data/cd-hit-4.8.1/ChangeLog: ASCII text data/cd-hit-4.8.1/FET.pl: Perl script text executable data/cd-hit-4.8.1/Makefile: makefile script, ASCII text data/cd-hit-4.8.1/README: ASCII text data/cd-hit-4.8.1/cd-hit-auxtools/Makefile: makefile script, ASCII text data/cd-hit-4.8.1/cd-hit-auxtools/bioSequence.cxx: C source, ASCII text data/cd-hit-4.8.1/cd-hit-auxtools/bioSequence.hxx: C++ source, ASCII text data/cd-hit-4.8.1/cd-hit-auxtools/cd-hit-dup-PE-out.pl: Perl script text executable data/cd-hit-4.8.1/cd-hit-auxtools/cdhit-dup.cxx: C++ source, ASCII text data/cd-hit-4.8.1/cd-hit-auxtools/cdhit-lap.cxx: C++ source, ASCII text data/cd-hit-4.8.1/cd-hit-auxtools/mintlib/minArray.hxx: C++ source, ASCII text data/cd-hit-4.8.1/cd-hit-auxtools/mintlib/minBase.hxx: C source, ASCII text data/cd-hit-4.8.1/cd-hit-auxtools/mintlib/minMap.cxx: C source, ASCII text data/cd-hit-4.8.1/cd-hit-auxtools/mintlib/minMap.hxx: C++ source, ASCII text data/cd-hit-4.8.1/cd-hit-auxtools/mintlib/minString.cxx: C source, ASCII text data/cd-hit-4.8.1/cd-hit-auxtools/mintlib/minString.hxx: C++ source, ASCII text data/cd-hit-4.8.1/cd-hit-auxtools/mintlib/minUtility.hxx: C source, ASCII text data/cd-hit-4.8.1/cd-hit-auxtools/read-linker.cxx: C++ source, ASCII text data/cd-hit-4.8.1/cd-hit-clstr_2_blm8.pl: Perl script text executable data/cd-hit-4.8.1/cdhit-2d.c++: C source, ASCII text data/cd-hit-4.8.1/cdhit-454.c++: C source, ASCII text data/cd-hit-4.8.1/cdhit-common.c++: C source, ASCII text data/cd-hit-4.8.1/cdhit-common.h: C++ source, ASCII text data/cd-hit-4.8.1/cdhit-div.c++: C source, ASCII text data/cd-hit-4.8.1/cdhit-est-2d.c++: C source, ASCII text data/cd-hit-4.8.1/cdhit-est.c++: C source, ASCII text data/cd-hit-4.8.1/cdhit-utility.c++: C++ source, ASCII text data/cd-hit-4.8.1/cdhit-utility.h: ASCII text data/cd-hit-4.8.1/cdhit.c++: C source, ASCII text data/cd-hit-4.8.1/clstr2tree.pl: Perl script text executable data/cd-hit-4.8.1/clstr2txt.pl: Perl script text executable data/cd-hit-4.8.1/clstr2xml.pl: Perl script text executable data/cd-hit-4.8.1/clstr_cut.pl: Perl script text executable data/cd-hit-4.8.1/clstr_list.pl: Perl script text executable data/cd-hit-4.8.1/clstr_list_sort.pl: Perl script text executable data/cd-hit-4.8.1/clstr_merge.pl: Perl script text executable data/cd-hit-4.8.1/clstr_merge_noorder.pl: Perl script text executable data/cd-hit-4.8.1/clstr_quality_eval.pl: Perl script text executable data/cd-hit-4.8.1/clstr_quality_eval_by_link.pl: Perl script text executable data/cd-hit-4.8.1/clstr_reduce.pl: Perl script text executable data/cd-hit-4.8.1/clstr_renumber.pl: Perl script text executable data/cd-hit-4.8.1/clstr_rep.pl: Perl script text executable data/cd-hit-4.8.1/clstr_reps_faa_rev.pl: Perl script text executable data/cd-hit-4.8.1/clstr_rev.pl: Perl script text executable data/cd-hit-4.8.1/clstr_select.pl: Perl script text executable data/cd-hit-4.8.1/clstr_select_rep.pl: Perl script text executable data/cd-hit-4.8.1/clstr_size_histogram.pl: Perl script text executable data/cd-hit-4.8.1/clstr_size_stat.pl: Perl script text executable data/cd-hit-4.8.1/clstr_sort_by.pl: Perl script text executable data/cd-hit-4.8.1/clstr_sort_prot_by.pl: Perl script text executable data/cd-hit-4.8.1/clstr_sql_tbl.pl: Perl script text executable data/cd-hit-4.8.1/clstr_sql_tbl_sort.pl: Perl script text executable data/cd-hit-4.8.1/doc/Figure1.png: PNG image data, 914 x 201, 8-bit/color RGBA, non-interlaced data/cd-hit-4.8.1/doc/Figure2.png: PNG image data, 942 x 318, 8-bit/color RGBA, non-interlaced data/cd-hit-4.8.1/doc/Figure3.png: PNG image data, 920 x 317, 8-bit/color RGBA, non-interlaced data/cd-hit-4.8.1/doc/Figure4.png: PNG image data, 729 x 262, 8-bit/color RGBA, non-interlaced data/cd-hit-4.8.1/doc/cd-hit-otu-miseq-Figure-1.png: PNG image data, 1495 x 428, 8-bit/color RGBA, non-interlaced data/cd-hit-4.8.1/doc/cdhit-user-guide.pdf: PDF document, version 1.4 (password protected) data/cd-hit-4.8.1/doc/cdhit-user-guide.tex: LaTeX 2e document, ASCII text, with very long lines data/cd-hit-4.8.1/doc/cdhit-user-guide.wiki: UTF-8 Unicode (with BOM) text, with very long lines data/cd-hit-4.8.1/doc/dokuwiki2latex.dao: LaTeX 2e document, ASCII text data/cd-hit-4.8.1/license.txt: ASCII text data/cd-hit-4.8.1/make_multi_seq.pl: Perl script text executable data/cd-hit-4.8.1/plot_2d.pl: Perl script text executable data/cd-hit-4.8.1/plot_len1.pl: Perl script text executable data/cd-hit-4.8.1/psi-cd-hit/README.psi-cd-hit: ASCII text data/cd-hit-4.8.1/psi-cd-hit/cd-hit-div.pl: Perl script text executable data/cd-hit-4.8.1/psi-cd-hit/clstr_select_rep.pl: Perl script text executable data/cd-hit-4.8.1/psi-cd-hit/clstr_select_seq.pl: Perl script text executable data/cd-hit-4.8.1/psi-cd-hit/fetch_fasta_by_ids.pl: Perl script text executable data/cd-hit-4.8.1/psi-cd-hit/fetch_fasta_exclude_ids.pl: Perl script text executable data/cd-hit-4.8.1/psi-cd-hit/psi-2d.pl: Perl script text executable data/cd-hit-4.8.1/psi-cd-hit/psi-cd-hit-local-old.pl: Perl script text executable data/cd-hit-4.8.1/psi-cd-hit/psi-cd-hit-local.pl: Perl script text executable data/cd-hit-4.8.1/psi-cd-hit/psi-cd-hit-old.pl: Perl script text executable data/cd-hit-4.8.1/psi-cd-hit/psi-cd-hit.pl: Perl script text executable data/cd-hit-4.8.1/psi-cd-hit/qsub-template: ASCII text data/cd-hit-4.8.1/usecases/Miseq-16S/16S-ref-db-PE-splice.pl: Perl script text executable data/cd-hit-4.8.1/usecases/Miseq-16S/NG-Omics-Miseq-16S.pl: Perl script text executable data/cd-hit-4.8.1/usecases/Miseq-16S/NG-Omics-Miseq-16S.py: Python script, ASCII text executable data/cd-hit-4.8.1/usecases/Miseq-16S/NG-Omics-WF.pl: Perl script text executable data/cd-hit-4.8.1/usecases/Miseq-16S/NG-Omics-WF.py: Python script, ASCII text executable data/cd-hit-4.8.1/usecases/Miseq-16S/README: UTF-8 Unicode text data/cd-hit-4.8.1/usecases/Miseq-16S/cd-hit-otu-miseq-PE.pl: Perl script text executable data/cd-hit-4.8.1/usecases/Miseq-16S/clstr_2_OTU_table.pl: Perl script text executable data/cd-hit-4.8.1/usecases/Miseq-16S/filter-chimeric-and-small.pl: Perl script text executable data/cd-hit-4.8.1/usecases/Miseq-16S/filter-chimeric-by-ref.pl: Perl script text executable data/cd-hit-4.8.1/usecases/Miseq-16S/filter-nontop-ref.pl: Perl script text executable data/cd-hit-4.8.1/usecases/Miseq-16S/filter-refonly-cluster.pl: Perl script text executable data/cd-hit-4.8.1/usecases/Miseq-16S/greengene-ann1.pl: Perl script text executable data/cd-hit-4.8.1/usecases/Miseq-16S/pool_samples.pl: Perl script text executable data/cd-hit-4.8.1/usecases/Miseq-16S/silva-ana1.pl: Perl script text executable data/cd-hit-4.8.1/usecases/miRNA-seq/NG-Omics-miRNA-seq.pl: Perl script text executable data/cd-hit-4.8.1/usecases/miRNA-seq/clstr_2_miRNA-table.pl: Perl script text executable data/cd-hit-4.8.1/usecases/miRNA-seq/filter-small-cluster.pl: Perl script text executable data/cd-hit-4.8.1/debian/README.Debian: ASCII text data/cd-hit-4.8.1/debian/cd-hit.examples: ASCII text data/cd-hit-4.8.1/debian/changelog: UTF-8 Unicode text data/cd-hit-4.8.1/debian/control: ASCII text data/cd-hit-4.8.1/debian/copyright: UTF-8 Unicode text data/cd-hit-4.8.1/debian/dirs: ASCII text data/cd-hit-4.8.1/debian/doc-base: ASCII text data/cd-hit-4.8.1/debian/docs: ASCII text data/cd-hit-4.8.1/debian/links: ASCII text data/cd-hit-4.8.1/debian/patches/enable_help2man.patch: unified diff output, ASCII text data/cd-hit-4.8.1/debian/patches/series: ASCII text data/cd-hit-4.8.1/debian/rules: a /usr/bin/make -f script, ASCII text executable data/cd-hit-4.8.1/debian/salsa-ci.yml: ASCII text data/cd-hit-4.8.1/debian/source/format: ASCII text data/cd-hit-4.8.1/debian/tests/control: ASCII text data/cd-hit-4.8.1/debian/tests/run-unit-test: Bourne-Again shell script, ASCII text executable data/cd-hit-4.8.1/debian/tests.cd-hit/example.fa: ASCII text data/cd-hit-4.8.1/debian/upstream/edam: ASCII text data/cd-hit-4.8.1/debian/upstream/metadata: ASCII text data/cd-hit-4.8.1/debian/watch: ASCII text data/cd-hit-4.8.1/.pc/.version: ASCII text data/cd-hit-4.8.1/.pc/.quilt_patches: ASCII text data/cd-hit-4.8.1/.pc/.quilt_series: ASCII text data/cd-hit-4.8.1/.pc/applied-patches: ASCII text data/cd-hit-4.8.1/.pc/enable_help2man.patch/cd-hit-2d-para.pl: Perl script text executable data/cd-hit-4.8.1/.pc/enable_help2man.patch/cd-hit-para.pl: Perl script text executable data/cd-hit-4.8.1/.pc/enable_help2man.patch/cd-hit-div.pl: Perl script text executable data/cd-hit-4.8.1/cd-hit-2d-para.pl: Perl script text executable data/cd-hit-4.8.1/cd-hit-para.pl: Perl script text executable data/cd-hit-4.8.1/cd-hit-div.pl: Perl script text executable