data/snap-aligner-1.0.0+dfsg/SNAPLib/AffineGap.h:18: occurance ==> occurrence
data/snap-aligner-1.0.0+dfsg/SNAPLib/AffineGapVectorized.h:22: occurance ==> occurrence
data/snap-aligner-1.0.0+dfsg/SNAPLib/AlignerContext.cpp:316: forgoten ==> forgotten
data/snap-aligner-1.0.0+dfsg/SNAPLib/AlignerContext.h:69: overrideable ==> overridable
data/snap-aligner-1.0.0+dfsg/SNAPLib/AlignmentAdjuster.cpp:122: incase ==> in case
data/snap-aligner-1.0.0+dfsg/SNAPLib/AlignmentAdjuster.cpp:163: processess ==> processes
data/snap-aligner-1.0.0+dfsg/SNAPLib/AlignmentAdjuster.cpp:176: incase ==> in case
data/snap-aligner-1.0.0+dfsg/SNAPLib/Bam.cpp:148: conatain ==> contain
data/snap-aligner-1.0.0+dfsg/SNAPLib/BaseAligner.cpp:187: allocte ==> allocate
data/snap-aligner-1.0.0+dfsg/SNAPLib/BaseAligner.cpp:189: allocte ==> allocate
data/snap-aligner-1.0.0+dfsg/SNAPLib/BaseAligner.h:85: Retun ==> Return
data/snap-aligner-1.0.0+dfsg/SNAPLib/BaseAligner.h:395: otheriwse ==> otherwise
data/snap-aligner-1.0.0+dfsg/SNAPLib/Error.cpp:13: Feburary ==> February
data/snap-aligner-1.0.0+dfsg/SNAPLib/Error.h:13: Feburary ==> February
data/snap-aligner-1.0.0+dfsg/SNAPLib/FixedSizeMap.h:144: overlow ==> overflow
data/snap-aligner-1.0.0+dfsg/SNAPLib/FixedSizeMap.h:163: overlow ==> overflow
data/snap-aligner-1.0.0+dfsg/SNAPLib/FixedSizeSet.h:85: non-existant ==> non-existent
data/snap-aligner-1.0.0+dfsg/SNAPLib/GenericFile_HDFS.cpp:337: implementaiton ==> implementation
data/snap-aligner-1.0.0+dfsg/SNAPLib/GenomeIndex.h:40: arbirtary ==> arbitrary
data/snap-aligner-1.0.0+dfsg/SNAPLib/IntersectingPairedEndAligner.cpp:888: pase ==> pass, pace, parse
data/snap-aligner-1.0.0+dfsg/SNAPLib/IntersectingPairedEndAligner.h:221: exhaused ==> exhausted
data/snap-aligner-1.0.0+dfsg/SNAPLib/IntersectingPairedEndAligner.h:479: stuct ==> struct
data/snap-aligner-1.0.0+dfsg/SNAPLib/IntersectingPairedEndAligner.h:591: otheriwse ==> otherwise
data/snap-aligner-1.0.0+dfsg/SNAPLib/LandauVishkin.h:16: occurance ==> occurrence
data/snap-aligner-1.0.0+dfsg/SNAPLib/LandauVishkin.h:81: substition ==> substitution
data/snap-aligner-1.0.0+dfsg/SNAPLib/LandauVishkin.h:163: Becuase ==> Because
data/snap-aligner-1.0.0+dfsg/SNAPLib/LandauVishkin.h:340: requre ==> require
data/snap-aligner-1.0.0+dfsg/SNAPLib/ProbabilityDistance.h:10: substitions ==> substitutions
data/snap-aligner-1.0.0+dfsg/SNAPLib/Read.h:737: doens't ==> doesn't
data/snap-aligner-1.0.0+dfsg/SNAPLib/SAM.cpp:788: becuase ==> because
data/snap-aligner-1.0.0+dfsg/SNAPLib/SAM.cpp:2454: incase ==> in case
data/snap-aligner-1.0.0+dfsg/SNAPLib/SAM.cpp:2476: processess ==> processes
data/snap-aligner-1.0.0+dfsg/SNAPLib/SAM.cpp:2489: incase ==> in case
data/snap-aligner-1.0.0+dfsg/SNAPLib/SAM.cpp:2572: incase ==> in case
data/snap-aligner-1.0.0+dfsg/SNAPLib/SAM.cpp:2595: processess ==> processes
data/snap-aligner-1.0.0+dfsg/SNAPLib/SAM.cpp:2608: incase ==> in case
data/snap-aligner-1.0.0+dfsg/SNAPLib/SortedDataWriter.cpp:1014: doens't ==> doesn't
data/snap-aligner-1.0.0+dfsg/SNAPLib/SortedDataWriter.cpp:1231: Otheriwse ==> Otherwise
data/snap-aligner-1.0.0+dfsg/SNAPLib/Compat.cpp:11: readibility ==> readability
data/snap-aligner-1.0.0+dfsg/SNAPLib/AlignerOptions.cpp:205: evalutation ==> evaluation
data/snap-aligner-1.0.0+dfsg/SNAPLib/GenomeIndex.cpp:730: desparately ==> desperately
data/snap-aligner-1.0.0+dfsg/SNAPLib/GenomeIndex.cpp:766: releive ==> relieve
data/snap-aligner-1.0.0+dfsg/SNAPLib/Compat.h:11: readibility ==> readability
data/snap-aligner-1.0.0+dfsg/SNAPLib/Compat.h:428: alls ==> all, falls
data/snap-aligner-1.0.0+dfsg/SNAPLib/Compat.h:447: ans ==> and
data/snap-aligner-1.0.0+dfsg/SNAPLib/Compat.h:447: ans ==> and
data/snap-aligner-1.0.0+dfsg/SNAPLib/Compat.h:448: ans ==> and
data/snap-aligner-1.0.0+dfsg/SNAPLib/Compat.h:448: ans ==> and
data/snap-aligner-1.0.0+dfsg/SNAPLib/Compat.h:451: ans ==> and
data/snap-aligner-1.0.0+dfsg/SNAPLib/Compat.h:451: ans ==> and
data/snap-aligner-1.0.0+dfsg/SNAPLib/Compat.h:452: ans ==> and
data/snap-aligner-1.0.0+dfsg/SNAPLib/Compat.h:452: ans ==> and
data/snap-aligner-1.0.0+dfsg/import/pdclibhdfs/inc/exception.h:54: Theses ==> These, thesis
data/snap-aligner-1.0.0+dfsg/import/pdclibhdfs/inc/hdfs.h:204: equivelant ==> equivalent
data/snap-aligner-1.0.0+dfsg/import/pdclibhdfs/inc/hdfs.h:424: exsits ==> exists, exist
data/snap-aligner-1.0.0+dfsg/import/pdclibhdfs/inc/native_mini_dfs.h:47: inout ==> input, in out
data/snap-aligner-1.0.0+dfsg/import/pdclibhdfs/src/hdfs.c:666: FileSytem ==> filesystem
data/snap-aligner-1.0.0+dfsg/import/pdclibhdfs/src/hdfs.c:678: FileSytem ==> filesystem
data/snap-aligner-1.0.0+dfsg/import/pdclibhdfs/src/jni_helper.c:432: parms ==> params, prams
data/snap-aligner-1.0.0+dfsg/import/pdclibhdfs/src/jni_helper.c:476: Probaly ==> Probably
data/snap-aligner-1.0.0+dfsg/import/pdclibhdfs/src/jni_helper.c:537: Invokation ==> Invocation
data/snap-aligner-1.0.0+dfsg/import/pdclibhdfs/src/jni_helper.c:600: Invokation ==> Invocation
data/snap-aligner-1.0.0+dfsg/import/pdclibhdfs/src/jni_helper.c:775: environemnt ==> environment
data/snap-aligner-1.0.0+dfsg/import/pdclibhdfs/src/jni_helper.c:1038: comaptible ==> compatible
data/snap-aligner-1.0.0+dfsg/import/pdclibhdfs/src/jni_helper.c:1083: failt ==> fail, failed
data/snap-aligner-1.0.0+dfsg/tests/filetest.py:1: filetest ==> file test
data/snap-aligner-1.0.0+dfsg/debian/patches/spelling:2: grammer ==> grammar
data/snap-aligner-1.0.0+dfsg/debian/patches/spelling:11: defualt ==> default
data/snap-aligner-1.0.0+dfsg/debian/patches/spelling:22: thats ==> that's
data/snap-aligner-1.0.0+dfsg/debian/patches/spelling:25: overriden ==> overridden
data/snap-aligner-1.0.0+dfsg/.pc/non-x86-and-kfreebsd/SNAPLib/Compat.cpp:11: readibility ==> readability
data/snap-aligner-1.0.0+dfsg/.pc/non-x86-and-kfreebsd/SNAPLib/Compat.h:11: readibility ==> readability
data/snap-aligner-1.0.0+dfsg/.pc/non-x86-and-kfreebsd/SNAPLib/Compat.h:422: alls ==> all, falls
data/snap-aligner-1.0.0+dfsg/.pc/non-x86-and-kfreebsd/SNAPLib/Compat.h:441: ans ==> and
data/snap-aligner-1.0.0+dfsg/.pc/non-x86-and-kfreebsd/SNAPLib/Compat.h:441: ans ==> and
data/snap-aligner-1.0.0+dfsg/.pc/non-x86-and-kfreebsd/SNAPLib/Compat.h:442: ans ==> and
data/snap-aligner-1.0.0+dfsg/.pc/non-x86-and-kfreebsd/SNAPLib/Compat.h:442: ans ==> and
data/snap-aligner-1.0.0+dfsg/.pc/non-x86-and-kfreebsd/SNAPLib/Compat.h:445: ans ==> and
data/snap-aligner-1.0.0+dfsg/.pc/non-x86-and-kfreebsd/SNAPLib/Compat.h:445: ans ==> and
data/snap-aligner-1.0.0+dfsg/.pc/non-x86-and-kfreebsd/SNAPLib/Compat.h:446: ans ==> and
data/snap-aligner-1.0.0+dfsg/.pc/non-x86-and-kfreebsd/SNAPLib/Compat.h:446: ans ==> and
data/snap-aligner-1.0.0+dfsg/.pc/spelling/SNAPLib/AlignerOptions.cpp:173: defualt ==> default
data/snap-aligner-1.0.0+dfsg/.pc/spelling/SNAPLib/AlignerOptions.cpp:205: evalutation ==> evaluation
data/snap-aligner-1.0.0+dfsg/.pc/spelling/SNAPLib/GenomeIndex.cpp:86: thats ==> that's
data/snap-aligner-1.0.0+dfsg/.pc/spelling/SNAPLib/GenomeIndex.cpp:88: overriden ==> overridden
data/snap-aligner-1.0.0+dfsg/.pc/spelling/SNAPLib/GenomeIndex.cpp:730: desparately ==> desperately
data/snap-aligner-1.0.0+dfsg/.pc/spelling/SNAPLib/GenomeIndex.cpp:766: releive ==> relieve
data/snap-aligner-1.0.0+dfsg/.pc/simde/SNAPLib/Compat.h:11: readibility ==> readability
data/snap-aligner-1.0.0+dfsg/.pc/simde/SNAPLib/Compat.h:422: alls ==> all, falls
data/snap-aligner-1.0.0+dfsg/.pc/simde/SNAPLib/Compat.h:441: ans ==> and
data/snap-aligner-1.0.0+dfsg/.pc/simde/SNAPLib/Compat.h:441: ans ==> and
data/snap-aligner-1.0.0+dfsg/.pc/simde/SNAPLib/Compat.h:442: ans ==> and
data/snap-aligner-1.0.0+dfsg/.pc/simde/SNAPLib/Compat.h:442: ans ==> and
data/snap-aligner-1.0.0+dfsg/.pc/simde/SNAPLib/Compat.h:445: ans ==> and
data/snap-aligner-1.0.0+dfsg/.pc/simde/SNAPLib/Compat.h:445: ans ==> and
data/snap-aligner-1.0.0+dfsg/.pc/simde/SNAPLib/Compat.h:446: ans ==> and
data/snap-aligner-1.0.0+dfsg/.pc/simde/SNAPLib/Compat.h:446: ans ==> and