data/diamond-aligner-2.0.5/.dockerignore: troff or preprocessor input, ASCII text data/diamond-aligner-2.0.5/.gitattributes: ASCII text data/diamond-aligner-2.0.5/.gitignore: ASCII text data/diamond-aligner-2.0.5/.travis.yml: ASCII text data/diamond-aligner-2.0.5/CMakeLists.txt: ASCII text data/diamond-aligner-2.0.5/Dockerfile: ASCII text data/diamond-aligner-2.0.5/LICENSE: ASCII text data/diamond-aligner-2.0.5/README.md: ASCII text data/diamond-aligner-2.0.5/docs/1: cannot open `data/diamond-aligner-2.0.5/docs/1' (No such file or directory) Tutorial.MD: cannot open `Tutorial.MD' (No such file or directory) data/diamond-aligner-2.0.5/docs/2: cannot open `data/diamond-aligner-2.0.5/docs/2' (No such file or directory) Installation.MD: cannot open `Installation.MD' (No such file or directory) data/diamond-aligner-2.0.5/docs/3: cannot open `data/diamond-aligner-2.0.5/docs/3' (No such file or directory) Command: cannot open `Command' (No such file or directory) line: cannot open `line' (No such file or directory) options.MD: cannot open `options.MD' (No such file or directory) data/diamond-aligner-2.0.5/docs/4: cannot open `data/diamond-aligner-2.0.5/docs/4' (No such file or directory) Support.MD: cannot open `Support.MD' (No such file or directory) data/diamond-aligner-2.0.5/docs/5: cannot open `data/diamond-aligner-2.0.5/docs/5' (No such file or directory) Advanced: cannot open `Advanced' (No such file or directory) topics.MD: cannot open `topics.MD' (No such file or directory) data/diamond-aligner-2.0.5/docs/6: cannot open `data/diamond-aligner-2.0.5/docs/6' (No such file or directory) Distributed: cannot open `Distributed' (No such file or directory) computing.MD: cannot open `computing.MD' (No such file or directory) data/diamond-aligner-2.0.5/docs/Documentation.MD: UTF-8 Unicode text data/diamond-aligner-2.0.5/src/ChangeLog: ASCII text data/diamond-aligner-2.0.5/src/align/align.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/align/align.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/align/culling.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/align/culling.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/align/extend.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/align/extend.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/align/gapped.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/align/gapped_filter.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/align/global_ranking/extend.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/align/global_ranking/global_ranking.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/align/global_ranking/global_ranking.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/align/legacy/banded_swipe_pipeline.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/align/legacy/query_mapper.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/align/legacy/query_mapper.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/align/load_hits.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/align/memory.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/align/output.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/align/ranking.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/align/target.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/align/ungapped.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/basic/basic.cpp: C source, ASCII text data/diamond-aligner-2.0.5/src/basic/cbs.cpp: C source, ASCII text data/diamond-aligner-2.0.5/src/basic/cbs.h: C source, ASCII text data/diamond-aligner-2.0.5/src/basic/config.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/basic/config.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/basic/const.h: C source, ASCII text data/diamond-aligner-2.0.5/src/basic/diagonal_segment.h: C source, ASCII text data/diamond-aligner-2.0.5/src/basic/hssp.cpp: C source, ASCII text data/diamond-aligner-2.0.5/src/basic/masking.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/basic/masking.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/basic/match.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/basic/matrix_tables.cpp: C source, ASCII text data/diamond-aligner-2.0.5/src/basic/packed_loc.h: C source, ASCII text data/diamond-aligner-2.0.5/src/basic/packed_sequence.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/basic/packed_transcript.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/basic/parameters.h: C source, ASCII text data/diamond-aligner-2.0.5/src/basic/reduction.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/basic/score_matrix.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/basic/score_matrix.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/basic/seed.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/basic/seed_iterator.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/basic/sequence.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/basic/shape.h: C source, ASCII text data/diamond-aligner-2.0.5/src/basic/shape_config.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/basic/statistics.h: C source, ASCII text data/diamond-aligner-2.0.5/src/basic/translate.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/basic/translated_position.h: C source, ASCII text data/diamond-aligner-2.0.5/src/basic/value.cpp: C source, ASCII text data/diamond-aligner-2.0.5/src/basic/value.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/chaining/chaining.h: C source, ASCII text data/diamond-aligner-2.0.5/src/chaining/greedy_align.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/chaining/smith_waterman.cpp: C source, ASCII text data/diamond-aligner-2.0.5/src/cluster/cluster.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/cluster/cluster_registry.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/cluster/cluster_registry.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/cluster/disjoint_set.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/cluster/mcl.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/cluster/mcl.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/cluster/medoid.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/cluster/multi_step_cluster.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/cluster/multi_step_cluster.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/data/frequent_seeds.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/data/frequent_seeds.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/data/index.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/data/load_seqs.h: C source, ASCII text data/diamond-aligner-2.0.5/src/data/metadata.h: C source, ASCII text data/diamond-aligner-2.0.5/src/data/queries.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/data/queries.h: C source, ASCII text data/diamond-aligner-2.0.5/src/data/ref_dictionary.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/data/ref_dictionary.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/data/reference.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/data/reference.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/data/seed_array.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/data/seed_array.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/data/seed_histogram.cpp: C source, ASCII text data/diamond-aligner-2.0.5/src/data/seed_histogram.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/data/seed_set.cpp: C source, ASCII text data/diamond-aligner-2.0.5/src/data/seed_set.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/data/sequence_set.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/data/string_set.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/data/taxon_list.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/data/taxon_list.h: C source, ASCII text data/diamond-aligner-2.0.5/src/data/taxonomy.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/data/taxonomy.h: C source, ASCII text data/diamond-aligner-2.0.5/src/data/taxonomy_filter.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/data/taxonomy_nodes.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/data/taxonomy_nodes.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/dp/banded_sw.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/dp/comp_based_stats.cpp: C source, ASCII text data/diamond-aligner-2.0.5/src/dp/comp_based_stats.h: C source, ASCII text data/diamond-aligner-2.0.5/src/dp/dp.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/dp/hsp_traits.h: C source, ASCII text data/diamond-aligner-2.0.5/src/dp/needleman_wunsch.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/dp/scan_diags.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/dp/scan_diags.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/dp/score_profile.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/dp/score_vector.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/dp/score_vector_int16.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/dp/score_vector_int8.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/dp/sw_3frame.cpp: C source, ASCII text data/diamond-aligner-2.0.5/src/dp/swipe/banded_3frame_swipe.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/dp/swipe/banded_swipe.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/dp/swipe/swipe.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/dp/swipe/swipe.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/dp/swipe/swipe_wrapper.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/dp/swipe/target_iterator.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/dp/traceback.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/dp/ungapped.h: C source, ASCII text data/diamond-aligner-2.0.5/src/dp/ungapped_align.cpp: C source, ASCII text data/diamond-aligner-2.0.5/src/dp/ungapped_simd.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/dp/ungapped_simd.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/CMakeLists.txt: ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/Cholesky: C source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/CholmodSupport: C source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/Core: C source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/Dense: C source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/Eigen: C source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/Eigenvalues: C source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/Geometry: C source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/Householder: C source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/IterativeLinearSolvers: C source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/Jacobi: C source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/LU: C source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/MetisSupport: C source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/OrderingMethods: C source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/PaStiXSupport: C source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/PardisoSupport: C source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/QR: C source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/QtAlignedMalloc: C source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/SPQRSupport: C source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/SVD: C source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/Sparse: C source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/SparseCholesky: C source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/SparseCore: C source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/SparseLU: C source, UTF-8 Unicode text data/diamond-aligner-2.0.5/src/lib/Eigen/SparseQR: C source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/StdDeque: C source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/StdList: C source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/StdVector: C source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/SuperLUSupport: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/UmfPackSupport: C source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Cholesky/LDLT.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Cholesky/LLT.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Cholesky/LLT_LAPACKE.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/CholmodSupport/CholmodSupport.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/Array.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/ArrayBase.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/ArrayWrapper.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/Assign.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/AssignEvaluator.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/Assign_MKL.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/BandMatrix.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/Block.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/BooleanRedux.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/CommaInitializer.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/ConditionEstimator.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/CoreEvaluators.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/CoreIterators.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/CwiseBinaryOp.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/CwiseNullaryOp.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/CwiseTernaryOp.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/CwiseUnaryOp.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/CwiseUnaryView.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/DenseBase.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/DenseCoeffsBase.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/DenseStorage.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/Diagonal.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/DiagonalMatrix.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/DiagonalProduct.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/Dot.h: C++ source, ASCII text, with very long lines data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/EigenBase.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/ForceAlignedAccess.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/Fuzzy.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/GeneralProduct.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/GenericPacketMath.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/GlobalFunctions.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/IO.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/Inverse.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/Map.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/MapBase.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/MathFunctions.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/MathFunctionsImpl.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/Matrix.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/MatrixBase.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/NestByValue.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/NoAlias.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/NumTraits.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/PermutationMatrix.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/PlainObjectBase.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/Product.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/ProductEvaluators.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/Random.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/Redux.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/Ref.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/Replicate.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/ReturnByValue.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/Reverse.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/Select.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/SelfAdjointView.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/SelfCwiseBinaryOp.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/Solve.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/SolveTriangular.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/SolverBase.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/StableNorm.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/Stride.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/Swap.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/Transpose.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/Transpositions.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/TriangularMatrix.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/VectorBlock.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/VectorwiseOp.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/Visitor.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/arch/AVX/Complex.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/arch/AVX/MathFunctions.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/arch/AVX/PacketMath.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/arch/AVX/TypeCasting.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/arch/AVX512/MathFunctions.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/arch/AVX512/PacketMath.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/arch/AltiVec/Complex.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/arch/AltiVec/MathFunctions.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/arch/AltiVec/PacketMath.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/arch/CUDA/Complex.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/arch/CUDA/Half.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/arch/CUDA/MathFunctions.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/arch/CUDA/PacketMath.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/arch/CUDA/PacketMathHalf.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/arch/CUDA/TypeCasting.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/arch/Default/ConjHelper.h: C source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/arch/Default/Settings.h: C source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/arch/NEON/Complex.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/arch/NEON/MathFunctions.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/arch/NEON/PacketMath.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/arch/SSE/Complex.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/arch/SSE/MathFunctions.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/arch/SSE/PacketMath.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/arch/SSE/TypeCasting.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/arch/ZVector/Complex.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/arch/ZVector/MathFunctions.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/arch/ZVector/PacketMath.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/functors/AssignmentFunctors.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/functors/BinaryFunctors.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/functors/NullaryFunctors.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/functors/StlFunctors.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/functors/TernaryFunctors.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/functors/UnaryFunctors.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/products/GeneralBlockPanelKernel.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/products/GeneralMatrixMatrix.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/products/GeneralMatrixMatrixTriangular.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/products/GeneralMatrixMatrixTriangular_BLAS.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/products/GeneralMatrixMatrix_BLAS.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/products/GeneralMatrixVector.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/products/GeneralMatrixVector_BLAS.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/products/Parallelizer.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/products/SelfadjointMatrixMatrix.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/products/SelfadjointMatrixMatrix_BLAS.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/products/SelfadjointMatrixVector.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/products/SelfadjointMatrixVector_BLAS.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/products/SelfadjointProduct.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/products/SelfadjointRank2Update.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/products/TriangularMatrixMatrix.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/products/TriangularMatrixMatrix_BLAS.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/products/TriangularMatrixVector.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/products/TriangularMatrixVector_BLAS.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/products/TriangularSolverMatrix.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/products/TriangularSolverMatrix_BLAS.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/products/TriangularSolverVector.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/util/BlasUtil.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/util/Constants.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/util/DisableStupidWarnings.h: C source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/util/ForwardDeclarations.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/util/MKL_support.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/util/Macros.h: C source, ASCII text, with very long lines data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/util/Memory.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/util/Meta.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/util/NonMPL2.h: C source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/util/ReenableStupidWarnings.h: C source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/util/StaticAssert.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Core/util/XprHelper.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Eigenvalues/ComplexEigenSolver.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Eigenvalues/ComplexSchur.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Eigenvalues/ComplexSchur_LAPACKE.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Eigenvalues/EigenSolver.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Eigenvalues/GeneralizedEigenSolver.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Eigenvalues/GeneralizedSelfAdjointEigenSolver.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Eigenvalues/HessenbergDecomposition.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Eigenvalues/MatrixBaseEigenvalues.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Eigenvalues/RealQZ.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Eigenvalues/RealSchur.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Eigenvalues/RealSchur_LAPACKE.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Eigenvalues/SelfAdjointEigenSolver_LAPACKE.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Eigenvalues/Tridiagonalization.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Geometry/AlignedBox.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Geometry/AngleAxis.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Geometry/EulerAngles.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Geometry/Homogeneous.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Geometry/Hyperplane.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Geometry/OrthoMethods.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Geometry/ParametrizedLine.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Geometry/Quaternion.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Geometry/Rotation2D.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Geometry/RotationBase.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Geometry/Scaling.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Geometry/Transform.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Geometry/Translation.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Geometry/Umeyama.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Geometry/arch/Geometry_SSE.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Householder/BlockHouseholder.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Householder/Householder.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Householder/HouseholderSequence.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/IterativeLinearSolvers/BasicPreconditioners.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/IterativeLinearSolvers/BiCGSTAB.h: C++ source, UTF-8 Unicode text data/diamond-aligner-2.0.5/src/lib/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h: C++ source, UTF-8 Unicode text data/diamond-aligner-2.0.5/src/lib/Eigen/src/IterativeLinearSolvers/IncompleteLUT.h: C++ source, UTF-8 Unicode text data/diamond-aligner-2.0.5/src/lib/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/IterativeLinearSolvers/LeastSquareConjugateGradient.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/IterativeLinearSolvers/SolveWithGuess.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/Jacobi/Jacobi.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/LU/Determinant.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/LU/FullPivLU.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/LU/InverseImpl.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/LU/PartialPivLU.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/LU/PartialPivLU_LAPACKE.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/LU/arch/Inverse_SSE.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/MetisSupport/MetisSupport.h: C++ source, UTF-8 Unicode text data/diamond-aligner-2.0.5/src/lib/Eigen/src/OrderingMethods/Amd.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/OrderingMethods/Eigen_Colamd.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/OrderingMethods/Ordering.h: C++ source, UTF-8 Unicode text data/diamond-aligner-2.0.5/src/lib/Eigen/src/PaStiXSupport/PaStiXSupport.h: C++ source, UTF-8 Unicode text data/diamond-aligner-2.0.5/src/lib/Eigen/src/PardisoSupport/PardisoSupport.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/QR/ColPivHouseholderQR.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/QR/ColPivHouseholderQR_LAPACKE.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/QR/CompleteOrthogonalDecomposition.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/QR/FullPivHouseholderQR.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/QR/HouseholderQR.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/QR/HouseholderQR_LAPACKE.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/SPQRSupport/SuiteSparseQRSupport.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/SVD/BDCSVD.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/SVD/JacobiSVD.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/SVD/JacobiSVD_LAPACKE.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/SVD/SVDBase.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/SVD/UpperBidiagonalization.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/SparseCholesky/SimplicialCholesky.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/SparseCholesky/SimplicialCholesky_impl.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/SparseCore/AmbiVector.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/SparseCore/CompressedStorage.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/SparseCore/ConservativeSparseSparseProduct.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/SparseCore/MappedSparseMatrix.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/SparseCore/SparseAssign.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/SparseCore/SparseBlock.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/SparseCore/SparseColEtree.h: C++ source, UTF-8 Unicode text data/diamond-aligner-2.0.5/src/lib/Eigen/src/SparseCore/SparseCompressedBase.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/SparseCore/SparseCwiseBinaryOp.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/SparseCore/SparseCwiseUnaryOp.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/SparseCore/SparseDenseProduct.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/SparseCore/SparseDiagonalProduct.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/SparseCore/SparseDot.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/SparseCore/SparseFuzzy.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/SparseCore/SparseMap.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/SparseCore/SparseMatrix.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/SparseCore/SparseMatrixBase.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/SparseCore/SparsePermutation.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/SparseCore/SparseProduct.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/SparseCore/SparseRedux.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/SparseCore/SparseRef.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/SparseCore/SparseSelfAdjointView.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/SparseCore/SparseSolverBase.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/SparseCore/SparseSparseProductWithPruning.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/SparseCore/SparseTranspose.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/SparseCore/SparseTriangularView.h: C++ source, UTF-8 Unicode text data/diamond-aligner-2.0.5/src/lib/Eigen/src/SparseCore/SparseUtil.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/SparseCore/SparseVector.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/SparseCore/SparseView.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/SparseCore/TriangularSolver.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/SparseLU/SparseLU.h: C++ source, UTF-8 Unicode text data/diamond-aligner-2.0.5/src/lib/Eigen/src/SparseLU/SparseLUImpl.h: C++ source, UTF-8 Unicode text, with very long lines data/diamond-aligner-2.0.5/src/lib/Eigen/src/SparseLU/SparseLU_Memory.h: C++ source, UTF-8 Unicode text data/diamond-aligner-2.0.5/src/lib/Eigen/src/SparseLU/SparseLU_Structs.h: C++ source, UTF-8 Unicode text data/diamond-aligner-2.0.5/src/lib/Eigen/src/SparseLU/SparseLU_SupernodalMatrix.h: C++ source, UTF-8 Unicode text data/diamond-aligner-2.0.5/src/lib/Eigen/src/SparseLU/SparseLU_Utils.h: C++ source, UTF-8 Unicode text data/diamond-aligner-2.0.5/src/lib/Eigen/src/SparseLU/SparseLU_column_bmod.h: C++ source, UTF-8 Unicode text data/diamond-aligner-2.0.5/src/lib/Eigen/src/SparseLU/SparseLU_column_dfs.h: C++ source, UTF-8 Unicode text data/diamond-aligner-2.0.5/src/lib/Eigen/src/SparseLU/SparseLU_copy_to_ucol.h: C++ source, UTF-8 Unicode text data/diamond-aligner-2.0.5/src/lib/Eigen/src/SparseLU/SparseLU_gemm_kernel.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h: C++ source, UTF-8 Unicode text data/diamond-aligner-2.0.5/src/lib/Eigen/src/SparseLU/SparseLU_kernel_bmod.h: C++ source, UTF-8 Unicode text data/diamond-aligner-2.0.5/src/lib/Eigen/src/SparseLU/SparseLU_panel_bmod.h: C++ source, UTF-8 Unicode text data/diamond-aligner-2.0.5/src/lib/Eigen/src/SparseLU/SparseLU_panel_dfs.h: C++ source, UTF-8 Unicode text, with very long lines data/diamond-aligner-2.0.5/src/lib/Eigen/src/SparseLU/SparseLU_pivotL.h: C++ source, UTF-8 Unicode text data/diamond-aligner-2.0.5/src/lib/Eigen/src/SparseLU/SparseLU_pruneL.h: C++ source, UTF-8 Unicode text data/diamond-aligner-2.0.5/src/lib/Eigen/src/SparseLU/SparseLU_relax_snode.h: C++ source, UTF-8 Unicode text data/diamond-aligner-2.0.5/src/lib/Eigen/src/SparseQR/SparseQR.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/StlSupport/StdDeque.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/StlSupport/StdList.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/StlSupport/StdVector.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/StlSupport/details.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/SuperLUSupport/SuperLUSupport.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/UmfPackSupport/UmfPackSupport.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/misc/Image.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/misc/Kernel.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/misc/RealSvd2x2.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/misc/blas.h: C source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/misc/lapack.h: C source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/misc/lapacke.h: C source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/misc/lapacke_mangling.h: C source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/plugins/ArrayCwiseBinaryOps.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/plugins/ArrayCwiseUnaryOps.h: HTML document, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/plugins/BlockMethods.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/plugins/CommonCwiseBinaryOps.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/plugins/CommonCwiseUnaryOps.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/plugins/MatrixCwiseBinaryOps.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/Eigen/src/plugins/MatrixCwiseUnaryOps.h: ASCII text data/diamond-aligner-2.0.5/src/lib/MemoryPool/MemoryPool.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/MemoryPool/MemoryPool.tcc: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/alp/njn_approx.hpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/alp/njn_doubletype.hpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/alp/njn_dynprogprob.cpp: C source, ASCII text data/diamond-aligner-2.0.5/src/lib/alp/njn_dynprogprob.hpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/alp/njn_dynprogproblim.cpp: C source, ASCII text data/diamond-aligner-2.0.5/src/lib/alp/njn_dynprogproblim.hpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/alp/njn_dynprogprobproto.cpp: C source, ASCII text data/diamond-aligner-2.0.5/src/lib/alp/njn_dynprogprobproto.hpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/alp/njn_function.hpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/alp/njn_integer.hpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/alp/njn_ioutil.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/alp/njn_ioutil.hpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/alp/njn_localmaxstat.cpp: C source, ASCII text, with very long lines data/diamond-aligner-2.0.5/src/lib/alp/njn_localmaxstat.hpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/alp/njn_localmaxstatmatrix.cpp: C source, ASCII text data/diamond-aligner-2.0.5/src/lib/alp/njn_localmaxstatmatrix.hpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/alp/njn_localmaxstatutil.cpp: C source, ASCII text data/diamond-aligner-2.0.5/src/lib/alp/njn_localmaxstatutil.hpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/alp/njn_matrix.hpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/alp/njn_memutil.hpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/alp/njn_random.cpp: C source, ASCII text data/diamond-aligner-2.0.5/src/lib/alp/njn_random.hpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/alp/njn_root.hpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/alp/njn_uniform.hpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/alp/njn_vector.hpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/alp/sls_alignment_evaluer.cpp: C++ source, ASCII text, with very long lines data/diamond-aligner-2.0.5/src/lib/alp/sls_alignment_evaluer.hpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/alp/sls_alp.cpp: C source, ASCII text, with very long lines data/diamond-aligner-2.0.5/src/lib/alp/sls_alp.hpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/alp/sls_alp_data.cpp: C++ source, ASCII text, with very long lines data/diamond-aligner-2.0.5/src/lib/alp/sls_alp_data.hpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/alp/sls_alp_regression.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/alp/sls_alp_regression.hpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/alp/sls_alp_sim.cpp: C++ source, ASCII text, with very long lines data/diamond-aligner-2.0.5/src/lib/alp/sls_alp_sim.hpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/alp/sls_basic.cpp: C source, ASCII text data/diamond-aligner-2.0.5/src/lib/alp/sls_basic.hpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/alp/sls_normal_distr_array.hpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/alp/sls_pvalues.cpp: C++ source, ASCII text, with very long lines data/diamond-aligner-2.0.5/src/lib/alp/sls_pvalues.hpp: C++ source, Non-ISO extended-ASCII text data/diamond-aligner-2.0.5/src/lib/psnip/builtin.h: C source, ASCII text data/diamond-aligner-2.0.5/src/lib/psnip/endian.h: ASCII text data/diamond-aligner-2.0.5/src/lib/tantan/LambdaCalculator.cc: C++ source, ASCII text data/diamond-aligner-2.0.5/src/lib/tantan/LambdaCalculator.hh: C++ source, ASCII text data/diamond-aligner-2.0.5/src/output/blast_pairwise_format.cpp: C source, ASCII text data/diamond-aligner-2.0.5/src/output/blast_tab_format.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/output/clustering_format.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/output/clustering_variables.cpp: C source, ASCII text data/diamond-aligner-2.0.5/src/output/clustering_variables.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/output/daa_file.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/output/daa_record.cpp: C source, ASCII text data/diamond-aligner-2.0.5/src/output/daa_record.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/output/daa_write.h: C source, ASCII text data/diamond-aligner-2.0.5/src/output/join_blocks.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/output/output.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/output/output_format.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/output/output_format.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/output/output_sink.cpp: C source, ASCII text data/diamond-aligner-2.0.5/src/output/paf_format.cpp: C source, ASCII text data/diamond-aligner-2.0.5/src/output/sam_format.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/output/target_culling.cpp: C source, ASCII text data/diamond-aligner-2.0.5/src/output/target_culling.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/output/taxon_format.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/output/view.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/output/xml_format.cpp: C source, ASCII text data/diamond-aligner-2.0.5/src/run/double_indexed.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/run/main.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/run/tools.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/run/tools.h: C source, ASCII text data/diamond-aligner-2.0.5/src/run/workflow.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/search/collision.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/search/collision.h: C source, ASCII text data/diamond-aligner-2.0.5/src/search/finger_print.h: C source, ASCII text data/diamond-aligner-2.0.5/src/search/left_most.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/search/search.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/search/seed_complexity.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/search/setup.cpp: C source, ASCII text data/diamond-aligner-2.0.5/src/search/sse_dist.h: C source, ASCII text data/diamond-aligner-2.0.5/src/search/stage0.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/search/stage1.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/search/stage2.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/search/trace_pt_buffer.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/test/data.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/test/simulate.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/test/test.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/test/test.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/test/test_cases.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/tools/benchmark.cpp: C++ source, ASCII text, with very long lines data/diamond-aligner-2.0.5/src/tools/benchmark_io.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/tools/merge_tsv.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/tools/roc.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/tools/rocid.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/tools/tools.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/tools/tsv_record.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/tools/tsv_record.h: C source, ASCII text data/diamond-aligner-2.0.5/src/util/algo/MurmurHash3.cpp: C source, ASCII text data/diamond-aligner-2.0.5/src/util/algo/MurmurHash3.h: C source, ASCII text data/diamond-aligner-2.0.5/src/util/algo/algo.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/algo/all_vs_all.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/algo/edge_vec.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/algo/edge_vec.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/algo/greedy_vortex_cover.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/algo/hash_join.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/algo/join_result.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/algo/pattern_matcher.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/algo/radix_cluster.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/algo/radix_sort.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/algo/upgma.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/algo/upgma_mc.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/algo/varint.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/async_buffer.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/binary_buffer.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/command_line_parser.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/command_line_parser.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/data_structures/array.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/data_structures/bit_vector.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/data_structures/compact_array.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/data_structures/double_array.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/data_structures/double_iterator.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/data_structures/fixed_array.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/data_structures/flat_array.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/data_structures/hash_table.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/data_structures/mem_buffer.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/data_structures/range_partition.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/double_buffer.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/dynamic_iterator.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/escape_sequences.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/hash_function.h: C source, ASCII text data/diamond-aligner-2.0.5/src/util/hash_table.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/interval.h: C source, ASCII text data/diamond-aligner-2.0.5/src/util/interval_partition.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/intrin.h: C source, ASCII text data/diamond-aligner-2.0.5/src/util/io/async_file.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/io/compressed_stream.cpp: C source, ASCII text data/diamond-aligner-2.0.5/src/util/io/compressed_stream.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/io/consumer.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/io/deserializer.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/io/deserializer.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/io/exceptions.h: C source, ASCII text data/diamond-aligner-2.0.5/src/util/io/file_backed_buffer.h: C source, ASCII text data/diamond-aligner-2.0.5/src/util/io/file_sink.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/io/file_sink.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/io/file_source.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/io/file_source.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/io/input_file.cpp: C source, ASCII text data/diamond-aligner-2.0.5/src/util/io/input_file.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/io/input_stream_buffer.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/io/input_stream_buffer.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/io/output_file.cpp: C source, ASCII text data/diamond-aligner-2.0.5/src/util/io/output_file.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/io/output_stream_buffer.cpp: C source, ASCII text data/diamond-aligner-2.0.5/src/util/io/output_stream_buffer.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/io/record_reader.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/io/serializer.cpp: C source, ASCII text data/diamond-aligner-2.0.5/src/util/io/serializer.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/io/stream_entity.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/io/temp_file.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/io/temp_file.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/io/text_input_file.cpp: C source, ASCII text data/diamond-aligner-2.0.5/src/util/io/text_input_file.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/log_stream.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/map.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/math/integer.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/math/sparse_matrix.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/math/sparse_matrix.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/memory/alignment.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/merge_sort.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/parallel/filestack.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/parallel/filestack.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/parallel/multiprocessing.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/parallel/multiprocessing.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/parallel/parallelizer.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/parallel/parallelizer.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/parallel/thread_pool.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/ptr_vector.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/queue.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/range.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/scores/cutoff_table.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/search/seed_table.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/search/seed_table.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/seq_file_format.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/seq_file_format.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/sequence/sequence.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/sequence/sequence.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/simd.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/simd.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/simd/transpose.h: C source, ASCII text data/diamond-aligner-2.0.5/src/util/simd/transpose16x16.h: C source, ASCII text data/diamond-aligner-2.0.5/src/util/simd/transpose32x32.h: C source, ASCII text data/diamond-aligner-2.0.5/src/util/simd/vector.h: C source, ASCII text data/diamond-aligner-2.0.5/src/util/simd/vector8_avx2.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/simd/vector8_sse.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/simd/vector_generic.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/string/string.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/string/string.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/string/tokenizer.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/system.h: C source, ASCII text data/diamond-aligner-2.0.5/src/util/system/endianness.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/system/getRSS.cpp: C source, ASCII text data/diamond-aligner-2.0.5/src/util/system/system.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/system/system.h: C source, ASCII text data/diamond-aligner-2.0.5/src/util/system_c.h: C source, ASCII text data/diamond-aligner-2.0.5/src/util/tantan.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/tantan.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/task_queue.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/text_buffer.h: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/util.cpp: C++ source, ASCII text data/diamond-aligner-2.0.5/src/util/util.h: C++ source, ASCII text data/diamond-aligner-2.0.5/debian/README.test: UTF-8 Unicode text data/diamond-aligner-2.0.5/debian/changelog: UTF-8 Unicode text data/diamond-aligner-2.0.5/debian/control: ASCII text data/diamond-aligner-2.0.5/debian/copyright: ASCII text data/diamond-aligner-2.0.5/debian/diamond.1: troff or preprocessor input, ASCII text data/diamond-aligner-2.0.5/debian/docs: ASCII text data/diamond-aligner-2.0.5/debian/links: ASCII text data/diamond-aligner-2.0.5/debian/manpages: ASCII text data/diamond-aligner-2.0.5/debian/rules: a /usr/bin/make -f script, ASCII text executable data/diamond-aligner-2.0.5/debian/salsa-ci.yml: ASCII text data/diamond-aligner-2.0.5/debian/source/format: ASCII text data/diamond-aligner-2.0.5/debian/source/include-binaries: ASCII text data/diamond-aligner-2.0.5/debian/tests/control: ASCII text data/diamond-aligner-2.0.5/debian/tests/diamond-calls: POSIX shell script, ASCII text executable data/diamond-aligner-2.0.5/debian/tests/run-unit-test: Bourne-Again shell script, ASCII text executable data/diamond-aligner-2.0.5/debian/tests/test/C.faa: ASCII text data/diamond-aligner-2.0.5/debian/tests/test/C.faa.diamond.dmnd: data data/diamond-aligner-2.0.5/debian/tests/test/C2.faa: ASCII text data/diamond-aligner-2.0.5/debian/tests/test/C2.faa.diamond.dmnd: data data/diamond-aligner-2.0.5/debian/tests/test/E.faa: ASCII text data/diamond-aligner-2.0.5/debian/tests/test/E.faa.diamond.dmnd: data data/diamond-aligner-2.0.5/debian/tests/test/L.faa: ASCII text data/diamond-aligner-2.0.5/debian/tests/test/L.faa.diamond.dmnd: data data/diamond-aligner-2.0.5/debian/tests/test/M.faa: ASCII text data/diamond-aligner-2.0.5/debian/tests/test/M.faa.diamond.dmnd: data data/diamond-aligner-2.0.5/debian/tests/test/README.data: ASCII text data/diamond-aligner-2.0.5/debian/upstream/metadata: ASCII text data/diamond-aligner-2.0.5/debian/watch: ASCII text data/diamond-aligner-2.0.5/.pc/.version: ASCII text data/diamond-aligner-2.0.5/.pc/.quilt_patches: ASCII text data/diamond-aligner-2.0.5/.pc/.quilt_series: ASCII text data/diamond-aligner-2.0.5/.pc/applied-patches: empty