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data/genometools-1.6.1+ds/gtruby/sketch_parsed.rb: Ruby script, ASCII text data/genometools-1.6.1+ds/CHANGELOG: ASCII text data/genometools-1.6.1+ds/src/mgth/mg_outputwriter.h: C source, ASCII text data/genometools-1.6.1+ds/src/mgth/mg_combinedscore.c: C source, ASCII text data/genometools-1.6.1+ds/src/mgth/mg_codon.c: C source, ASCII text data/genometools-1.6.1+ds/src/mgth/mg_combinedscore.h: C source, ASCII text data/genometools-1.6.1+ds/src/mgth/mg_xmlparser.c: C source, ASCII text data/genometools-1.6.1+ds/src/mgth/mg_xmlparser.h: C source, ASCII text data/genometools-1.6.1+ds/src/mgth/mg_computepath.h: C source, ASCII text data/genometools-1.6.1+ds/src/mgth/mg_outputwriter.c: C source, ASCII text data/genometools-1.6.1+ds/src/mgth/metagenomethreader.c: C source, ASCII text data/genometools-1.6.1+ds/src/mgth/mg_compute_gene_prediction.h: C source, ASCII text data/genometools-1.6.1+ds/src/mgth/mg_reverse.c: C source, ASCII text data/genometools-1.6.1+ds/src/mgth/mg_reverse.h: C source, ASCII text data/genometools-1.6.1+ds/src/mgth/mg_codon.h: C source, ASCII text data/genometools-1.6.1+ds/src/mgth/mg_computepath.c: C source, ASCII text data/genometools-1.6.1+ds/src/mgth/mg_compute_gene_prediction.c: C source, ASCII text data/genometools-1.6.1+ds/src/mgth/metagenomethreader.h: C source, ASCII text data/genometools-1.6.1+ds/src/gtr.h: C source, ASCII text data/genometools-1.6.1+ds/src/gtt.c: C source, ASCII text data/genometools-1.6.1+ds/src/interactive.h: C source, ASCII text data/genometools-1.6.1+ds/src/examples/custom_stream.c: C source, ASCII text data/genometools-1.6.1+ds/src/examples/sketch_parsed_with_ordering.c: C source, ASCII text data/genometools-1.6.1+ds/src/examples/gff3sort.c: C source, ASCII text data/genometools-1.6.1+ds/src/examples/Makefile: makefile script, ASCII text data/genometools-1.6.1+ds/src/examples/gtkviewer.c: C source, ASCII text data/genometools-1.6.1+ds/src/examples/noop.c: C source, ASCII text 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source, ASCII text data/genometools-1.6.1+ds/src/tools/gt_shredder.h: C source, ASCII text data/genometools-1.6.1+ds/src/tools/gt_guessprot.c: C source, ASCII text data/genometools-1.6.1+ds/src/tools/gt_speck.c: C source, ASCII text data/genometools-1.6.1+ds/src/tools/gt_seqlensort.c: C source, ASCII text data/genometools-1.6.1+ds/src/tools/gt_packedindex_trsuftab.h: C source, ASCII text data/genometools-1.6.1+ds/src/tools/gt_encseq_check.c: C source, ASCII text data/genometools-1.6.1+ds/src/tools/gt_script_filter.c: C source, ASCII text data/genometools-1.6.1+ds/src/tools/gt_compressedbits.c: C source, ASCII text data/genometools-1.6.1+ds/src/tools/gt_condenseq_extract.c: C source, ASCII text data/genometools-1.6.1+ds/src/tools/gt_eval.c: C source, ASCII text data/genometools-1.6.1+ds/src/tools/gt_script_filter.h: C source, ASCII text data/genometools-1.6.1+ds/src/tools/gt_consensus_sa.h: C source, ASCII text data/genometools-1.6.1+ds/src/tools/gt_extracttarget.c: C source, ASCII text 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source, ASCII text data/genometools-1.6.1+ds/src/tools/gt_compreads_decompress.h: C source, ASCII text data/genometools-1.6.1+ds/src/tools/gt_compreads_compress.c: C source, ASCII text data/genometools-1.6.1+ds/src/tools/gt_inlineseq_split.h: C source, ASCII text data/genometools-1.6.1+ds/src/tools/gt_regioncov.h: C source, ASCII text data/genometools-1.6.1+ds/src/tools/gt_snpper.h: C source, ASCII text data/genometools-1.6.1+ds/src/tools/gt_seqtransform.h: C source, ASCII text data/genometools-1.6.1+ds/src/tools/gt_fastq_sample.h: C source, ASCII text data/genometools-1.6.1+ds/src/tools/gt_packedindex_trsuftab.c: C source, ASCII text data/genometools-1.6.1+ds/src/tools/gt_readjoiner.h: C source, ASCII text data/genometools-1.6.1+ds/src/tools/gt_idxlocali.c: C source, ASCII text data/genometools-1.6.1+ds/src/tools/gt_parsexrf.c: C source, ASCII text data/genometools-1.6.1+ds/src/tools/gt_gff3validator.c: C source, ASCII text data/genometools-1.6.1+ds/src/tools/gt_compressedbits.h: C source, ASCII text data/genometools-1.6.1+ds/src/tools/gt_congruence.h: C source, ASCII text data/genometools-1.6.1+ds/src/tools/gt_encseq_md5.c: C source, ASCII text data/genometools-1.6.1+ds/src/tools/gt_condenseq.c: C source, ASCII text data/genometools-1.6.1+ds/src/tools/gt_csa.c: C source, ASCII text data/genometools-1.6.1+ds/src/tools/gt_splitfasta.c: C source, ASCII text data/genometools-1.6.1+ds/src/tools/gt_inlineseq_add.h: C source, ASCII text data/genometools-1.6.1+ds/src/tools/gt_inlineseq_split.c: C source, ASCII text data/genometools-1.6.1+ds/src/tools/gt_wtree_bench.h: C source, ASCII text data/genometools-1.6.1+ds/src/tools/gt_tallymer.h: C source, ASCII text data/genometools-1.6.1+ds/src/tools/gt_condenseq_extract.h: C source, ASCII text data/genometools-1.6.1+ds/src/tools/gt_packedindex_chk_search.h: C source, ASCII text data/genometools-1.6.1+ds/src/tools/gt_compreads_refdecompress.h: C source, ASCII text data/genometools-1.6.1+ds/src/tools/gt_snpper.c: C source, ASCII text data/genometools-1.6.1+ds/src/tools/gt_compreads_refcompress.h: C source, ASCII text data/genometools-1.6.1+ds/src/tools/gt_id_to_md5.h: C source, ASCII text data/genometools-1.6.1+ds/src/tools/gt_orffinder.h: C source, ASCII text data/genometools-1.6.1+ds/src/tools/gt_kmer_database.c: C source, ASCII text data/genometools-1.6.1+ds/src/tools/gt_tagerator.c: C source, ASCII text data/genometools-1.6.1+ds/src/tools/gt_dupfeat.h: C source, ASCII text data/genometools-1.6.1+ds/src/tools/gt_wtree_bench.c: C source, ASCII text data/genometools-1.6.1+ds/src/tools/gt_readjoiner_prefilter.c: C source, ASCII text data/genometools-1.6.1+ds/src/tools/gt_condenseq_info.c: C source, ASCII text data/genometools-1.6.1+ds/src/tools/gt_cds.h: C source, ASCII text data/genometools-1.6.1+ds/src/tools/gt_interfeat.c: C source, ASCII text data/genometools-1.6.1+ds/src/tools/gt_extractfeat.c: C source, ASCII text data/genometools-1.6.1+ds/src/tools/gt_condenseq_info.h: C source, ASCII text 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source, ASCII text data/genometools-1.6.1+ds/src/tools/gt_condenseq_hmmsearch.h: C source, ASCII text data/genometools-1.6.1+ds/src/tools/gt_condenseq_compress.c: C source, ASCII text data/genometools-1.6.1+ds/src/tools/gt_mkfmindex.c: C source, ASCII text data/genometools-1.6.1+ds/src/tools/gt_packedindex_chk_integrity.h: C source, ASCII text data/genometools-1.6.1+ds/src/tools/gt_clean.c: C source, ASCII text data/genometools-1.6.1+ds/src/tools/gt_shredder.c: C source, ASCII text data/genometools-1.6.1+ds/src/tools/gt_genomediff.c: C source, ASCII text data/genometools-1.6.1+ds/src/tools/gt_condenseq_blast.c: C source, ASCII text data/genometools-1.6.1+ds/src/tools/gt_speck.h: C source, ASCII text data/genometools-1.6.1+ds/src/tools/gt_packedindex_chk_integrity.c: C source, ASCII text data/genometools-1.6.1+ds/src/tools/gt_prebwt.c: C source, ASCII text data/genometools-1.6.1+ds/src/tools/gt_consensus_sa.c: C source, ASCII text data/genometools-1.6.1+ds/src/tools/gt_mkfeatureindex.h: C source, ASCII text data/genometools-1.6.1+ds/src/tools/gt_linspace_align.c: C source, ASCII text data/genometools-1.6.1+ds/src/tools/gt_mergeesa.h: C source, ASCII text data/genometools-1.6.1+ds/src/tools/gt_hop.h: C source, ASCII text data/genometools-1.6.1+ds/src/tools/gt_simreads.h: C source, ASCII text data/genometools-1.6.1+ds/src/tools/gt_encseq2spm.c: C source, ASCII text data/genometools-1.6.1+ds/src/tools/gt_idxlocali.h: C source, ASCII text data/genometools-1.6.1+ds/src/tools/gt_seqtranslate.c: C source, ASCII text data/genometools-1.6.1+ds/src/tools/gt_repfind.c: C source, ASCII text data/genometools-1.6.1+ds/src/tools/gt_seed_extend.h: C source, ASCII text data/genometools-1.6.1+ds/src/tools/gt_matstat.h: C source, ASCII text data/genometools-1.6.1+ds/src/tools/gt_paircmp.c: C source, ASCII text data/genometools-1.6.1+ds/src/tools/gt_sequniq.c: C source, ASCII text data/genometools-1.6.1+ds/src/tools/gt_packedindex_chk_search.c: C source, ASCII text 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data/genometools-1.6.1+ds/src/ltr/ltrharvest_fasta_out_visitor.c: C source, ASCII text data/genometools-1.6.1+ds/src/ltr/ltr_cluster_prepare_seq_visitor.c: C source, ASCII text data/genometools-1.6.1+ds/src/ltr/ltr_input_check_visitor.c: C source, ASCII text data/genometools-1.6.1+ds/src/ltr/ltrdigest_strand_assign_visitor.c: C source, ASCII text data/genometools-1.6.1+ds/src/ltr/ltrharvest_fasta_out_visitor.h: C source, ASCII text data/genometools-1.6.1+ds/src/ltr/ltrharvest_fasta_out_stream.c: C source, ASCII text data/genometools-1.6.1+ds/src/ltr/pdom_model_set.c: C source, ASCII text data/genometools-1.6.1+ds/src/ltr/ltrharvest_fasta_out_stream.h: C source, ASCII text data/genometools-1.6.1+ds/src/ltr/gt_ltrclustering.c: C source, ASCII text data/genometools-1.6.1+ds/src/ltr/ltr_classify_stream.c: C source, ASCII text data/genometools-1.6.1+ds/src/ltr/ltrdigest_file_out_stream.h: C source, ASCII text data/genometools-1.6.1+ds/src/ltr/ltr_classify_stream_api.h: C source, ASCII text data/genometools-1.6.1+ds/src/ltr/ltr_cluster_stream_api.h: C source, ASCII text data/genometools-1.6.1+ds/src/ltr/ltr_cluster_stream.h: C source, ASCII text data/genometools-1.6.1+ds/src/ltr/ltr_cluster_prepare_seq_visitor.h: C source, ASCII text data/genometools-1.6.1+ds/src/ltr/pdom_model_set.h: C source, ASCII text data/genometools-1.6.1+ds/src/ltr/ltrharvest_tabout_stream.h: C source, ASCII text data/genometools-1.6.1+ds/src/ltr/ltr_four_char_motif.c: C source, ASCII text data/genometools-1.6.1+ds/src/ltr/ltrdigest_ppt_visitor.c: C source, ASCII text data/genometools-1.6.1+ds/src/ltr/ltr_refseq_match_stream_api.h: C source, ASCII text data/genometools-1.6.1+ds/src/ltr/ltr_refseq_match_stream.c: C source, ASCII text data/genometools-1.6.1+ds/src/ltr/ltr_cluster_stream.c: C source, ASCII text data/genometools-1.6.1+ds/src/ltr/ltrdigest_strand_assign_visitor.h: C source, ASCII text data/genometools-1.6.1+ds/src/ltr/ltr_classify_stream.h: C source, ASCII text data/genometools-1.6.1+ds/src/ltr/gt_ltrdigest.h: C source, ASCII text data/genometools-1.6.1+ds/src/ltr/ltrdigest_file_out_stream.c: C source, ASCII text data/genometools-1.6.1+ds/src/gtt.h: C source, ASCII text data/genometools-1.6.1+ds/src/memcpy.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/mssufpat.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/test-mappedstr.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/rdj-ovlfind-bf.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/specialrank.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/sfx-suffixgetset.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/esa-mmsearch.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/randomcodes-tab.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/randomcodes.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/rdj-strgraph-edges-single-bitpack-def.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/sfx-outprj.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/esa-scanprj.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/esa-scanprj.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/rdj-spmfind.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/rdj-contigpaths.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/spmsuftab.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/spaced-seeds.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/sfx-mapped4.gen: C source, ASCII text data/genometools-1.6.1+ds/src/match/eis-headerid.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/hlk-version.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/rdj-contfinder.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/test-pairwise.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/reads_libraries_table.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/rdj-spmfind.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/eis-seqranges.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/seqnumrelpos.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/eis-encidxseq-siop.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/rdj-contfind-bottomup.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/eis-suffixarray-interface-priv.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/fmi-locate.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/xdrop.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/fmi-sufbwtstream.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/greedyfwdmat.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/kmer2string.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/encseq2offset.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/rdj-version.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/esa-splititv.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/eis-bwtseq-context-priv.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/eis-encidxseq-param.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/eis-seqblocktranslate.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/eis-bwtseq-construct.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/firstcodes-cache.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/rdj-ensure-output.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/rdj-twobitenc-editor.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/tyr-map.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/pckbucket.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/sfx-mappedstr.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/esa-bottomup-spmeq.inc: C source, ASCII text data/genometools-1.6.1+ds/src/match/fmi-sufbwtstream.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/gfa_writer.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/fmi-save.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/sfx-apfxlen.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/shu-dfs.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/firstcodes-accum.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/querymatch-align.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/randomcodes-correct.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/ft-polish.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/rdj-strgraph-edges-bitpack-def.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/marksubstring.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/diagbandseed.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/esa-map.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/karlin_altschul_stat.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/querymatch-align.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/fmi-map.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/rdj-strgraph-edges-bitfield-def.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/esa-bottomup-spmsk.inc: C source, ASCII text data/genometools-1.6.1+ds/src/match/ft-eoplist.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/seed_extend_parts.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/firstcodes-spacelog.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/firstcodes-spacelog.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/revcompl.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/declare-readfunc.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/bcktab.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/echoseq.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/eis-bwtseq-context-param.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/genomediff_opt.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/test-pairwise.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/emimergeesa.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/sfx-suftaborder.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/esa_lcpintervals_visitor.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/esa-fileend.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/idxlocali.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/test-mtrieins.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/esa-dfs.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/mssufpat.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/ft-trimstat.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/rdj-ovlfind-kmp.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/tyr-map.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/triangular_def.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/eis-bwtseq-extinfo.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/sfx-lwcheck.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/tyr-mkindex.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/eis-sequencemultiread.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/esa-spmitvs.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/eis-bwtseq-construct.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/firstcodes-cache.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/tyr-search.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/dist-short.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/esa-spmsk.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/substriter.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/shu-encseq-gc.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/revcompl.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/enum-patt.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/sfx-copysort.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/rdj-spmlist.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/pckbucket.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/esa-shulen.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/sfx-suftaborder.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/hlk-version.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/radixsort_str.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/ft-front-generation.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/rectangle-store.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/cutendpfx.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/esa-mmsearch.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/sfx-suffixer.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/esa-spmsk.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/dist-short.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/twobits2kmers.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/chainofin.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/myersapm.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/greedyedist.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/firstcodes.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/rdj-strgraph-counts-char-def.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/firstcodes-buf.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/iter-window.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/index_options.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/esa-minunique.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/seed-extend.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/tyr-occratio.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/eis-mrangealphabet.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/idxlocalidp.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/hashfirstcodes.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/ft-front-prune.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/merger-trie.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/eis-bwtseq-sass.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/esa-spmitvs.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/esa-bottomup-rdjce.inc: C source, ASCII text data/genometools-1.6.1+ds/src/match/eis-seqranges-priv.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/eis-bwtseq-siop.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/randomcodes-insert.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/seq_or_encseq.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/pck-count-nodes.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/rdj-contigs-graph.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/idxlocali.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/rdj-ovlfind-kmp.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/test-mergeesa.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/qsort-array.gen: C source, ASCII text data/genometools-1.6.1+ds/src/match/eis-bwtseq-context.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/sfx-maprange.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/iter-window.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/procmatch.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/reads2twobit.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/squarededist.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/asqg_writer.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/fmi-keyval.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/splititv.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/fmi-mkindex.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/esa-maxpairs.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/idxlocalisw.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/esa_lcpintervals_visitor.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/shu-genomediff.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/hplstore.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/sfx-enumcodes.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/rdj-pairwise.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/esa-splititv-simple.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/firstcodes-accum.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/lua_tools.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/seed-extend-iter.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/firstcodes-tab.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/apmeoveridx.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/eis-specialsrank-priv.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/echoseq.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/randomcodes-sfx-partssuf.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/chain2dim.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/lcpoverflow.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/tyr-occratio.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/fmi-occ.gen: C source, ASCII text data/genometools-1.6.1+ds/src/match/esa_spmitvs_visitor.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/tab-diffcover.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/shu-encseq-gc.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/shu-genomediff.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/seed-extend-params.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/eis-seqblocktranslate.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/sfx-radixsort.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/eis-suffixarray-interface.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/tagerator.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/fmi-map.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/test-maxpairs.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/randomcodes-hpcorrect.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/giextract.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/tyr-mersplit.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/pckdfs.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/fmi-save.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/esa-lcpintervals.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/eis-blockcomp-param.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/nullcols.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/firstcodes-psbuf.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/rdj-strgraph.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/sfx-sain.inc: C source, ASCII text data/genometools-1.6.1+ds/src/match/eis-seqdatasrc.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/sarr-def.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/seqnumrelpos.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/ft-trimstat.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/eis-blockcomp.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/esa-seqread.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/rdj-contigs-writer.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/fmi-mapspec.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/greedyfwdmat.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/rdj-strgraph-vertices-common-def.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/eis-sequencemultiread.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/firstcodes-insert.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/sfx-bentsedg.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/xdrop.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/queue-inline.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/radixsort_str.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/firstcodes-scan.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/rdj-pairwise.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/eis-sa-common-priv.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/initbasepower.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/absdfstrans-def.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/stamp.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/hashfirstcodes.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/cgr_spacedseed.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/absdfstrans-imp.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/esa-bottomup-spmvar.inc: C source, ASCII text data/genometools-1.6.1+ds/src/match/sfx-shortreadsort.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/tyr-basic.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/esa-minunique.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/esa-bottomup-shulen-RAM.inc: C source, ASCII text data/genometools-1.6.1+ds/src/match/firstcodes-psbuf.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/asqg_writer.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/firstcodes-tab.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/rdj-contigpaths.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/querymatch-display.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/diagband-struct.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/eis-specialsrank.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/sfx-lcpvalues.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/esa-seqread.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/fmi-fwduni.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/eis-bwtseq-sass.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/fmi-keyval.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/sfx-apfxlen.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/esa_visitor_rep.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/merger-trie.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/esa-splititv.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/twobits2kmers.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/eis-encidxseq-construct.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/esa-bottomup.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/fmindex.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/eis-bwtseq-context-param.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/bare-encseq.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/idx-limdfs.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/eis-seqranges.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/eis-encidxseq-param.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/eis-voiditf.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/eis-bwtseq.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/lcpinterval.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/querymatch.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/ft-eoplist.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/esa_visitor.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/eis-suffixarray-interface-siop.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/eis-voiditf.h: C source, UTF-8 Unicode text data/genometools-1.6.1+ds/src/match/esa-bottomup.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/randomcodes-sfx-partssuf.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/rdj-filesuf-def.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/reads_libraries_table.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/eis-bwtseq.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/eis-mrangealphabet-priv.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/ft-front-generation.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/rdj-contfinder.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/eis-random-seqaccess.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/seqabstract.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/tyr-mkindex.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/sfx-enumcodes.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/eis-mrangealphabet-siop.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/sfx-maprange.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/eis-encidxseq-construct.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/randomcodes-find-seldom.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/hplstore.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/firstcodes-insert.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/spaced-seeds.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/randomcodes-hpcorrect.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/eis-bwtseq-param.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/rdj-twobitenc-editor.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/eis-mrangealphabet.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/cutendpfx.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/prsqualint.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/extend-offset.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/myersapm.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/sfx-suffixgetset.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/initeqsvec.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/sfx-lcpvalues.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/spmsuftab.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/rdj-strgraph-edges-short-def.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/karlin_altschul_stat.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/sfx-linlcp.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/esa-dfs.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/shu_unitfile.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/dbs_spaced_seeds.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/fmi-fwduni.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/idxlocalidp.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/turnwheels.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/sfx-opt.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/seed-extend.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/pckdfs.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/sfx-partssuf.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/sfx-bltrie.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/optionargmode.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/initeqsvec.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/idx-limdfs.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/sfx-shortreadsort.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/index_options.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/eis-encidxseq.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/randomcodes-correct.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/firstcodes.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/querymatch-display.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/eis-bitpackseqpos.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/eis-bwtseq-context-siop.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/rdj-strgraph-vertices-bitpack-def.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/rdj-cntlist.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/sfx-run.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/test-maxpairs.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/seed-extend-iter.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/se-display.inc: ASCII text data/genometools-1.6.1+ds/src/match/pck-count-nodes.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/sfx-opt.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/qsort-inplace.gen: C source, ASCII text data/genometools-1.6.1+ds/src/match/querymatch.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/sfx-linlcp.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/rdj-ovlfind-dp.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/eis-suffixerator-interface.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/rdj-ovlfind-gusfield.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/randomcodes-tab.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/substriter.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/rectangle-store.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/prsqualint.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/test-mergeesa.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/rdj-version.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/chain2dim.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/esa-lcpintervals.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/eis-sa-common.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/eis-list-do.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/ft-polish.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/rdj-strgraph.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/sfx-copysort.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/esa-maxpairs.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/se-display-fwd.inc: ASCII text data/genometools-1.6.1+ds/src/match/eis-encidxseq-priv.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/lua_tools.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/esa-bottomup-shulen.inc: C source, ASCII text data/genometools-1.6.1+ds/src/match/esa-bottomup-rdjcv.inc: C source, ASCII text data/genometools-1.6.1+ds/src/match/esa-map.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/randomcodes-find-seldom.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/dataalign.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/idxlocalisw.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/firstcodes-scan.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/eis-blockcomp-construct.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/sfx-sain.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/eis-sa-common.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/reads2twobit.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/gfa_writer.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/cgr_spacedseed.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/rdj-ovlfind-bf.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/seqabstract.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/pssm.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/squarededist.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/ft-front-prune.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/rdj-ovlfind-dp.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/rdj-revcompl-def.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/eis-bwtseq-context.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/eis-encidxseq.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/eis-suffixarray-interface.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/randomcodes.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/sfx-mappedstr.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/shu-divergence.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/shu-dfs.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/enum-patt.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/rdj-cntlist.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/qgram2code.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/shu_unitfile.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/optionargmode.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/bare-encseq.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/sfx-nextchar.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/rdj-spmlist.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/intcode-def.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/tagerator.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/giextract.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/rdj-spmproc.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/esa-bottomup-errfind.inc: C source, ASCII text data/genometools-1.6.1+ds/src/match/sfx-suffixer.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/diagbandseed.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/eis-sa-common-siop.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/ft-longest-common.inc: ASCII text data/genometools-1.6.1+ds/src/match/rdj-contfind-def.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/rdj-contig-info.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/fmi-locate.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/test-mtrieins.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/esa-shulen.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/rdj-strgraph-vmark-def.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/tyr-show.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/eis-bwtseq-priv.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/encseq2offset.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/sfx-diffcov.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/sfx-radixsort.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/rdj-contigs-writer.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/rdj-contfind-bottomup.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/esa_spmitvs_visitor.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/eis-blockcomp-param.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/dbs_spaced_seeds.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/greedyedist.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/rdj-ovlfind-gusfield.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/esa-merge.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/esa_visitor.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/rdj-contigs-graph.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/seed_extend_parts.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/eis-specialsrank.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/tyr-mersplit.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/tyr-search.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/bcktab.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/sfx-lwcheck.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/sfx-outprj.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/turnwheels.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/initbasepower.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/sfx-partssuf.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/esa-bottomup-maxpairs.inc: C source, ASCII text data/genometools-1.6.1+ds/src/match/shu-divergence.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/rdj-spmproc.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/sfx-strategy.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/apmeoveridx.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/fmi-mapspec.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/fmi-mkindex.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/sfx-diffcov.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/diagband-struct.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/rdj-errfind.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/marksubstring.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/test-mappedstr.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/randomcodes-insert.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/kmer2string.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/eis-bwtseq-extinfo.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/eis-suffixerator-interface.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/rdj-errfind.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/eis-bwtseq-param.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/rdj-strgraph-vertices-bitfield-def.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/sfx-bltrie.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/kmercodes.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/sfx-bentsedg.c: C source, ASCII text data/genometools-1.6.1+ds/src/match/sfx-sain.h: C source, ASCII text data/genometools-1.6.1+ds/src/match/sfx-run.c: C source, ASCII text data/genometools-1.6.1+ds/src/lualib.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/splice_site_info_stream.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/gff3_linesorted_out_stream.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/seqpos_classifier.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/gff3_defines.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/match_blast_api.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/match_visitor_api.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/type_node.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/match_blast.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/match_iterator.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/feature_info.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/string_matching.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/match_open.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/dice_hmm.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/rdb_mysql.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/csa_stream.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/sam_alignment.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/region_node.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/cds_check_stream.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/alignment.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/blast_process_call.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/meta_node.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/feature_out_stream_api.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/rdb_visitor_api.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/feature_visitor.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/golomb.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/multi_sanitizer_visitor.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/feature_in_stream_api.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/maxcoordvalue.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/dup_feature_stream_api.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/ranked_list.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/select_visitor.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/select_stream.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/mutate.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/add_ids_visitor.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/dice_hmm.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/sampling.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/load_stream.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/wtree_rep.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/intset.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/gff3_out_stream_api.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/id_to_md5_stream_api.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/wtree.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/script_wrapper_visitor_api.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/transcript_evaluators.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/bed_in_stream.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/reconstructalignment.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/condenseq.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/add_ids_visitor.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/uniq_stream.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/sequence_node.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/feature_index_rep.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/sspliced_alignment_parsing.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/maxcoordvalue.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/swalign.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/seqpos_classifier.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/rbtree.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/rdb_visitor.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/splice_site_info_visitor.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/permute_words.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/dup_feature_visitor.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/fasta_header_iterator.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/uniq_stream_api.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/load_stream.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/gtdatahelp.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/intset_16.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/check_boundaries_visitor_api.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/match_iterator_sw.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/type_checker_builtin.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/compressed_bitsequence.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/collect_ids_visitor.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/tag_value_map.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/intset_rep.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/match_api.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/bed_parser.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/uint64hashtable_primes.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/stat_stream_api.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/clustered_set_uf.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/samfile_encseq_mapping.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/gff3_in_stream.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/rdb_sqlite.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/xrf_abbr_entry.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/md5set_primes_table.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/sequence_node_add_stream.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/encdesc.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/sampling.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/sspliced_alignment_parsing.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/csa_variable_strands.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/orf_iterator.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/cds_visitor.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/sort_stream.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/feature_node.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/stat_stream.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/shredder.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/type_checker_api.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/assembly_stats_calculator.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/typecheck_info.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/targetbest_select_stream.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/obo_stanza.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/cstr_iterator.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/match_iterator_open.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/csa_variable_strands.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/stat_visitor.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/mapping.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/sam_alignment.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/dup_feature_visitor.c: C source, ASCII text 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data/genometools-1.6.1+ds/src/extended/rcr.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/coin_hmm.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/encdesc_header_io.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/hcr.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/xrf_abbr_parse_tree.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/match_last.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/dot_out_stream.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/gtf_parser.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/xrf_abbr_parse_tree.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/bitoutstream.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/mapping.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/match_open.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/match_iterator_last.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/select_stream.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/chain_api.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/bed_parser.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/stat_visitor.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/regular_seqid.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/multieoplist.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/condenseq_search_arguments.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/gff3_in_stream_api.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/sequence_node_api.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/sequence_node_out_visitor.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/transcript_exons.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/transcript_used_exons.c: C source, ASCII text 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source, ASCII text data/genometools-1.6.1+ds/src/extended/compressed_bitsequence.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/csa_visitor.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/feature_node.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/script_wrapper_visitor.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/match_iterator_last.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/region_mapping.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/node_visitor.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/coin_hmm.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/uniq_stream.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/match_sw.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/match_rep.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/gff3_visitor_api.h: C source, ASCII text 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source, ASCII text data/genometools-1.6.1+ds/src/extended/condenseq.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/shredder.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/extract_feature_sequence.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/script_wrapper_visitor.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/orf_finder_stream.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/md5_to_id_stream_api.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/sort_stream_api.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/id_to_md5_visitor.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/typecheck_info.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/evaluator.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/array_in_stream.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/popcount_tab.c: C source, ASCII text 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data/genometools-1.6.1+ds/src/extended/kmer_database.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/gtf_out_stream_api.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/gff3_in_stream_plain.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/gtf_visitor.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/cds_visitor_api.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/sspliced_alignment.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/type_checker_obo.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/match_visitor.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/reverse_api.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/hcr.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/check_boundaries_visitor.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/feature_node_iterator_api.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/hmm.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/dot_visitor.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/luaserialize.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/tidy_region_node_visitor.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/luahelper.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/csa_splice_form.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/feature_stream.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/clustered_set_rep.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/csa_gene.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/aligned_segment.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/feature_in_stream.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/clustered_set.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/gff3_numsorted_out_stream.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/genome_node_api.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/obo_parse_tree.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/script_filter.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/spec_results.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/sequence_node_add_stream.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/type_graph.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/encdesc_rep.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/gff3_parser.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/anno_db_gfflike.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/golomb.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/consensus_sa_api.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/add_ids_stream.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/targetbest_select_stream.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/stream_evaluator.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/gtdatahelp.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/gff3_escaping_api.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/match_visitor.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/alignment.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/orf_finder_stream.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/squarealign.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/affinealign.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/encdesc_header_io.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/script_wrapper_stream.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/tidy_region_node_visitor.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/consensus_sa.c: C source, ASCII text 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data/genometools-1.6.1+ds/src/extended/tidy_region_node_stream.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/tir_stream.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/linearalign.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/tir_stream.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/merge_stream.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/snp_annotator_stream.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/hpol_processor.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/md5set.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/intset_32.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/transcript_counts.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/feature_index_memory.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/cds_stream.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/multieoplist.c: C source, ASCII 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data/genometools-1.6.1+ds/src/extended/csa_splice_form.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/feature_index.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/cds_stream_api.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/genome_node.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/collect_ids_visitor.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/xrfcheck_info.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/elias_gamma.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/feature_info.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/rmq.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/uint64hashtable.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/match_iterator_blast.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/gff3_escaping.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/orf_finder_visitor.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/array_in_stream_api.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/swalign.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/merge_feature_visitor.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/type_checker_rep.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/feature_in_stream.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/splicedseq.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/feature_node_observer.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/genome_node.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/chain.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/merge_feature_visitor.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/anno_db_schema.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/select_visitor.h: C source, ASCII text 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data/genometools-1.6.1+ds/src/extended/feature_index_memory_api.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/gff3_in_stream.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/script_wrapper_stream_api.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/gff3_parser.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/blast_process_call.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/snp_annotator_visitor.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/luaserialize.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/cds_check_stream.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/match_sw.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/bitinstream.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/ranked_list.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/match.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/match.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/match_blast.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/feature_node_api.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/linearalign_affinegapcost.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/gtf_parser.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/rmq.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/add_introns_stream.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/rdb_api.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/huffcode.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/feature_type_api.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/script_filter_api.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/gff3_in_stream_plain.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/obo_stanza.h: C source, ASCII text 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source, ASCII text data/genometools-1.6.1+ds/src/extended/intset_combined.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/csa_visitor.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/anno_db_schema_api.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/set_source_visitor.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/bed_in_stream.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/inter_feature_stream_api.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/match_last.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/extract_feature_stream.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/gtf_in_stream_api.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/squarealign.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/seqid2file.c: C source, ASCII text data/genometools-1.6.1+ds/src/extended/transcript_bittabs.h: C source, ASCII text 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source, ASCII text data/genometools-1.6.1+ds/src/extended/tag_value_map.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/anno_db_schema_rep.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/node_stream_api.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/md5_to_id_visitor.h: C source, ASCII text data/genometools-1.6.1+ds/src/extended/cds_check_visitor.h: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/text_width_calculator_cairo.h: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/element.h: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/text_width_calculator_rep.h: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/image_info.h: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/diagram.h: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/style.h: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/canvas.c: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/text_width_calculator.c: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/layout.c: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/color_api.h: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/feature_index_rep.h: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/canvas_cairo.c: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/gt_sketch.c: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/color.c: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/canvas_rep.h: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/style_api.h: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/diagram_api.h: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/image_info.c: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/text_width_calculator.h: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/rec_map.h: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/cliptype.h: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/canvas_api.h: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/graphics_cairo.h: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/feature_index_memory.h: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/line_breaker_bases.c: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/gt_sketch_page.c: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/coords.c: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/canvas_members.h: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/gt_sketch.h: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/custom_track_script_wrapper_api.h: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/block.h: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/custom_track_example.h: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/custom_track_example.c: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/line_breaker.c: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/line_breaker.h: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/custom_track_gc_content.h: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/drawing_range.c: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/custom_track.c: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/canvas_cairo_file_api.h: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/feature_index_api.h: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/text_width_calculator_cairo_api.h: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/custom_track_script_wrapper.h: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/layout_api.h: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/graphics_cairo.c: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/custom_track_rep.h: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/coords.h: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/line_breaker_rep.h: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/layout.h: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/graphics.c: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/custom_track_api.h: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/graphics.h: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/line.c: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/image_info_api.h: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/feature_index.h: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/custom_track_gc_content_api.h: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/luastyle.c: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/canvas_cairo_file.c: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/canvas_cairo_context_api.h: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/drawing_range.h: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/rec_map.c: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/style.c: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/feature_stream_api.h: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/canvas_cairo_context.h: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/graphics_api.h: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/block_api.h: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/line_breaker_captions.c: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/canvas_cairo_file.h: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/diagram.c: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/graphics_cairo_api.h: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/luastyle.h: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/track.h: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/gt_sketch_page.h: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/line_breaker_captions.h: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/feature_index_memory_api.h: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/default_formats.h: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/rec_map_api.h: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/canvas_cairo_context.c: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/custom_track_script_wrapper.c: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/line_breaker_bases.h: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/canvas.h: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/custom_track.h: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/line.h: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/block.c: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/track.c: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/text_width_calculator_api.h: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/custom_track_gc_content.c: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/graphics_rep.h: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/canvas_cairo.h: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/element.c: C source, ASCII text data/genometools-1.6.1+ds/src/annotationsketch/text_width_calculator_cairo.c: C source, ASCII text data/genometools-1.6.1+ds/src/gt.c: C source, ASCII text data/genometools-1.6.1+ds/src/core/bioseq_col.c: C source, ASCII text data/genometools-1.6.1+ds/src/core/minmax_api.h: C source, ASCII text data/genometools-1.6.1+ds/src/core/fasta.h: C source, ASCII text data/genometools-1.6.1+ds/src/core/bsearch_api.h: C source, ASCII text data/genometools-1.6.1+ds/src/core/array.c: C source, ASCII text data/genometools-1.6.1+ds/src/core/cstr_array_api.h: C source, ASCII text data/genometools-1.6.1+ds/src/core/encseq_charproc.gen: C source, ASCII text data/genometools-1.6.1+ds/src/core/fa_api.h: C source, ASCII text 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source, ASCII text data/genometools-1.6.1+ds/src/core/unit_testing.c: C source, ASCII text data/genometools-1.6.1+ds/src/core/version_api.h: C source, ASCII text data/genometools-1.6.1+ds/src/core/symbol.c: C source, ASCII text data/genometools-1.6.1+ds/src/core/orf.c: C source, ASCII text data/genometools-1.6.1+ds/src/core/init_api.h: C source, ASCII text data/genometools-1.6.1+ds/src/core/bioseq.c: C source, ASCII text data/genometools-1.6.1+ds/src/core/quality.c: C source, ASCII text data/genometools-1.6.1+ds/src/core/array2dim_sparse_api.h: C source, ASCII text data/genometools-1.6.1+ds/src/core/encseq_metadata.c: C source, ASCII text data/genometools-1.6.1+ds/src/core/tool_iterator.h: C source, ASCII text data/genometools-1.6.1+ds/src/core/chardef_api.h: C source, ASCII text data/genometools-1.6.1+ds/src/core/fasta_reader.c: C source, ASCII text data/genometools-1.6.1+ds/src/core/spacecalc.h: C source, ASCII text data/genometools-1.6.1+ds/src/core/queue_api.h: C source, ASCII text 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text data/genometools-1.6.1+ds/src/core/logger.h: C source, ASCII text data/genometools-1.6.1+ds/src/core/qsort-ulong.c: C source, ASCII text data/genometools-1.6.1+ds/src/core/accspecialrange.gen: C source, ASCII text data/genometools-1.6.1+ds/src/core/ulongbound.h: C source, ASCII text data/genometools-1.6.1+ds/src/core/cstr_array.c: C source, ASCII text data/genometools-1.6.1+ds/src/core/bioseq_col.h: C source, ASCII text data/genometools-1.6.1+ds/src/core/parseutils.h: C source, ASCII text data/genometools-1.6.1+ds/src/core/tokenizer.h: C source, ASCII text data/genometools-1.6.1+ds/src/core/bioseq_iterator.c: C source, ASCII text data/genometools-1.6.1+ds/src/core/bittab_api.h: C source, ASCII text data/genometools-1.6.1+ds/src/core/trans_table.c: C source, ASCII text data/genometools-1.6.1+ds/src/core/bittab.h: C source, ASCII text data/genometools-1.6.1+ds/src/core/xposix_api.h: C source, ASCII text data/genometools-1.6.1+ds/src/core/str_api.h: C source, ASCII text 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source, ASCII text data/genometools-1.6.1+ds/src/core/byte_popcount.c: C source, ASCII text data/genometools-1.6.1+ds/src/core/yarandom_api.h: C source, ASCII text data/genometools-1.6.1+ds/src/core/disc_distri.h: C source, ASCII text data/genometools-1.6.1+ds/src/core/radixsort-ip-flba.inc: ASCII text data/genometools-1.6.1+ds/src/core/msort_api.h: C source, ASCII text data/genometools-1.6.1+ds/src/core/gtdatapath.c: C source, ASCII text data/genometools-1.6.1+ds/src/core/parseutils_api.h: C source, ASCII text data/genometools-1.6.1+ds/src/core/sequence_buffer_fastq.c: C source, ASCII text data/genometools-1.6.1+ds/src/core/hashmap.c: C source, ASCII text data/genometools-1.6.1+ds/src/core/fasta_reader_rec.h: C source, ASCII text data/genometools-1.6.1+ds/src/core/bitpackstringop64.c: C source, ASCII text data/genometools-1.6.1+ds/src/core/sequence_buffer_fasta.c: C source, ASCII text data/genometools-1.6.1+ds/src/core/tool.c: C source, ASCII text 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