data/bio-tradis-1.4.5+dfsg2/README: ASCII text data/bio-tradis-1.4.5+dfsg2/AUTHORS: ASCII text data/bio-tradis-1.4.5+dfsg2/LICENSE: ASCII text data/bio-tradis-1.4.5+dfsg2/dist.ini: ASCII text data/bio-tradis-1.4.5+dfsg2/META.yml: ASCII text data/bio-tradis-1.4.5+dfsg2/MANIFEST: ASCII text data/bio-tradis-1.4.5+dfsg2/README.md: ASCII text, with very long lines data/bio-tradis-1.4.5+dfsg2/META.json: JSON data data/bio-tradis-1.4.5+dfsg2/Dockerfile: ASCII text, with very long lines data/bio-tradis-1.4.5+dfsg2/source_path: ASCII text data/bio-tradis-1.4.5+dfsg2/_config.yml: ASCII text, with no line terminators data/bio-tradis-1.4.5+dfsg2/Makefile.PL: ASCII text data/bio-tradis-1.4.5+dfsg2/CHANGELOG.md: ASCII text data/bio-tradis-1.4.5+dfsg2/bcinstall.log: ASCII text data/bio-tradis-1.4.5+dfsg2/bin/tradis_plot: Perl script text executable data/bio-tradis-1.4.5+dfsg2/bin/add_tradis_tags: Perl script text executable data/bio-tradis-1.4.5+dfsg2/bin/bacteria_tradis: Perl script text executable data/bio-tradis-1.4.5+dfsg2/bin/check_tradis_tags: Perl script text executable data/bio-tradis-1.4.5+dfsg2/bin/filter_tradis_tags: Perl script text executable data/bio-tradis-1.4.5+dfsg2/bin/remove_tradis_tags: Perl script text executable data/bio-tradis-1.4.5+dfsg2/bin/tradis_merge_plots: Perl script text executable data/bio-tradis-1.4.5+dfsg2/bin/tradis_comparison.R: a /usr/bin/env Rscript script, ASCII text executable data/bio-tradis-1.4.5+dfsg2/bin/combine_tradis_plots: Perl script text executable data/bio-tradis-1.4.5+dfsg2/bin/tradis_essentiality.R: Pascal source, ASCII text, with very long lines data/bio-tradis-1.4.5+dfsg2/bin/tradis_gene_insert_sites: Perl script text executable data/bio-tradis-1.4.5+dfsg2/software_license: ASCII text data/bio-tradis-1.4.5+dfsg2/lib/Bio/Tradis.pm: Perl5 module source, ASCII text data/bio-tradis-1.4.5+dfsg2/lib/Bio/Tradis/Map.pm: Perl5 module source, ASCII text data/bio-tradis-1.4.5+dfsg2/lib/Bio/Tradis/RunTradis.pm: Perl5 module source, ASCII 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data/bio-tradis-1.4.5+dfsg2/lib/Bio/Tradis/Analysis/InsertSite.pm: Perl5 module source, ASCII text data/bio-tradis-1.4.5+dfsg2/lib/Bio/Tradis/Samtools.pm: Perl5 module source, ASCII text data/bio-tradis-1.4.5+dfsg2/t/Bio/Tradis/Map.t: Perl script text executable data/bio-tradis-1.4.5+dfsg2/t/Bio/Tradis/RemoveTags.t: Perl script text executable data/bio-tradis-1.4.5+dfsg2/t/Bio/Tradis/DetectTags.t: Perl script text executable data/bio-tradis-1.4.5+dfsg2/t/Bio/Tradis/TradisPlot.t: Perl script text executable data/bio-tradis-1.4.5+dfsg2/t/Bio/Tradis/FilterTags.t: Perl script text executable data/bio-tradis-1.4.5+dfsg2/t/Bio/Tradis/Parser/Bam.t: Perl script text executable data/bio-tradis-1.4.5+dfsg2/t/Bio/Tradis/Parser/Fastq.t: Perl script text executable data/bio-tradis-1.4.5+dfsg2/t/Bio/Tradis/Parser/Cigar.t: Perl script text executable data/bio-tradis-1.4.5+dfsg2/t/Bio/Tradis/CombinePlots.t: Perl script text executable data/bio-tradis-1.4.5+dfsg2/t/Bio/Tradis/AddTagsToSeq.t: Perl 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data/bio-tradis-1.4.5+dfsg2/t/data/TradisPlot/sample.fastq: ASCII text data/bio-tradis-1.4.5+dfsg2/t/data/TradisPlot/test.mapped.bam: Blocked GNU Zip Format (BGZF; gzip compatible), block length 171 data/bio-tradis-1.4.5+dfsg2/t/data/TradisPlot/expected.plot.gz: gzip compressed data, last modified: Fri Sep 4 15:08:43 2015, from Unix, original size modulo 2^32 39360 data/bio-tradis-1.4.5+dfsg2/t/data/CombinePlots/test2.plot: ASCII text data/bio-tradis-1.4.5+dfsg2/t/data/CombinePlots/test3.plot: ASCII text data/bio-tradis-1.4.5+dfsg2/t/data/CombinePlots/test4.plot: ASCII text data/bio-tradis-1.4.5+dfsg2/t/data/CombinePlots/test1.plot: ASCII text data/bio-tradis-1.4.5+dfsg2/t/data/CombinePlots/comb_sample.txt: ASCII text data/bio-tradis-1.4.5+dfsg2/t/data/CombinePlots/zip_comb_list.txt: ASCII text data/bio-tradis-1.4.5+dfsg2/t/data/CombinePlots/zip_comb_exp.plot: ASCII text data/bio-tradis-1.4.5+dfsg2/t/data/CombinePlots/zip_comb_exp.stats: ASCII text 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data/bio-tradis-1.4.5+dfsg2/recipes/Transposon10/Reagents/MaintenanceWash.xml: XML 1.0 document, ASCII text, with CRLF line terminators data/bio-tradis-1.4.5+dfsg2/recipes/Transposon10/Protocol/1Read1Index.xml: XML 1.0 document, ASCII text, with CRLF line terminators data/bio-tradis-1.4.5+dfsg2/recipes/Transposon10/Protocol/2Read1Index.xml: XML 1.0 document, ASCII text, with CRLF line terminators data/bio-tradis-1.4.5+dfsg2/recipes/Transposon10/Protocol/2Read2Index.xml: XML 1.0 document, ASCII text, with CRLF line terminators data/bio-tradis-1.4.5+dfsg2/recipes/Transposon10/Protocol/1Read2Index.xml: XML 1.0 document, ASCII text, with CRLF line terminators data/bio-tradis-1.4.5+dfsg2/recipes/Tradis_SR_RR_12dark_42r1_rehyb12_index8.xml: XML 1.0 document, ASCII text, with CRLF line terminators data/bio-tradis-1.4.5+dfsg2/debian/NEWS: ASCII text data/bio-tradis-1.4.5+dfsg2/debian/README.Debian: ASCII text data/bio-tradis-1.4.5+dfsg2/debian/changelog: ASCII text data/bio-tradis-1.4.5+dfsg2/debian/control: ASCII text data/bio-tradis-1.4.5+dfsg2/debian/copyright: ASCII text data/bio-tradis-1.4.5+dfsg2/debian/createmanpages: POSIX shell script, ASCII text executable data/bio-tradis-1.4.5+dfsg2/debian/docs: ASCII text data/bio-tradis-1.4.5+dfsg2/debian/install: ASCII text data/bio-tradis-1.4.5+dfsg2/debian/manpages: ASCII text data/bio-tradis-1.4.5+dfsg2/debian/mans/tradis_comparison.1: troff or preprocessor input, ASCII text data/bio-tradis-1.4.5+dfsg2/debian/mans/tradis_essentiality.1: troff or preprocessor input, ASCII text data/bio-tradis-1.4.5+dfsg2/debian/mans/tradis_merge_plots.1: troff or preprocessor input, ASCII text data/bio-tradis-1.4.5+dfsg2/debian/patches/samtools1.10: unified diff output, ASCII text data/bio-tradis-1.4.5+dfsg2/debian/patches/series: ASCII text data/bio-tradis-1.4.5+dfsg2/debian/rules: a /usr/bin/make -f script, ASCII text executable data/bio-tradis-1.4.5+dfsg2/debian/source/format: ASCII text data/bio-tradis-1.4.5+dfsg2/debian/tests/pkg-perl/smoke-skip: ASCII text data/bio-tradis-1.4.5+dfsg2/debian/upstream/metadata: ASCII text data/bio-tradis-1.4.5+dfsg2/debian/watch: ASCII text data/bio-tradis-1.4.5+dfsg2/.pc/.version: ASCII text data/bio-tradis-1.4.5+dfsg2/.pc/.quilt_patches: ASCII text data/bio-tradis-1.4.5+dfsg2/.pc/.quilt_series: ASCII text data/bio-tradis-1.4.5+dfsg2/.pc/applied-patches: ASCII text data/bio-tradis-1.4.5+dfsg2/.pc/samtools1.10/lib/Bio/Tradis/Samtools.pm: Perl5 module source, ASCII text