data/bioperl-1.7.7/AUTHORS: Perl POD document, UTF-8 Unicode text data/bioperl-1.7.7/Changes: UTF-8 Unicode text data/bioperl-1.7.7/LICENSE: ASCII text data/bioperl-1.7.7/dist.ini: ASCII text data/bioperl-1.7.7/META.yml: ASCII text data/bioperl-1.7.7/MANIFEST: ASCII text data/bioperl-1.7.7/README.md: ASCII text data/bioperl-1.7.7/META.json: JSON data data/bioperl-1.7.7/HACKING.md: ASCII text data/bioperl-1.7.7/bin/bp_nrdb: Perl script text executable data/bioperl-1.7.7/bin/bp_index: Perl script text executable data/bioperl-1.7.7/bin/bp_fetch: Perl script text executable data/bioperl-1.7.7/bin/bp_aacomp: Perl script text executable data/bioperl-1.7.7/bin/bp_seqcut: Perl script text executable data/bioperl-1.7.7/bin/bp_seqret: Perl script text executable data/bioperl-1.7.7/bin/bp_gccalc: Perl script text executable data/bioperl-1.7.7/bin/bp_mutate: Perl script text executable data/bioperl-1.7.7/bin/bp_dbsplit: Perl script text executable data/bioperl-1.7.7/bin/bp_seqpart: Perl script text executable data/bioperl-1.7.7/bin/bp_mrtrans: Perl script text executable data/bioperl-1.7.7/bin/bp_tree2pag: Perl script text executable data/bioperl-1.7.7/bin/bp_nexus2nh: Perl script text executable data/bioperl-1.7.7/bin/bp_split_seq: Perl script text executable data/bioperl-1.7.7/bin/bp_sreformat: Perl script text executable data/bioperl-1.7.7/bin/bp_biogetseq: Perl script text executable data/bioperl-1.7.7/bin/bp_search2gff: Perl script text executable data/bioperl-1.7.7/bin/bp_seqconvert: Perl script text executable data/bioperl-1.7.7/bin/bp_seq_length: Perl script text executable data/bioperl-1.7.7/bin/bp_seqretsplit: Perl script text executable data/bioperl-1.7.7/bin/bp_oligo_count: Perl script text executable data/bioperl-1.7.7/bin/bp_process_sgd: Perl script text executable data/bioperl-1.7.7/bin/bp_search2table: Perl script text executable data/bioperl-1.7.7/bin/bp_genbank2gff3: Perl script text executable data/bioperl-1.7.7/bin/bp_search2tribe: Perl script text executable data/bioperl-1.7.7/bin/bp_taxonomy2tree: Perl script text executable data/bioperl-1.7.7/bin/bp_unflatten_seq: Perl script text executable data/bioperl-1.7.7/bin/bp_taxid4species: Perl script text executable data/bioperl-1.7.7/bin/bp_translate_seq: Perl script text executable data/bioperl-1.7.7/bin/bp_filter_search: Perl script text executable data/bioperl-1.7.7/bin/bp_bioflat_index: Perl script text executable data/bioperl-1.7.7/bin/bp_mask_by_search: Perl script text executable data/bioperl-1.7.7/bin/bp_revtrans-motif: Perl script text executable data/bioperl-1.7.7/bin/bp_process_gadfly: Perl script text executable data/bioperl-1.7.7/bin/bp_fastam9_to_table: Perl script text executable data/bioperl-1.7.7/bin/bp_search2alnblocks: Perl script text executable data/bioperl-1.7.7/bin/bp_make_mrna_protein: Perl script text executable data/bioperl-1.7.7/bin/bp_find-blast-matches: Perl script text executable data/bioperl-1.7.7/bin/bp_extract_feature_seq: Perl script text executable data/bioperl-1.7.7/bin/bp_local_taxonomydb_query: Perl script text executable data/bioperl-1.7.7/t/Species.t: awk or perl script, ASCII text data/bioperl-1.7.7/t/Seq/Seq.t: awk or perl script, ASCII text data/bioperl-1.7.7/t/Seq/DBLink.t: awk or perl script, ASCII text data/bioperl-1.7.7/t/Seq/MetaSeq.t: awk or perl script, ASCII text data/bioperl-1.7.7/t/Seq/Quality.t: awk or perl script, ASCII text data/bioperl-1.7.7/t/Seq/PrimedSeq.t: awk or perl script, ASCII text data/bioperl-1.7.7/t/Seq/LargePSeq.t: awk or perl script, ASCII text data/bioperl-1.7.7/t/Seq/EncodedSeq.t: awk or perl script, ASCII text data/bioperl-1.7.7/t/Seq/PrimarySeq.t: awk or perl script, ASCII text, with very long lines data/bioperl-1.7.7/t/Seq/PrimaryQual.t: awk or perl script, ASCII text data/bioperl-1.7.7/t/Seq/LocatableSeq.t: awk or perl script, ASCII text data/bioperl-1.7.7/t/Seq/SimulatedRead.t: awk or perl script, ASCII text data/bioperl-1.7.7/t/Seq/LargeLocatableSeq.t: awk or perl script, ASCII text data/bioperl-1.7.7/t/Root/IO.t: awk or perl script, ASCII text data/bioperl-1.7.7/t/Root/RootI.t: awk or perl script, ASCII text data/bioperl-1.7.7/t/Root/RootIO.t: awk or perl script, ASCII text data/bioperl-1.7.7/t/Root/HTTPget.t: awk or perl script, ASCII text data/bioperl-1.7.7/t/Root/Storable.t: awk or perl script, ASCII text data/bioperl-1.7.7/t/Root/Utilities.t: awk or perl script, ASCII text data/bioperl-1.7.7/t/Root/Exception.t: awk or perl script, ASCII text data/bioperl-1.7.7/t/data/MmCT: ASCII text data/bioperl-1.7.7/t/data/PAM250: ASCII text data/bioperl-1.7.7/t/data/P33897: ASCII text data/bioperl-1.7.7/t/data/so.obo: ASCII text, with very long lines data/bioperl-1.7.7/t/data/test.nh: ASCII text, with no line terminators data/bioperl-1.7.7/t/data/phi.out: ASCII text, with CRLF, LF line terminators data/bioperl-1.7.7/t/data/crab.nj: ASCII text data/bioperl-1.7.7/t/data/dna2.fa: ASCII text data/bioperl-1.7.7/t/data/tmp.fst: ASCII text data/bioperl-1.7.7/t/data/seg.out: ASCII text data/bioperl-1.7.7/t/data/seqs.fas: ASCII text data/bioperl-1.7.7/t/data/mast.dat: ASCII text data/bioperl-1.7.7/t/data/test.gcg: ASCII text data/bioperl-1.7.7/t/data/in.fasta: ASCII text data/bioperl-1.7.7/t/data/test.ace: ASCII text data/bioperl-1.7.7/t/data/test.raw: ASCII text, with very long lines data/bioperl-1.7.7/t/data/test.nhx: ASCII text, with very long lines, with no line terminators data/bioperl-1.7.7/t/data/sim4.rev: ASCII text data/bioperl-1.7.7/t/data/amino.fa: ASCII text data/bioperl-1.7.7/t/data/meme.dat: ASCII text, with very long lines data/bioperl-1.7.7/t/data/lucy.seq: ASCII text data/bioperl-1.7.7/t/data/roa1.dat: ASCII text data/bioperl-1.7.7/t/data/test.tab: ASCII text, with very long lines data/bioperl-1.7.7/t/data/test.phd: ASCII text data/bioperl-1.7.7/t/data/test.tsv: ASCII text, with very long lines data/bioperl-1.7.7/t/data/PX1CG.gb: ASCII text data/bioperl-1.7.7/t/data/test.txt: ASCII text data/bioperl-1.7.7/t/data/BLOSUM50: ASCII text 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data/bioperl-1.7.7/t/data/lucy.qual: ASCII text data/bioperl-1.7.7/t/data/test2.raw: ASCII text data/bioperl-1.7.7/t/data/M12730.gb: ASCII text data/bioperl-1.7.7/t/data/dbfa/4.fa: ASCII text data/bioperl-1.7.7/t/data/dbfa/5.fa: ASCII text data/bioperl-1.7.7/t/data/dbfa/1.fa: ASCII text data/bioperl-1.7.7/t/data/dbfa/6.fa: ASCII text data/bioperl-1.7.7/t/data/dbfa/2.fa: ASCII text data/bioperl-1.7.7/t/data/dbfa/3.fa: ASCII text data/bioperl-1.7.7/t/data/dbfa/7.fa: ASCII text data/bioperl-1.7.7/t/data/dbfa/mixed_alphabet.fasta: ASCII text data/bioperl-1.7.7/t/data/cysprot.fa: ASCII text data/bioperl-1.7.7/t/data/humts1.pal: ASCII text data/bioperl-1.7.7/t/data/seqxml.xml: XML 1.0 document, ASCII text data/bioperl-1.7.7/t/data/multi_1.fa: ASCII text data/bioperl-1.7.7/t/data/rel9.swiss: ASCII text data/bioperl-1.7.7/t/data/traits.tab: ASCII text data/bioperl-1.7.7/t/data/roa1.swiss: ASCII text data/bioperl-1.7.7/t/data/test.fastq: ASCII text data/bioperl-1.7.7/t/data/testaln.po: ASCII text data/bioperl-1.7.7/t/data/test.swiss: ASCII text data/bioperl-1.7.7/t/data/phipsi.out: ASCII text, with CRLF, LF line terminators data/bioperl-1.7.7/t/data/D10483.gbk: ASCII text data/bioperl-1.7.7/t/data/puzzle.tre: ASCII text data/bioperl-1.7.7/t/data/test-1.tab: ASCII text data/bioperl-1.7.7/t/data/no_FH.embl: ASCII text data/bioperl-1.7.7/t/data/roa1.gbxml: XML 1.0 document, ASCII text, with very long lines data/bioperl-1.7.7/t/data/bl2seq.out: ASCII text data/bioperl-1.7.7/t/data/bug2982.gb: ASCII text data/bioperl-1.7.7/t/data/spaces.nex: ASCII text data/bioperl-1.7.7/t/data/prints.out: ASCII text data/bioperl-1.7.7/t/data/multi_2.fa: ASCII text data/bioperl-1.7.7/t/data/D12555.gbk: ASCII text data/bioperl-1.7.7/t/data/bug2901.fa: ASCII text data/bioperl-1.7.7/t/data/test: cannot open `data/bioperl-1.7.7/t/data/test' (No such file or directory) 2.txt: cannot open `2.txt' (No such file or directory) data/bioperl-1.7.7/t/data/test.fasta: ASCII text data/bioperl-1.7.7/t/data/calm.swiss: ASCII text data/bioperl-1.7.7/t/data/cds-266.fas: ASCII text data/bioperl-1.7.7/t/data/bug2120.phd: ASCII text data/bioperl-1.7.7/t/data/ay149291.gb: ASCII text data/bioperl-1.7.7/t/data/example.vcf: Variant Call Format (VCF) version 4.0, ASCII text data/bioperl-1.7.7/t/data/AF165282.gb: ASCII text data/bioperl-1.7.7/t/data/bug2862.pmr: Apache Hadoop Sequence file version 85 data/bioperl-1.7.7/t/data/AHCYL1.kegg: ASCII text data/bioperl-1.7.7/t/data/BAB68554.gb: ASCII text data/bioperl-1.7.7/t/data/cysprot.msf: ASCII text data/bioperl-1.7.7/t/data/ay007676.gb: ASCII text data/bioperl-1.7.7/t/data/atp1.matrix: ASCII text data/bioperl-1.7.7/t/data/ay116458.gb: ASCII text data/bioperl-1.7.7/t/data/pep-266.aln: ASCII text data/bioperl-1.7.7/t/data/cysprot1.fa: ASCII text data/bioperl-1.7.7/t/data/testaln.psi: ASCII text data/bioperl-1.7.7/t/data/targetp.out: ASCII text data/bioperl-1.7.7/t/data/multifa.seq: ASCII text data/bioperl-1.7.7/t/data/testaln.arp: ASCII text, with very long lines data/bioperl-1.7.7/t/data/bug2453.maf: ASCII text data/bioperl-1.7.7/t/data/AAC12660.fa: ASCII text data/bioperl-1.7.7/t/data/crab.dat.cn: ASCII text data/bioperl-1.7.7/t/data/fgenesh.out: ASCII text data/bioperl-1.7.7/t/data/lucy.stderr: ASCII text data/bioperl-1.7.7/t/data/testaln.msf: ASCII text data/bioperl-1.7.7/t/data/tblastn.out: ASCII text data/bioperl-1.7.7/t/data/AF305198.gb: ASCII text data/bioperl-1.7.7/t/data/dq519393.gb: ASCII text data/bioperl-1.7.7/t/data/badfasta.fa: ASCII text data/bioperl-1.7.7/t/data/AB077698.gb: ASCII text data/bioperl-1.7.7/t/data/DQ018368.gb: ASCII text data/bioperl-1.7.7/t/data/roa1_v2.dat: ASCII text data/bioperl-1.7.7/t/data/alleles.fas: ASCII text data/bioperl-1.7.7/t/data/gmap_f9.txt: ASCII text data/bioperl-1.7.7/t/data/hmmpfam.out: ASCII text data/bioperl-1.7.7/t/data/MSGEFTUA.gb: ASCII text data/bioperl-1.7.7/t/data/AY763288.gb: ASCII text 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data/bioperl-1.7.7/lib/Bio/SeqIO/gcg.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/SeqIO/tab.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/SeqIO/embl.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/SeqIO/kegg.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/SeqIO/game.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/SeqIO/qual.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/SeqIO/tigr.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/SeqIO/bsml.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/SeqIO/gbxml.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/SeqIO/fastq.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/SeqIO/msout.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/SeqIO/table.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/SeqIO/fasta.pm: Perl5 module source, ASCII text 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ASCII text data/bioperl-1.7.7/lib/Bio/SeqIO/embldriver.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/SeqIO/largefasta.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/SeqIO/swissdriver.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/SeqIO/game/gameSubs.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/SeqIO/game/seqHandler.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/SeqIO/game/gameWriter.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/SeqIO/game/gameHandler.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/SeqIO/game/featHandler.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/SeqIO/tinyseq/tinyseqHandler.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/SeqIO/Handler/GenericRichSeqHandler.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/SeqIO/swiss.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/Matrix/IO.pm: Perl5 module 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data/bioperl-1.7.7/lib/Bio/Matrix/PSM/ProtMatrix.pm: Perl POD document, ASCII text data/bioperl-1.7.7/lib/Bio/Matrix/PSM/PsmHeaderI.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/Matrix/PSM/SiteMatrixI.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/Matrix/PSM/InstanceSite.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/Matrix/PSM/InstanceSiteI.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/Matrix/Generic.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/Matrix/Scoring.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/Matrix/MatrixI.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/Matrix/IO/phylip.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/Matrix/IO/mlagan.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/Matrix/IO/scoring.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/Matrix/PhylipDist.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/PrimarySeq.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/OntologyIO.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/TreeIO/nhx.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/TreeIO/pag.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/TreeIO/nexus.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/TreeIO/newick.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/TreeIO/tabtree.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/TreeIO/lintree.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/TreeIO/cluster.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/TreeIO/phyloxml.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/TreeIO/NewickParser.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/TreeIO/TreeEventBuilder.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/AlignIO/po.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/AlignIO/psi.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/AlignIO/arp.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/AlignIO/maf.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/AlignIO/msf.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/AlignIO/meme.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/AlignIO/mase.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/AlignIO/pfam.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/AlignIO/xmfa.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/AlignIO/mega.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/AlignIO/selex.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/AlignIO/proda.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/AlignIO/nexus.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/AlignIO/fasta.pm: Perl5 module source, ASCII text 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Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/AnnotatableI.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/DescribableI.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/Das/SegmentI.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/Das/FeatureTypeI.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/SearchIO/psl.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/SearchIO/axt.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/SearchIO/waba.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/SearchIO/wise.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/SearchIO/sim4.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/SearchIO/erpin.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/SearchIO/blast.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/SearchIO/fasta.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/SearchIO/gmap_f9.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/SearchIO/infernal.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/SearchIO/rnamotif.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/SearchIO/megablast.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/SearchIO/exonerate.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/SearchIO/blasttable.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/SearchIO/blast_pull.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/SearchIO/cross_match.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/SearchIO/SearchWriterI.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/SearchIO/EventHandlerI.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/SearchIO/Writer/GbrowseGFF.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/SearchIO/Writer/HitTableWriter.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/SearchIO/Writer/HSPTableWriter.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/SearchIO/Writer/TextResultWriter.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/SearchIO/Writer/HTMLResultWriter.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/SearchIO/Writer/ResultTableWriter.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/SearchIO/FastHitEventBuilder.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/SearchIO/SearchResultEventBuilder.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/SearchIO/IteratedSearchResultEventBuilder.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/Align/AlignI.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/Align/Utilities.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/Align/StatisticsI.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/Align/DNAStatistics.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/Align/ProteinStatistics.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/Align/PairwiseStatistics.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/IdCollectionI.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/IdentifiableI.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/CodonUsage/IO.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/CodonUsage/Table.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/Ontology/Term.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/Ontology/Path.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/Ontology/TermI.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/Ontology/PathI.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/Ontology/GOterm.pm: Perl5 module source, ASCII text data/bioperl-1.7.7/lib/Bio/Ontology/OBOterm.pm: Perl5 module source, ASCII text 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