390: TRE ==> TREE
data/sift-4.0.3b/web/blocks-bin/htmlize-getchrom.pl:391: TRE ==> TREE
data/sift-4.0.3b/web/blocks-bin/htmlize-getchrom.pl:393: TRE ==> TREE
data/sift-4.0.3b/web/blocks-bin/htmlize-map.pl:69: begining ==> beginning
data/sift-4.0.3b/web/blocks-bin/treeviewer.pl:11: tre ==> tree
data/sift-4.0.3b/web/blocks-bin/treeviewer.pl:12: tre ==> tree
data/sift-4.0.3b/web/blocks-bin/treeviewer.pl:16: tre ==> tree
data/sift-4.0.3b/web/blocks-bin/treeviewer.pl:20: tre ==> tree
data/sift-4.0.3b/web/blocks-bin/treeviewer.pl:91: tre ==> tree
data/sift-4.0.3b/web/blocks-bin/treeviewer.pl:197: tre ==> tree
data/sift-4.0.3b/web/blocks-bin/treeviewer.pl:271: tre ==> tree
data/sift-4.0.3b/web/blocks-bin/treeviewer.pl:301: tre ==> tree
data/sift-4.0.3b/web/blocks-bin/treeviewer.pl:308: tre ==> tree
data/sift-4.0.3b/web/blocks-bin/cobbler.pl:121: ans ==> and
data/sift-4.0.3b/web/blocks-bin/cobbler.pl:138: ans ==> and
data/sift-4.0.3b/web/blocks-bin/cobbler.pl:141: ans ==> and
data/sift-4.0.3b/web/blocks-bin/contact.pl:73: ot ==> to, of, or
data/sift-4.0.3b/web/blocks-bin/contact.pl:162: ans ==> and
data/sift-4.0.3b/web/blocks-bin/contact.pl:179: ans ==> and
data/sift-4.0.3b/web/blocks-bin/contact.pl:182: ans ==> and
data/sift-4.0.3b/web/blocks-bin/format_blocks.pl:134: TRE ==> TREE
data/sift-4.0.3b/web/blocks-bin/format_blocks.pl:135: TRE ==> TREE
data/sift-4.0.3b/web/blocks-bin/format_blocks.pl:137: TRE ==> TREE
data/sift-4.0.3b/web/blocks-bin/rpsblast.pl:269: ans ==> and
data/sift-4.0.3b/web/blocks-bin/rpsblast.pl:288: ans ==> and
data/sift-4.0.3b/web/blocks-bin/rpsblast.pl:336: ans ==> and
data/sift-4.0.3b/web/blocks-bin/rpsblast.pl:345: ans ==> and
data/sift-4.0.3b/web/blocks-bin/addseqs.pl:82: ans ==> and
data/sift-4.0.3b/web/blocks-bin/addseqs.pl:99: ans ==> and
data/sift-4.0.3b/web/blocks-bin/addseqs.pl:102: ans ==> and
data/sift-4.0.3b/web/blocks-bin/narrow.pl:132: ans ==> and
data/sift-4.0.3b/web/blocks-bin/narrow.pl:154: ans ==> and
data/sift-4.0.3b/web/blocks-bin/narrow.pl:206: ans ==> and
data/sift-4.0.3b/web/blocks-bin/narrow.pl:213: ans ==> and
data/sift-4.0.3b/web/blocks-bin/process_blocks.pl:198: TRE ==> TREE
data/sift-4.0.3b/web/blocks-bin/process_blocks.pl:199: TRE ==> TREE
data/sift-4.0.3b/web/blocks-bin/process_blocks.pl:201: TRE ==> TREE
data/sift-4.0.3b/web/blocks-bin/process_blocks.pl:282: ans ==> and
data/sift-4.0.3b/web/blocks-bin/process_blocks.pl:299: ans ==> and
data/sift-4.0.3b/web/blocks-bin/process_blocks.pl:302: ans ==> and
data/sift-4.0.3b/web/blocks-bin/process_blocks.pl:329: ans ==> and
data/sift-4.0.3b/web/blocks-bin/process_blocks.pl:351: ans ==> and
data/sift-4.0.3b/web/blocks-bin/process_blocks.pl:403: ans ==> and
data/sift-4.0.3b/web/blocks-bin/process_blocks.pl:409: ans ==> and
data/sift-4.0.3b/web/blocks-bin/impala.pl:134: ans ==> and
data/sift-4.0.3b/web/blocks-bin/impala.pl:153: ans ==> and
data/sift-4.0.3b/web/blocks-bin/impala.pl:201: ans ==> and
data/sift-4.0.3b/web/blocks-bin/impala.pl:210: ans ==> and
data/sift-4.0.3b/web/blocks-bin/kidofwais.pl:252: te ==> the, be, we
data/sift-4.0.3b/web/blocks-bin/contest.pl:73: ot ==> to, of, or
data/sift-4.0.3b/web/blocks-bin/contest.pl:161: ans ==> and
data/sift-4.0.3b/web/blocks-bin/contest.pl:178: ans ==> and
data/sift-4.0.3b/web/blocks-bin/contest.pl:181: ans ==> and
data/sift-4.0.3b/web/blocks-bin/cyrcaLama.pl:68: realease ==> release
data/sift-4.0.3b/web/blocks-bin/bm_format.pl:119: TRE ==> TREE
data/sift-4.0.3b/web/blocks-bin/bm_format.pl:120: TRE ==> TREE
data/sift-4.0.3b/web/blocks-bin/bm_format.pl:125: TRE ==> TREE
data/sift-4.0.3b/web/blocks-bin/bm_format.pl:275: TRE ==> TREE
data/sift-4.0.3b/web/blocks-bin/bm_format.pl:276: TRE ==> TREE
data/sift-4.0.3b/web/blocks-bin/bm_format.pl:281: TRE ==> TREE
data/sift-4.0.3b/web/blocks-bin/makeblocks.pl:194: ans ==> and
data/sift-4.0.3b/web/blocks-bin/makeblocks.pl:211: ans ==> and
data/sift-4.0.3b/web/blocks-bin/makeblocks.pl:214: ans ==> and
data/sift-4.0.3b/web/blocks-bin/makeblocks.pl:245: ans ==> and
data/sift-4.0.3b/web/blocks-bin/makeblocks.pl:264: ans ==> and
data/sift-4.0.3b/web/blocks-bin/makeblocks.pl:310: ans ==> and
data/sift-4.0.3b/web/blocks-bin/makeblocks.pl:316: ans ==> and
data/sift-4.0.3b/web/blocks-bin/bm_htmlize-map.pl:4: becuase ==> because
data/sift-4.0.3b/web/blocks-bin/bm_htmlize-map.pl:61: begining ==> beginning
data/sift-4.0.3b/web/blocks-bin/codehop.pl:147: ans ==> and
data/sift-4.0.3b/web/blocks-bin/codehop.pl:164: ans ==> and
data/sift-4.0.3b/web/blocks-bin/codehop.pl:167: ans ==> and
data/sift-4.0.3b/web/blocks-bin/bm_test.pl:110: TRE ==> TREE
data/sift-4.0.3b/web/blocks-bin/bm_test.pl:111: TRE ==> TREE
data/sift-4.0.3b/web/blocks-bin/bm_test.pl:116: TRE ==> TREE
data/sift-4.0.3b/web/blocks-bin/bm_test.pl:262: TRE ==> TREE
data/sift-4.0.3b/web/blocks-bin/bm_test.pl:263: TRE ==> TREE
data/sift-4.0.3b/web/blocks-bin/bm_test.pl:268: TRE ==> TREE
data/sift-4.0.3b/blimps/docs/identity.frq:20: Ser ==> Set
data/sift-4.0.3b/blimps/docs/skiplist.doc:35: algorithims ==> algorithms
data/sift-4.0.3b/blimps/docs/skiplist.doc:90: peformance ==> performance
data/sift-4.0.3b/blimps/docs/skiplist.doc:244: dilema ==> dilemma
data/sift-4.0.3b/blimps/docs/sl-functions.doc:46: everytime ==> every time
data/sift-4.0.3b/blimps/docs/sl-functions.doc:146: usefull ==> useful
data/sift-4.0.3b/blimps/docs/sl-functions.doc:154: upto ==> up to
data/sift-4.0.3b/blimps/docs/sl-functions.doc:200: everytime ==> every time
data/sift-4.0.3b/blimps/docs/default.amino.frq:20: Ser ==> Set
data/sift-4.0.3b/blimps/docs/default.codon.frq:20: Ser ==> Set
data/sift-4.0.3b/blimps/docs/config.doc:124: additonal ==> additional
data/sift-4.0.3b/debian/patches/fix_perl_interpreter_and_lib_path:694: memeory ==> memory
data/sift-4.0.3b/debian/patches/fix_perl_interpreter_and_lib_path:1875: occurence ==> occurrence
data/sift-4.0.3b/.pc/fix_perl_interpreter_and_lib_path/bin/SIFT_exome_nssnvs.pl:242: ans ==> and
data/sift-4.0.3b/.pc/fix_perl_interpreter_and_lib_path/bin/SIFT_exome_nssnvs.pl:264: ans ==> and
data/sift-4.0.3b/.pc/fix_perl_interpreter_and_lib_path/bin/SIFT_exome_nssnvs.pl:325: ans ==> and
data/sift-4.0.3b/.pc/fix_perl_interpreter_and_lib_path/bin/SIFT_exome_nssnvs.pl:334: ans ==> and
data/sift-4.0.3b/.pc/fix_perl_interpreter_and_lib_path/bin/SIFT_exome_indels.pl:100: Creat ==> Create
data/sift-4.0.3b/.pc/fix_perl_interpreter_and_lib_path/bin/SIFT_exome_indels.pl:333: infor ==> info
data/sift-4.0.3b/.pc/fix_perl_interpreter_and_lib_path/bin/SIFT_exome_indels.pl:478: modfied ==> modified
data/sift-4.0.3b/.pc/fix_perl_interpreter_and_lib_path/bin/SIFT_exome_indels.pl:622: ans ==> and
data/sift-4.0.3b/.pc/fix_perl_interpreter_and_lib_path/bin/SIFT_exome_indels.pl:643: ans ==> and
data/sift-4.0.3b/.pc/fix_perl_interpreter_and_lib_path/bin/SIFT_exome_indels.pl:646: ans ==> and
data/sift-4.0.3b/.pc/fix_perl_interpreter_and_lib_path/bin/SIFT_exome_indels.pl:682: ans ==> and
data/sift-4.0.3b/.pc/fix_perl_interpreter_and_lib_path/bin/SIFT_exome_indels.pl:704: ans ==> and
data/sift-4.0.3b/.pc/fix_perl_interpreter_and_lib_path/bin/SIFT_exome_indels.pl:765: ans ==> and
data/sift-4.0.3b/.pc/fix_perl_interpreter_and_lib_path/bin/SIFT_exome_indels.pl:774: ans ==> and
data/sift-4.0.3b/.pc/fix_perl_interpreter_and_lib_path/bin/Classify_SNPs_Indels.pl:608: occuring ==> occurring
data/sift-4.0.3b/.pc/fix_perl_interpreter_and_lib_path/bin/Classify_SNPs_Indels.pl:702: collapsable ==> collapsible
data/sift-4.0.3b/.pc/fix_perl_interpreter_and_lib_path/bin/Classify_SNPs_Indels.pl:887: befor ==> before
data/sift-4.0.3b/.pc/fix_perl_interpreter_and_lib_path/bin/Classify_SNPs_Indels.pl:1119: collapsable ==> collapsible
data/sift-4.0.3b/.pc/fix_perl_interpreter_and_lib_path/bin/Classify_SNPs_Indels.pl:1386: alignement ==> alignment
data/sift-4.0.3b/.pc/fix_perl_interpreter_and_lib_path/bin/detect_repeat.pl:24: handel ==> handle
data/sift-4.0.3b/.pc/fix_perl_interpreter_and_lib_path/bin/detect_repeat.pl:25: handel ==> handle
data/sift-4.0.3b/.pc/fix_perl_interpreter_and_lib_path/bin/detect_repeat.pl:26: handel ==> handle
data/sift-4.0.3b/.pc/fix_perl_interpreter_and_lib_path/bin/detect_repeat.pl:129: teh ==> the
data/sift-4.0.3b/.pc/fix_perl_interpreter_and_lib_path/bin/detect_repeat.pl:146: seqence ==> sequence
data/sift-4.0.3b/.pc/fix_perl_interpreter_and_lib_path/bin/detect_repeat.pl:240: witht ==> with
data/sift-4.0.3b/.pc/fix_perl_interpreter_and_lib_path/bin/snv_db_engine.pl:73: Creat ==> Create
data/sift-4.0.3b/.pc/fix_perl_interpreter_and_lib_path/bin/snv_db_engine.pl:575: artifically ==> artificially
data/sift-4.0.3b/.pc/fix_perl_interpreter_and_lib_path/bin/snv_db_engine.pl:630: correspondance ==> correspondence
data/sift-4.0.3b/.pc/fix_perl_interpreter_and_lib_path/bin/snv_db_engine.pl:841: ans ==> and
data/sift-4.0.3b/.pc/fix_perl_interpreter_and_lib_path/bin/snv_db_engine.pl:862: ans ==> and
data/sift-4.0.3b/.pc/fix_perl_interpreter_and_lib_path/bin/snv_db_engine.pl:865: ans ==> and
data/sift-4.0.3b/.pc/fix_perl_interpreter_and_lib_path/bin/snv_db_engine.pl:901: ans ==> and
data/sift-4.0.3b/.pc/fix_perl_interpreter_and_lib_path/bin/snv_db_engine.pl:923: ans ==> and
data/sift-4.0.3b/.pc/fix_perl_interpreter_and_lib_path/bin/snv_db_engine.pl:984: ans ==> and
data/sift-4.0.3b/.pc/fix_perl_interpreter_and_lib_path/bin/snv_db_engine.pl:993: ans ==> and
data/sift-4.0.3b/.pc/fix_perl_interpreter_and_lib_path/bin/SNPClassifier/Classify_SNPs.pl:590: collapsable ==> collapsible
data/sift-4.0.3b/.pc/fix_perl_interpreter_and_lib_path/bin/SNPClassifier/Classify_SNPs.pl:832: collapsable ==> collapsible
data/sift-4.0.3b/.pc/fix_perl_interpreter_and_lib_path/src/Alignment.c:1043: ony ==> only
data/sift-4.0.3b/.pc/fix_perl_interpreter_and_lib_path/src/Alignment.c:1182: lenght ==> length
data/sift-4.0.3b/.pc/fix_perl_interpreter_and_lib_path/src/Alignment.c:1456: andthe ==> and the
data/sift-4.0.3b/.pc/fix_perl_interpreter_and_lib_path/src/Alignment.c:1621: inthe ==> in the
data/sift-4.0.3b/.pc/fix_perl_interpreter_and_lib_path/src/Alignment.c:1718: inthe ==> in the
data/sift-4.0.3b/.pc/fix_perl_interpreter_and_lib_path/src/Alignment.c:2040: statment ==> statement
data/sift-4.0.3b/.pc/fix_perl_interpreter_and_lib_path/src/choose_seqs_via_psiblastseedmedian.c:209: memeory ==> memory
data/sift-4.0.3b/.pc/fix_perl_interpreter_and_lib_path/src/consensus_to_seq.c:115: corresonding ==> corresponding
data/sift-4.0.3b/.pc/fix_perl_interpreter_and_lib_path/src/info_on_seqs.c:289: poistion ==> position
data/sift-4.0.3b/.pc/fix_perl_interpreter_and_lib_path/src/Matrix_Info.c:374: positons ==> positions, positrons
data/sift-4.0.3b/.pc/fix_perl_interpreter_and_lib_path/src/Matrix_Info.c:633: corrent ==> correct, current
data/sift-4.0.3b/.pc/fix_perl_interpreter_and_lib_path/src/Matrix_Info.c:1002: allowd ==> allowed, allow, allows
data/sift-4.0.3b/.pc/fix_perl_interpreter_and_lib_path/src/Matrix_Info.c:1003: reall ==> real, really
data/sift-4.0.3b/.pc/fix_perl_interpreter_and_lib_path/src/PN_convert.c:690: orignal ==> original
data/sift-4.0.3b/.pc/fix_perl_interpreter_and_lib_path/src/PN_convert.c:910: similiarity ==> similarity
data/sift-4.0.3b/.pc/fix_perl_interpreter_and_lib_path/src/PN_convert.c:1462: occurence ==> occurrence
data/sift-4.0.3b/.pc/fix_perl_interpreter_and_lib_path/src/Psiblast.c:143: apropriate ==> appropriate
data/sift-4.0.3b/.pc/fix_perl_interpreter_and_lib_path/src/Clumping.c:139: statment ==> statement
data/sift-4.0.3b/.pc/fix_perl_interpreter_and_lib_path/src/Clumping.c:220: taht ==> that
data/sift-4.0.3b/.pc/fix_perl_interpreter_and_lib_path/src/Clumping.c:370: statment ==> statement
data/sift-4.0.3b/.pc/fix_gcc_warnings/src/Alignment.c:1047: ony ==> only
data/sift-4.0.3b/.pc/fix_gcc_warnings/src/Alignment.c:1186: lenght ==> length
data/sift-4.0.3b/.pc/fix_gcc_warnings/src/Alignment.c:1462: andthe ==> and the
data/sift-4.0.3b/.pc/fix_gcc_warnings/src/Alignment.c:1628: inthe ==> in the
data/sift-4.0.3b/.pc/fix_gcc_warnings/src/Alignment.c:1725: inthe ==> in the
data/sift-4.0.3b/.pc/fix_gcc_warnings/src/Alignment.c:2047: statment ==> statement
data/sift-4.0.3b/.pc/fix_gcc_warnings/src/PN_convert.c:693: orignal ==> original
data/sift-4.0.3b/.pc/fix_gcc_warnings/src/PN_convert.c:913: similiarity ==> similarity
data/sift-4.0.3b/.pc/fix_gcc_warnings/src/PN_convert.c:1465: occurence ==> occurrence
data/sift-4.0.3b/.pc/fix_gcc_warnings/src/Psiblast.c:144: apropriate ==> appropriate
data/sift-4.0.3b/.pc/fix_gcc_warnings/src/Matrix_Info.c:374: positons ==> positions, positrons
data/sift-4.0.3b/.pc/fix_gcc_warnings/src/Matrix_Info.c:633: corrent ==> correct, current
data/sift-4.0.3b/.pc/fix_gcc_warnings/src/Matrix_Info.c:1002: allowd ==> allowed, allow, allows
data/sift-4.0.3b/.pc/fix_gcc_warnings/src/Matrix_Info.c:1003: reall ==> real, really