data/clonalorigin-1.0/README.md: UTF-8 Unicode text, with very long lines data/clonalorigin-1.0/gui/coloured.ui: ASCII text data/clonalorigin-1.0/gui/colouredimpl.cpp: C source, ASCII text data/clonalorigin-1.0/gui/colouredimpl.h: C++ source, ASCII text data/clonalorigin-1.0/gui/densityontree.cpp: C source, ASCII text data/clonalorigin-1.0/gui/densityontree.h: C++ source, ASCII text data/clonalorigin-1.0/gui/gelmanrubin.ui: ASCII text data/clonalorigin-1.0/gui/gelmanrubinimpl.cpp: C source, ASCII text data/clonalorigin-1.0/gui/gelmanrubinimpl.h: C++ source, ASCII text data/clonalorigin-1.0/gui/gui.cpp: C++ source, ASCII text data/clonalorigin-1.0/gui/gui.pro: ASCII text data/clonalorigin-1.0/gui/heat.ui: ASCII text data/clonalorigin-1.0/gui/heatimpl.cpp: C source, ASCII text, with very long lines data/clonalorigin-1.0/gui/heatimpl.h: C++ source, ASCII text data/clonalorigin-1.0/gui/mainapplicationdbusadaptor.h: C++ source, ASCII text data/clonalorigin-1.0/gui/mainwindow.ui: ASCII text data/clonalorigin-1.0/gui/mainwindowimpl.cpp: C source, ASCII text, with very long lines data/clonalorigin-1.0/gui/mainwindowimpl.h: C++ source, ASCII text data/clonalorigin-1.0/gui/outputfile.cpp: C source, ASCII text, with very long lines data/clonalorigin-1.0/gui/outputfile.h: C++ source, ASCII text data/clonalorigin-1.0/gui/paramcons.cpp: C source, ASCII text data/clonalorigin-1.0/gui/paramcons.h: C++ source, ASCII text data/clonalorigin-1.0/gui/paramconsmult.cpp: C source, ASCII text data/clonalorigin-1.0/gui/paramconsmult.h: C++ source, ASCII text data/clonalorigin-1.0/gui/parammr.cpp: C source, ASCII text data/clonalorigin-1.0/gui/parammr.h: C++ source, ASCII text data/clonalorigin-1.0/gui/paramqt.cpp: C source, ASCII text data/clonalorigin-1.0/gui/paramqt.h: C++ source, ASCII text data/clonalorigin-1.0/gui/paramtreecons.cpp: C source, ASCII text data/clonalorigin-1.0/gui/paramtreecons.h: C++ source, ASCII text data/clonalorigin-1.0/gui/pd.ui: ASCII text data/clonalorigin-1.0/gui/pdimpl.cpp: C source, ASCII text, with very long lines data/clonalorigin-1.0/gui/pdimpl.h: C++ source, ASCII text data/clonalorigin-1.0/gui/pheat.ui: ASCII text data/clonalorigin-1.0/gui/pheatimpl.cpp: C source, ASCII text, with very long lines data/clonalorigin-1.0/gui/pheatimpl.h: C++ source, ASCII text data/clonalorigin-1.0/gui/plot.ui: ASCII text data/clonalorigin-1.0/gui/plotimpl.cpp: C source, ASCII text data/clonalorigin-1.0/gui/plotimpl.h: C++ source, ASCII text data/clonalorigin-1.0/warg/AUTHORS: ASCII text data/clonalorigin-1.0/warg/COPYING: ASCII text data/clonalorigin-1.0/warg/ChangeLog: ASCII text data/clonalorigin-1.0/warg/Makefile.am: automake makefile script, ASCII text data/clonalorigin-1.0/warg/NEWS: ASCII text data/clonalorigin-1.0/warg/README: ASCII text data/clonalorigin-1.0/warg/autogen.sh: POSIX shell script, ASCII text executable data/clonalorigin-1.0/warg/configure.ac: ASCII text data/clonalorigin-1.0/warg/data/Pestis_warg.nwk: ASCII text, with very long lines data/clonalorigin-1.0/warg/data/Pestis_warg.xmfa: ASCII text, with very long lines data/clonalorigin-1.0/warg/data/bac2.nwk: ASCII text, with very long lines, with no line terminators data/clonalorigin-1.0/warg/data/bac2.xmfa: empty data/clonalorigin-1.0/warg/data/data.xmfa: ASCII text data/clonalorigin-1.0/warg/data/ecoli-names.txt: ASCII text data/clonalorigin-1.0/warg/data/ecoli.nwk: ASCII text, with very long lines data/clonalorigin-1.0/warg/data/ecoli_2outgroups.xmfa: ASCII text data/clonalorigin-1.0/warg/data/ecoli_2outgroups1Sample100.nwk: ASCII text, with very long lines data/clonalorigin-1.0/warg/data/ecoli_2outgroupsSample100.nwk: ASCII text, with very long lines data/clonalorigin-1.0/warg/data/feil.nwk: ASCII text, with very long lines, with no line terminators data/clonalorigin-1.0/warg/data/feil.xmfa: ASCII text data/clonalorigin-1.0/warg/data/french.xmfa: ASCII text, with very long lines data/clonalorigin-1.0/warg/data/german.xmfa: ASCII text, with very long lines data/clonalorigin-1.0/warg/data/tree.nwk: ASCII text data/clonalorigin-1.0/warg/m4/gsl.m4: M4 macro processor script, ASCII text data/clonalorigin-1.0/warg/scripts/Makefile.am: ASCII text data/clonalorigin-1.0/warg/scripts/blocksplit.pl: Perl script text executable data/clonalorigin-1.0/warg/scripts/computeMedians.pl: Perl script text executable data/clonalorigin-1.0/warg/scripts/convert.pl: Perl script text executable data/clonalorigin-1.0/warg/scripts/genomeplots_log.R: a /usr/bin/Rscript script, ASCII text executable data/clonalorigin-1.0/warg/scripts/getClonalTree: Perl script text executable data/clonalorigin-1.0/warg/scripts/makeMauveWargFile.pl: Perl script text executable data/clonalorigin-1.0/warg/scripts/rescale.pl: Perl script text executable data/clonalorigin-1.0/warg/scripts/rhomulus.pl: Perl script text executable data/clonalorigin-1.0/warg/src/data.cpp: C++ source, ASCII text, with very long lines data/clonalorigin-1.0/warg/src/data.h: C++ source, UTF-8 Unicode text data/clonalorigin-1.0/warg/src/exponential.h: C++ source, ASCII text data/clonalorigin-1.0/warg/src/metropolis.cpp: C++ source, ASCII text data/clonalorigin-1.0/warg/src/metropolis.h: C++ source, ASCII text data/clonalorigin-1.0/warg/src/move.cpp: C++ source, ASCII text data/clonalorigin-1.0/warg/src/move.h: C++ source, ASCII text data/clonalorigin-1.0/warg/src/moveaddedge.cpp: C++ source, ASCII text data/clonalorigin-1.0/warg/src/moveaddedge.h: C++ source, ASCII text data/clonalorigin-1.0/warg/src/moveageclonal.cpp: C++ source, ASCII text data/clonalorigin-1.0/warg/src/moveageclonal.h: C++ source, ASCII text data/clonalorigin-1.0/warg/src/movedelta.cpp: C++ source, ASCII text data/clonalorigin-1.0/warg/src/movedelta.h: C++ source, ASCII text data/clonalorigin-1.0/warg/src/moveedgechange.cpp: C++ source, ASCII text data/clonalorigin-1.0/warg/src/moveedgechange.h: C++ source, ASCII text data/clonalorigin-1.0/warg/src/movegreedytree.cpp: C++ source, ASCII text data/clonalorigin-1.0/warg/src/movegreedytree.h: C++ source, ASCII text data/clonalorigin-1.0/warg/src/moveregraftclonal.cpp: C++ source, ASCII text data/clonalorigin-1.0/warg/src/moveregraftclonal.h: C++ source, ASCII text data/clonalorigin-1.0/warg/src/moveremedge.cpp: C++ source, ASCII text data/clonalorigin-1.0/warg/src/moveremedge.h: C++ source, ASCII text data/clonalorigin-1.0/warg/src/moverho.cpp: C++ source, ASCII text data/clonalorigin-1.0/warg/src/moverho.h: C++ source, ASCII text data/clonalorigin-1.0/warg/src/movescaletree.cpp: C++ source, ASCII text data/clonalorigin-1.0/warg/src/movescaletree.h: C++ source, ASCII text data/clonalorigin-1.0/warg/src/movesitechange.cpp: C++ source, ASCII text data/clonalorigin-1.0/warg/src/movesitechange.h: C++ source, ASCII text data/clonalorigin-1.0/warg/src/movetheta.cpp: C++ source, ASCII text data/clonalorigin-1.0/warg/src/movetheta.h: C++ source, ASCII text data/clonalorigin-1.0/warg/src/movetimechange.cpp: C++ source, ASCII text data/clonalorigin-1.0/warg/src/movetimechange.h: C++ source, ASCII text data/clonalorigin-1.0/warg/src/mpiutils.cpp: C++ source, ASCII text data/clonalorigin-1.0/warg/src/mpiutils.h: C++ source, ASCII text data/clonalorigin-1.0/warg/src/mydata.cpp: C++ source, ASCII text data/clonalorigin-1.0/warg/src/node.cpp: C++ source, ASCII text data/clonalorigin-1.0/warg/src/node.h: C++ source, ASCII text data/clonalorigin-1.0/warg/src/param.cpp: C++ source, ASCII text data/clonalorigin-1.0/warg/src/param.h: C++ source, ASCII text data/clonalorigin-1.0/warg/src/profilerun.sh: ASCII text data/clonalorigin-1.0/warg/src/recedge.cpp: C++ source, ASCII text data/clonalorigin-1.0/warg/src/recedge.h: C++ source, ASCII text data/clonalorigin-1.0/warg/src/rectree.cpp: C++ source, ASCII text, with very long lines data/clonalorigin-1.0/warg/src/rectree.h: C++ source, ASCII text, with very long lines data/clonalorigin-1.0/warg/src/rng.cpp: C++ source, ASCII text data/clonalorigin-1.0/warg/src/rng.h: C++ source, ASCII text data/clonalorigin-1.0/warg/src/slotallocator.h: C++ source, ASCII text data/clonalorigin-1.0/warg/src/tree.cpp: C++ source, ASCII text data/clonalorigin-1.0/warg/src/tree.h: C++ source, ASCII text data/clonalorigin-1.0/warg/src/truth.xml: XML document, ASCII text, with very long lines data/clonalorigin-1.0/warg/src/wargxml.cpp: C++ source, ASCII text data/clonalorigin-1.0/warg/src/wargxml.h: C++ source, ASCII text data/clonalorigin-1.0/warg/src/weakarg.cpp: C++ source, ASCII text data/clonalorigin-1.0/warg/src/weakarg.h: C++ source, ASCII text data/clonalorigin-1.0/warg/src/Makefile.am: ASCII text, with very long lines data/clonalorigin-1.0/warg/weakarg.pro: ASCII text data/clonalorigin-1.0/debian/changelog: ASCII text data/clonalorigin-1.0/debian/clonalorigin-gui.1: troff or preprocessor input, ASCII text data/clonalorigin-1.0/debian/clonalorigin-gui.manpages: ASCII text data/clonalorigin-1.0/debian/clonalorigin.1: troff or preprocessor input, ASCII text data/clonalorigin-1.0/debian/clonalorigin.README.Debian: ASCII text data/clonalorigin-1.0/debian/clonalorigin.install: ASCII text data/clonalorigin-1.0/debian/clonalorigin.links: ASCII text data/clonalorigin-1.0/debian/clonalorigin.manpages: ASCII text data/clonalorigin-1.0/debian/compat: ASCII text data/clonalorigin-1.0/debian/control: ASCII text data/clonalorigin-1.0/debian/copyright: UTF-8 Unicode text data/clonalorigin-1.0/debian/createmanpages: POSIX shell script, ASCII text executable data/clonalorigin-1.0/debian/patches/portability.patch: unified diff output, ASCII text data/clonalorigin-1.0/debian/patches/qt5.patch: unified diff output, ASCII text data/clonalorigin-1.0/debian/patches/series: ASCII text data/clonalorigin-1.0/debian/rules: a /usr/bin/make -f script, ASCII text executable data/clonalorigin-1.0/debian/source/format: ASCII text data/clonalorigin-1.0/debian/upstream/metadata: ASCII text data/clonalorigin-1.0/debian/warg.1: troff or preprocessor input, ASCII text data/clonalorigin-1.0/debian/watch: ASCII text data/clonalorigin-1.0/.pc/.version: ASCII text data/clonalorigin-1.0/.pc/.quilt_patches: ASCII text data/clonalorigin-1.0/.pc/.quilt_series: ASCII text data/clonalorigin-1.0/.pc/applied-patches: ASCII text data/clonalorigin-1.0/.pc/portability.patch/warg/src/Makefile.am: ASCII text, with very long lines