data/clonalframeml-1.12/.gitignore: ASCII text data/clonalframeml-1.12/README.md: ASCII text, with very long lines data/clonalframeml-1.12/src/bank/MLST.h: C++ source, ASCII text data/clonalframeml-1.12/src/bank/approxdf.h: C++ source, ASCII text, with CRLF line terminators data/clonalframeml-1.12/src/bank/census.h: C++ source, ASCII text data/clonalframeml-1.12/src/bank/cmatrix.h: C++ source, ASCII text, with CRLF line terminators data/clonalframeml-1.12/src/bank/coalesce.h: C source, ASCII text, with CRLF line terminators data/clonalframeml-1.12/src/bank/coalescent_control.h: C++ source, ASCII text, with CRLF line terminators data/clonalframeml-1.12/src/bank/coalescent_process.h: C++ source, ASCII text, with CRLF line terminators data/clonalframeml-1.12/src/bank/controlwizard.h: C++ source, ASCII text, with CRLF line terminators data/clonalframeml-1.12/src/bank/ess.h: C++ source, ASCII text, with CRLF line terminators data/clonalframeml-1.12/src/bank/mutation.h: C++ source, ASCII text, with CRLF line terminators data/clonalframeml-1.12/src/bank/pause.h: C source, ASCII text, with CRLF line terminators data/clonalframeml-1.12/src/bank/readme.doc: Composite Document File V2 Document, Little Endian, Os: Windows, Version 5.0, Code page: 1252, Title: Instructions for formatting control files, Author: Wilson, Template: Normal.dot, Last Saved By: Wilson, Revision Number: 14, Name of Creating Application: Microsoft Word 10.0, Total Editing Time: 04:44:00, Create Time/Date: Fri Jul 18 10:57:00 2003, Last Saved Time/Date: Fri Aug 20 12:30:00 2004, Number of Pages: 1, Number of Words: 871, Number of Characters: 4965, Security: 0 data/clonalframeml-1.12/src/bank/revolver.h: C++ source, ASCII text, with CRLF line terminators data/clonalframeml-1.12/src/bank/sort.h: C++ source, ASCII text, with CRLF line terminators data/clonalframeml-1.12/src/bank/tsv.h: C++ source, ASCII text data/clonalframeml-1.12/src/brent.h: C++ source, UTF-8 Unicode text, with CRLF line terminators data/clonalframeml-1.12/src/cfml_results.R: ASCII text data/clonalframeml-1.12/src/coalesce/coalescent_record.h: C++ source, ASCII text, with CRLF line terminators data/clonalframeml-1.12/src/main.cpp: C source, UTF-8 Unicode text, with very long lines data/clonalframeml-1.12/src/main.h: C++ source, ASCII text, with very long lines data/clonalframeml-1.12/src/make.sh: ASCII text data/clonalframeml-1.12/src/myutils/DNA.h: C++ source, ASCII text, with CRLF line terminators data/clonalframeml-1.12/src/myutils/argumentwizard.h: C++ source, ASCII text, with CRLF line terminators data/clonalframeml-1.12/src/myutils/lotri_matrix.h: C++ source, ASCII text, with CRLF line terminators data/clonalframeml-1.12/src/myutils/matrix.h: C++ source, ASCII text, with CRLF line terminators data/clonalframeml-1.12/src/myutils/mydouble.h: C++ source, ASCII text data/clonalframeml-1.12/src/myutils/myerror.h: C++ source, ASCII text data/clonalframeml-1.12/src/myutils/myutils.h: C source, ASCII text, with CRLF line terminators data/clonalframeml-1.12/src/myutils/newick.h: C++ source, ASCII text data/clonalframeml-1.12/src/myutils/random.h: C++ source, ASCII text data/clonalframeml-1.12/src/myutils/utils.h: C++ source, ASCII text, with CRLF line terminators data/clonalframeml-1.12/src/myutils/vector.h: C++ source, ASCII text, with CRLF line terminators data/clonalframeml-1.12/src/powell.h: C++ source, ASCII text, with CRLF line terminators data/clonalframeml-1.12/src/xmfa.h: C source, ASCII text data/clonalframeml-1.12/src/makefile: makefile script, ASCII text data/clonalframeml-1.12/debian/ClonalFrameML.1: troff or preprocessor input, ASCII text data/clonalframeml-1.12/debian/changelog: ASCII text data/clonalframeml-1.12/debian/control: ASCII text data/clonalframeml-1.12/debian/copyright: ASCII text data/clonalframeml-1.12/debian/install: ASCII text data/clonalframeml-1.12/debian/manpages: ASCII text data/clonalframeml-1.12/debian/patches/cross.patch: unified diff output, ASCII text data/clonalframeml-1.12/debian/patches/series: ASCII text data/clonalframeml-1.12/debian/rules: a /usr/bin/make -f script, ASCII text executable data/clonalframeml-1.12/debian/salsa-ci.yml: ASCII text data/clonalframeml-1.12/debian/source/format: ASCII text data/clonalframeml-1.12/debian/upstream/metadata: ASCII text data/clonalframeml-1.12/debian/watch: ASCII text data/clonalframeml-1.12/.pc/.version: ASCII text data/clonalframeml-1.12/.pc/.quilt_patches: ASCII text data/clonalframeml-1.12/.pc/.quilt_series: ASCII text data/clonalframeml-1.12/.pc/applied-patches: ASCII text data/clonalframeml-1.12/.pc/cross.patch/src/makefile: makefile script, ASCII text