data/caftools-2.0.3/build-aux/ac_cond_with.m4: M4 macro processor script, ASCII text data/caftools-2.0.3/build-aux/cc_warnings.m4: M4 macro processor script, ASCII text data/caftools-2.0.3/build-aux/config.guess: POSIX shell script, ASCII text executable data/caftools-2.0.3/build-aux/config.sub: POSIX shell script, ASCII text executable data/caftools-2.0.3/build-aux/depcomp: POSIX shell script, ASCII text executable data/caftools-2.0.3/build-aux/install-sh: POSIX shell script, ASCII text executable data/caftools-2.0.3/build-aux/missing: POSIX shell script, ASCII text executable data/caftools-2.0.3/README: ASCII text data/caftools-2.0.3/aclocal.m4: M4 macro processor script, ASCII text data/caftools-2.0.3/Makefile.in: makefile script, ASCII text data/caftools-2.0.3/configure: POSIX shell script, ASCII text executable data/caftools-2.0.3/src/Makefile.am: automake makefile script, ASCII text data/caftools-2.0.3/src/Makefile.in: makefile script, ASCII text data/caftools-2.0.3/src/config.h.in: C source, ASCII text data/caftools-2.0.3/src/caf2ace.c: C source, ASCII text, with very long lines data/caftools-2.0.3/src/caf2fastq.c: C source, ASCII text data/caftools-2.0.3/src/caf2gap.c: C source, ASCII text data/caftools-2.0.3/src/caf2gap.h: C source, ASCII text data/caftools-2.0.3/src/g-filedefs.h: C source, ASCII text data/caftools-2.0.3/src/g-io.h: C source, ASCII text data/caftools-2.0.3/src/g-os.h: C source, ASCII text data/caftools-2.0.3/src/gap-dbstruct.h: C source, ASCII text data/caftools-2.0.3/src/os.h: C source, ASCII text data/caftools-2.0.3/src/caf2phrap.c: C source, ASCII text data/caftools-2.0.3/src/caf_build_consensus.c: C source, ASCII text data/caftools-2.0.3/src/caf_check_pads.c: C source, ASCII text data/caftools-2.0.3/src/caf_check_pads.h: C source, ASCII text data/caftools-2.0.3/src/caf_depad.c: C source, ASCII text data/caftools-2.0.3/src/caf_pad.c: C source, ASCII text data/caftools-2.0.3/src/cafcat.c: C source, ASCII text data/caftools-2.0.3/src/cafmerge.c: C source, ASCII text data/caftools-2.0.3/src/fix_quals.c: C source, ASCII text data/caftools-2.0.3/src/nd_clip.c: C source, ASCII text data/caftools-2.0.3/src/nd_edit.c: C source, ASCII text data/caftools-2.0.3/src/ne_clip.c: C source, ASCII text data/caftools-2.0.3/src/np_edit.c: C source, ASCII text data/caftools-2.0.3/src/phd2scf.c: C source, ASCII text data/caftools-2.0.3/src/phrapcons.c: C source, ASCII text data/caftools-2.0.3/src/scf2phd.c: C source, ASCII text data/caftools-2.0.3/src/sdict.c: C source, ASCII text data/caftools-2.0.3/src/templates.c: C source, ASCII text data/caftools-2.0.3/src/acedb/Makefile.am: ASCII text data/caftools-2.0.3/src/acedb/Makefile.in: makefile script, ASCII text data/caftools-2.0.3/src/acedb/freesubs.c: C source, ASCII text data/caftools-2.0.3/src/acedb/freeout.c: C source, ASCII text data/caftools-2.0.3/src/acedb/messclean.c: C source, ASCII text data/caftools-2.0.3/src/acedb/arraysub.c: C source, ASCII text data/caftools-2.0.3/src/acedb/filsubs.c: C source, ASCII text data/caftools-2.0.3/src/acedb/timesubs.c: C source, ASCII text data/caftools-2.0.3/src/acedb/randsubs.c: C source, ASCII text data/caftools-2.0.3/src/acedb/call.c: C source, ASCII text data/caftools-2.0.3/src/acedb/filqng.c: C source, ASCII text data/caftools-2.0.3/src/acedb/dict.c: C source, ASCII text data/caftools-2.0.3/src/acedb/acedb.h: C source, ASCII text data/caftools-2.0.3/src/acedb/call.h: C source, ASCII text data/caftools-2.0.3/src/acedb/freeout.h: C source, ASCII text data/caftools-2.0.3/src/acedb/mydirent.h: C source, ASCII text data/caftools-2.0.3/src/acedb/mytime.h: C source, ASCII text data/caftools-2.0.3/src/acedb/array.h: C source, ASCII text data/caftools-2.0.3/src/acedb/dict.h: C source, ASCII text data/caftools-2.0.3/src/acedb/keyset.h: C source, ASCII text data/caftools-2.0.3/src/acedb/mystdlib.h: C source, ASCII text data/caftools-2.0.3/src/acedb/regular.h: C source, ASCII text data/caftools-2.0.3/src/acedb/messubs.c: C source, ASCII text data/caftools-2.0.3/src/libsrc/Makefile.am: ASCII text data/caftools-2.0.3/src/libsrc/Makefile.in: makefile script, ASCII text data/caftools-2.0.3/src/libsrc/cafseq.c: C source, ASCII text data/caftools-2.0.3/src/libsrc/cafstrings.c: C source, ASCII text data/caftools-2.0.3/src/libsrc/assembly.c: C source, ASCII text, with very long lines data/caftools-2.0.3/src/libsrc/base_edit.c: C source, ASCII text data/caftools-2.0.3/src/libsrc/seq_util.c: C source, ASCII text data/caftools-2.0.3/src/libsrc/clipping.c: C source, ASCII text data/caftools-2.0.3/src/libsrc/consensus.c: C source, ASCII text data/caftools-2.0.3/src/libsrc/fix_tags.c: C source, ASCII text data/caftools-2.0.3/src/libsrc/cafbin.c: C source, ASCII text data/caftools-2.0.3/src/libsrc/padding.c: C source, ASCII text data/caftools-2.0.3/src/libsrc/caf_check.c: C source, ASCII text data/caftools-2.0.3/src/libsrc/pair_memory.c: C source, ASCII text data/caftools-2.0.3/src/libsrc/assinf.c: C source, ASCII text data/caftools-2.0.3/src/libsrc/auto_edit.h: C source, ASCII text data/caftools-2.0.3/src/libsrc/bases.h: C source, ASCII text data/caftools-2.0.3/src/libsrc/caf.h: C source, ASCII text data/caftools-2.0.3/src/libsrc/caf_types.h: C source, ASCII text data/caftools-2.0.3/src/libsrc/cafseq.h: C source, ASCII text data/caftools-2.0.3/src/libsrc/cl.h: C source, ASCII text data/caftools-2.0.3/src/libsrc/myscf.h: C source, ASCII text data/caftools-2.0.3/src/libsrc/padding.h: C source, ASCII text data/caftools-2.0.3/src/libsrc/pair_memory.h: ASCII text data/caftools-2.0.3/src/libsrc/seq_util.h: C source, ASCII text data/caftools-2.0.3/src/libsrc/sw.h: C source, ASCII text data/caftools-2.0.3/src/libsrc/trace_edit.h: ASCII text data/caftools-2.0.3/src/libsrc/tree.h: C source, ASCII text data/caftools-2.0.3/src/libsrc/caf_check.h: C source, ASCII text data/caftools-2.0.3/src/libsrc/consensus.h: C source, ASCII text data/caftools-2.0.3/src/libsrc/assinf.h: C source, ASCII text data/caftools-2.0.3/src/libsrc/readline.c: C source, ASCII text data/caftools-2.0.3/src/libsrc/cl.c: C source, ASCII text data/caftools-2.0.3/src/libsrc/readline.h: C source, ASCII text data/caftools-2.0.3/src/libsrc/complement_scf.c: C source, ASCII text data/caftools-2.0.3/src/libsrc/trace_align.c: C source, ASCII text data/caftools-2.0.3/src/libsrc/trace_quality.c: C source, ASCII text data/caftools-2.0.3/src/libsrc/caf_read_scf.c: C source, ASCII text data/caftools-2.0.3/src/libsrc/scf_cache.c: C source, ASCII text data/caftools-2.0.3/src/libsrc/classify.c: C source, ASCII text data/caftools-2.0.3/src/libsrc/trace_align.h: C source, ASCII text data/caftools-2.0.3/src/libsrc/trace_quality.h: C source, ASCII text data/caftools-2.0.3/src/libsrc/tree_util.c: C source, ASCII text data/caftools-2.0.3/src/libsrc/sgrep.c: C source, ASCII text data/caftools-2.0.3/src/libsrc/sw.c: C source, ASCII text data/caftools-2.0.3/src/libsrc/seq_dict.c: C source, ASCII text data/caftools-2.0.3/src/libsrc/lin_align.c: C source, ASCII text data/caftools-2.0.3/src/libsrc/banded.c: C source, ASCII text data/caftools-2.0.3/src/libsrc/wordhash.c: C source, ASCII text data/caftools-2.0.3/src/libsrc/bases.c: C source, ASCII text data/caftools-2.0.3/src/libsrc/cmp.h: ASCII text data/caftools-2.0.3/src/libsrc/lin_align.h: C source, ASCII text data/caftools-2.0.3/src/libsrc/seq_dict.h: C source, ASCII text data/caftools-2.0.3/src/libsrc/wordhash.h: ASCII text data/caftools-2.0.3/src/libsrc/searchpath.c: C source, ASCII text data/caftools-2.0.3/src/libsrc/seed.c: C source, ASCII text data/caftools-2.0.3/src/libsrc/cmp.c: C source, ASCII text data/caftools-2.0.3/src/libsrc/dir.c: C source, ASCII text data/caftools-2.0.3/src/libsrc/priority_queue.c: C source, ASCII text data/caftools-2.0.3/src/libsrc/ncr.c: C source, ASCII text data/caftools-2.0.3/src/libsrc/ncr.h: ASCII text data/caftools-2.0.3/src/libsrc/priority_queue.h: C source, ASCII text data/caftools-2.0.3/tests/test_data/TestTools.pm: Perl script text executable data/caftools-2.0.3/tests/test_data/caf2phrap.caf: ASCII text data/caftools-2.0.3/tests/test_data/caf2phrap.fasta: ASCII text data/caftools-2.0.3/tests/test_data/caf2phrap.qual: ASCII text data/caftools-2.0.3/tests/test_data/caf_build_consensus.caf: ASCII text data/caftools-2.0.3/tests/test_data/caf_depad.caf: ASCII text data/caftools-2.0.3/tests/test_data/caf_find_misassemblies.caf: ASCII text data/caftools-2.0.3/tests/test_data/caf_pad.caf: ASCII text data/caftools-2.0.3/tests/test_data/cafcat.caf: ASCII text data/caftools-2.0.3/tests/test_data/cafmerge.caf: ASCII text data/caftools-2.0.3/tests/test_data/nd_clip.caf: ASCII text data/caftools-2.0.3/tests/test_data/nd_edit.caf: ASCII text data/caftools-2.0.3/tests/test_data/ne_clip.caf: ASCII text data/caftools-2.0.3/tests/test_data/np_edit.caf: ASCII text data/caftools-2.0.3/tests/test_data/phrapcons.caf: ASCII text data/caftools-2.0.3/tests/test_data/templates.out: ASCII text data/caftools-2.0.3/tests/test_data/test.caf: ASCII text, with very long lines data/caftools-2.0.3/tests/README: awk or perl script, ASCII text data/caftools-2.0.3/tests/Makefile.am: ASCII text data/caftools-2.0.3/tests/Makefile.in: makefile script, ASCII text data/caftools-2.0.3/tests/test_caf2gap: Perl script text executable data/caftools-2.0.3/tests/test_caf2phrap: Perl script text executable data/caftools-2.0.3/tests/test_caf_build_consensus: Perl script text executable data/caftools-2.0.3/tests/test_caf_depad: Perl script text executable data/caftools-2.0.3/tests/test_caf_find_misassemblies: Perl script text executable data/caftools-2.0.3/tests/test_caf_pad: Perl script text executable data/caftools-2.0.3/tests/test_cafcat: Perl script text executable data/caftools-2.0.3/tests/test_cafmerge: Perl script text executable data/caftools-2.0.3/tests/test_fix_quals: Perl script text executable data/caftools-2.0.3/tests/test_nd_clip: Perl script text executable data/caftools-2.0.3/tests/test_nd_edit: Perl script text executable data/caftools-2.0.3/tests/test_ne_clip: Perl script text executable data/caftools-2.0.3/tests/test_np_edit: Perl script text executable data/caftools-2.0.3/tests/test_phrapcons: Perl script text executable data/caftools-2.0.3/tests/test_scf2phd: POSIX shell script, ASCII text executable data/caftools-2.0.3/tests/test_sdict: Perl script text executable data/caftools-2.0.3/tests/test_templates: Perl script text executable data/caftools-2.0.3/man/CAF.5: troff or preprocessor input, ASCII text data/caftools-2.0.3/man/caf2ace.1: troff or preprocessor input, ASCII text data/caftools-2.0.3/man/caf2gap.1: troff or preprocessor input, ASCII text data/caftools-2.0.3/man/caf2phrap.1: troff or preprocessor input, ASCII text data/caftools-2.0.3/man/caf_depad.1: troff or preprocessor input, ASCII text data/caftools-2.0.3/man/caf_pad.1: troff or preprocessor input, ASCII text data/caftools-2.0.3/man/cafcat.1: troff or preprocessor input, ASCII text data/caftools-2.0.3/man/cafmerge.1: troff or preprocessor input, ASCII text data/caftools-2.0.3/man/nd_clip.1: troff or preprocessor input, ASCII text data/caftools-2.0.3/man/phrapcons.1: troff or preprocessor input, ASCII text data/caftools-2.0.3/man/templates.1: troff or preprocessor input, ASCII text data/caftools-2.0.3/man/Makefile.am: ASCII text data/caftools-2.0.3/man/Makefile.in: makefile script, ASCII text data/caftools-2.0.3/config/config.guess: empty data/caftools-2.0.3/config/config.sub: empty data/caftools-2.0.3/config/install-sh: empty data/caftools-2.0.3/config/missing: empty data/caftools-2.0.3/config/mkinstalldirs: empty data/caftools-2.0.3/debian/README.Debian: ASCII text data/caftools-2.0.3/debian/README.source: ASCII text data/caftools-2.0.3/debian/caftools-docs.docs: ASCII text data/caftools-2.0.3/debian/caftools.install: ASCII text data/caftools-2.0.3/debian/changelog: ASCII text data/caftools-2.0.3/debian/compat: ASCII text data/caftools-2.0.3/debian/control: ASCII text data/caftools-2.0.3/debian/copyright: ASCII text data/caftools-2.0.3/debian/patches/autoconf.patch: unified diff output, ASCII text data/caftools-2.0.3/debian/patches/do_not_fail_building_man_pages.patch: unified diff output, ASCII text data/caftools-2.0.3/debian/patches/messubs.patch: unified diff output, ASCII text data/caftools-2.0.3/debian/patches/series: ASCII text data/caftools-2.0.3/debian/rules: a /usr/bin/make -f script, ASCII text executable data/caftools-2.0.3/debian/source/format: ASCII text data/caftools-2.0.3/debian/upstream/metadata: ASCII text data/caftools-2.0.3/debian/watch: ASCII text data/caftools-2.0.3/.pc/.version: ASCII text data/caftools-2.0.3/.pc/.quilt_patches: ASCII text data/caftools-2.0.3/.pc/.quilt_series: ASCII text data/caftools-2.0.3/.pc/applied-patches: ASCII text data/caftools-2.0.3/.pc/messubs.patch/src/acedb/messubs.c: C source, ASCII text data/caftools-2.0.3/.pc/autoconf.patch/configure.in: M4 macro processor script, ASCII text data/caftools-2.0.3/.pc/autoconf.patch/AUTHORS: empty data/caftools-2.0.3/.pc/autoconf.patch/ChangeLog: empty data/caftools-2.0.3/.pc/autoconf.patch/NEWS: empty data/caftools-2.0.3/.pc/autoconf.patch/COPYING: empty data/caftools-2.0.3/.pc/do_not_fail_building_man_pages.patch/Makefile.am: automake makefile script, ASCII text data/caftools-2.0.3/configure.in: M4 macro processor script, ASCII text data/caftools-2.0.3/AUTHORS: ASCII text data/caftools-2.0.3/ChangeLog: ASCII text data/caftools-2.0.3/NEWS: ASCII text data/caftools-2.0.3/COPYING: ASCII text data/caftools-2.0.3/Makefile.am: automake makefile script, ASCII text