data/gfapy-1.1.0+dfsg/bin/gfapy-renumber: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/bin/gfapy-convert: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/bin/gfapy-diff: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/bin/gfapy-mergelinear: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/bin/gfapy-validate: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/doc/Makefile: ASCII text data/gfapy-1.1.0+dfsg/doc/tutorial/header.rst: ASCII text data/gfapy-1.1.0+dfsg/doc/tutorial/placeholders.rst: ASCII text data/gfapy-1.1.0+dfsg/doc/tutorial/positional_fields.rst: ASCII text data/gfapy-1.1.0+dfsg/doc/tutorial/rgfa.rst: ASCII text data/gfapy-1.1.0+dfsg/doc/tutorial/comments.rst: ASCII text data/gfapy-1.1.0+dfsg/doc/tutorial/gfa.rst: ASCII text data/gfapy-1.1.0+dfsg/doc/tutorial/alignments.rst: ASCII text data/gfapy-1.1.0+dfsg/doc/tutorial/positions.rst: ASCII text data/gfapy-1.1.0+dfsg/doc/tutorial/errors.rst: ASCII text data/gfapy-1.1.0+dfsg/doc/tutorial/graph_operations.rst: ASCII text data/gfapy-1.1.0+dfsg/doc/tutorial/custom_records.rst: UTF-8 Unicode text data/gfapy-1.1.0+dfsg/doc/tutorial/tags.rst: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/doc/tutorial/validation.rst: ASCII text data/gfapy-1.1.0+dfsg/doc/tutorial/references.rst: ASCII text data/gfapy-1.1.0+dfsg/doc/readme.rst: ASCII text data/gfapy-1.1.0+dfsg/doc/run_apidoc.sh: ASCII text data/gfapy-1.1.0+dfsg/doc/.gitignore: ASCII text data/gfapy-1.1.0+dfsg/doc/conf.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/doc/changelog.rst: ASCII text data/gfapy-1.1.0+dfsg/doc/index.rst: ASCII text data/gfapy-1.1.0+dfsg/setup.cfg: ASCII text data/gfapy-1.1.0+dfsg/tests/test_graphop_artifacts.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/tests/test_api_alignment.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/tests/test_api_positions.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/tests/test_unit_header.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/tests/test_api_placeholders.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/tests/test_api_lines_creators.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/tests/test_api_references_virtual.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/tests/test_unit_line_connection.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/tests/test_gfapy_line_segment.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/tests/test_internals_field_validator.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/tests/test_internals_field_parser.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/tests/test_unit_line.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/tests/test_api_lines_collections.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/tests/test_api_references_groups.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/tests/test_unit_symbol_invert.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/tests/test_api_lines_destructors.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/tests/test_gfapy_segment_references.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/tests/test_internals_field_writer.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/tests/test_api_custom_records.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/tests/test_unit_field_array.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/tests/test_gfapy_trace.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/tests/test_gfapy_line_edge.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/tests/test_gfapy_numeric_array.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/tests/test_api_rename_lines.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/tests/test_gfapy_line_link.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/tests/test_unit_oriented_line.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/tests/test_api_gfa2_lines.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/tests/test_api_comments.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/tests/test_api_version_conversion.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/tests/test_api_lines_finders.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/tests/test_gfapy_line_header.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/tests/test_unit_multiplication.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/tests/test_api_multiplication.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/tests/test_api_header.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/tests/test_unit_gfa_lines.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/tests/test_gfapy_sequence.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/tests/extension.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/tests/test_api_version.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/tests/test_api_positionals.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/tests/test_api_gfa_basics.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/tests/test_unit_unknown.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/tests/test_gfapy_line_version.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/tests/test_api_gfa1_lines.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/tests/test_api_linear_paths_extended.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/tests/test_unit_alignment.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/tests/test_api_references_f_g_lines.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/tests/test_api_extensions.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/tests/test_gfapy_alignment.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/tests/test_gfapy_line_path.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/tests/testdata/spec_q2.gfa2: ASCII text data/gfapy-1.1.0+dfsg/tests/testdata/linear_merging.4.gfa: ASCII text data/gfapy-1.1.0+dfsg/tests/testdata/rgfa_example.1.gfa: ASCII text data/gfapy-1.1.0+dfsg/tests/testdata/spec_q7.gfa2: ASCII text data/gfapy-1.1.0+dfsg/tests/testdata/two_components.gfa2: ASCII text data/gfapy-1.1.0+dfsg/tests/testdata/spec_q3.gfa2: ASCII text data/gfapy-1.1.0+dfsg/tests/testdata/links_distri.l2.m2.no_ld.gfa: ASCII text data/gfapy-1.1.0+dfsg/tests/testdata/links_distri.l2.m2.no_ld.gfa2: ASCII text data/gfapy-1.1.0+dfsg/tests/testdata/links_distri.l2.m3.no_ld.gfa2: ASCII text data/gfapy-1.1.0+dfsg/tests/testdata/spec_q2.gfa: ASCII text data/gfapy-1.1.0+dfsg/tests/testdata/copynum.2.gfa2: ASCII text data/gfapy-1.1.0+dfsg/tests/testdata/copynum.2.gfa: ASCII text data/gfapy-1.1.0+dfsg/tests/testdata/copynum.1.gfa2: ASCII text data/gfapy-1.1.0+dfsg/tests/testdata/links_distri.l2.m2.gfa2: ASCII text data/gfapy-1.1.0+dfsg/tests/testdata/links_distri.l1.m2.gfa2: ASCII text data/gfapy-1.1.0+dfsg/tests/testdata/loop.gfa2: ASCII text data/gfapy-1.1.0+dfsg/tests/testdata/linear_merging.5.gfa2: ASCII text data/gfapy-1.1.0+dfsg/tests/testdata/links_distri.l3.m2.gfa: ASCII text data/gfapy-1.1.0+dfsg/tests/testdata/example_from_spec2.gfa: ASCII text data/gfapy-1.1.0+dfsg/tests/testdata/spec_q5.gfa: ASCII text data/gfapy-1.1.0+dfsg/tests/testdata/links_distri.l2.m3.gfa: ASCII text data/gfapy-1.1.0+dfsg/tests/testdata/links_distri.l1.gfa: ASCII text data/gfapy-1.1.0+dfsg/tests/testdata/spec_q5.gfa2: ASCII text data/gfapy-1.1.0+dfsg/tests/testdata/gfa2_edges_classification.gfa: ASCII text data/gfapy-1.1.0+dfsg/tests/testdata/unnamed_and_named_links.gfa: ASCII text data/gfapy-1.1.0+dfsg/tests/testdata/example_from_spec2.gfa2: ASCII text data/gfapy-1.1.0+dfsg/tests/testdata/linear_merging.3.gfa: ASCII text data/gfapy-1.1.0+dfsg/tests/testdata/dead_ends.gfa: ASCII text data/gfapy-1.1.0+dfsg/tests/testdata/loop.gfa: ASCII text data/gfapy-1.1.0+dfsg/tests/testdata/linear_merging.2.gfa2: ASCII text data/gfapy-1.1.0+dfsg/tests/testdata/spec_q4.path_more_than_circular.seq: ASCII text data/gfapy-1.1.0+dfsg/tests/testdata/all_line_types.gfa1.gfa: ASCII text data/gfapy-1.1.0+dfsg/tests/testdata/copynum.1.gfa: ASCII text data/gfapy-1.1.0+dfsg/tests/testdata/spec_q1.gfa2: ASCII text data/gfapy-1.1.0+dfsg/tests/testdata/spec_q6.gfa2: ASCII text data/gfapy-1.1.0+dfsg/tests/testdata/spec_q4.gfa: ASCII text data/gfapy-1.1.0+dfsg/tests/testdata/two_components.gfa: ASCII text data/gfapy-1.1.0+dfsg/tests/testdata/links_distri.l3.m2.gfa2: ASCII text data/gfapy-1.1.0+dfsg/tests/testdata/spec_q7.gfa: ASCII text data/gfapy-1.1.0+dfsg/tests/testdata/links_distri.l3.m2.no_ld.gfa2: ASCII text data/gfapy-1.1.0+dfsg/tests/testdata/unnamed_link.gfa: ASCII text data/gfapy-1.1.0+dfsg/tests/testdata/spec_q4.gfa2: ASCII text data/gfapy-1.1.0+dfsg/tests/testdata/links_distri.l2.m3.no_ld.gfa: ASCII text data/gfapy-1.1.0+dfsg/tests/testdata/invalid/inconsistent_length.gfa1: ASCII text data/gfapy-1.1.0+dfsg/tests/testdata/invalid/edge_missing.gfa2: ASCII text data/gfapy-1.1.0+dfsg/tests/testdata/invalid/segment_missing.gfa1: ASCII text data/gfapy-1.1.0+dfsg/tests/testdata/invalid/edge_wrong_lastpos.gfa2: ASCII text data/gfapy-1.1.0+dfsg/tests/testdata/invalid/segment_missing.gfa2: ASCII text data/gfapy-1.1.0+dfsg/tests/testdata/invalid/fragment_wrong_lastpos.gfa2: ASCII text data/gfapy-1.1.0+dfsg/tests/testdata/invalid/link_missing.gfa1: ASCII text data/gfapy-1.1.0+dfsg/tests/testdata/links_distri.l3.gfa2: ASCII text data/gfapy-1.1.0+dfsg/tests/testdata/spec_q1.gfa: ASCII text data/gfapy-1.1.0+dfsg/tests/testdata/linear_merging.1.gfa2: ASCII text data/gfapy-1.1.0+dfsg/tests/testdata/spec_q2.path_circular.seq: ASCII text data/gfapy-1.1.0+dfsg/tests/testdata/links_distri.l2.gfa2: ASCII text data/gfapy-1.1.0+dfsg/tests/testdata/example1.gfa: ASCII text data/gfapy-1.1.0+dfsg/tests/testdata/spec_q2.path_linear.seq: ASCII text data/gfapy-1.1.0+dfsg/tests/testdata/linear_merging.2.gfa: ASCII text data/gfapy-1.1.0+dfsg/tests/testdata/spec_q3.gfa: ASCII text data/gfapy-1.1.0+dfsg/tests/testdata/links_distri.l3.m2.no_ld.gfa: ASCII text data/gfapy-1.1.0+dfsg/tests/testdata/example_from_spec.gfa2: ASCII text data/gfapy-1.1.0+dfsg/tests/testdata/example1.gfa2: ASCII text data/gfapy-1.1.0+dfsg/tests/testdata/links_distri.l2.m3.gfa2: ASCII text data/gfapy-1.1.0+dfsg/tests/testdata/links_distri.l1.m2.gfa: ASCII text data/gfapy-1.1.0+dfsg/tests/testdata/links_distri.l1.gfa2: ASCII text data/gfapy-1.1.0+dfsg/tests/testdata/rgfa_example.2.gfa: ASCII text data/gfapy-1.1.0+dfsg/tests/testdata/example_from_spec.gfa: ASCII text data/gfapy-1.1.0+dfsg/tests/testdata/sample.gfa2: ASCII text data/gfapy-1.1.0+dfsg/tests/testdata/links_distri.l2.gfa: ASCII text data/gfapy-1.1.0+dfsg/tests/testdata/links_distri.l3.gfa: ASCII text data/gfapy-1.1.0+dfsg/tests/testdata/all_line_types.gfa2.gfa: ASCII text data/gfapy-1.1.0+dfsg/tests/testdata/sample.gfa: ASCII text data/gfapy-1.1.0+dfsg/tests/testdata/dead_ends.gfa2: ASCII text data/gfapy-1.1.0+dfsg/tests/testdata/links_distri.l2.m2.gfa: ASCII text data/gfapy-1.1.0+dfsg/tests/testdata/spec_q6.gfa: ASCII text data/gfapy-1.1.0+dfsg/tests/testdata/example_from_spec.path14.seq: ASCII text data/gfapy-1.1.0+dfsg/tests/testdata/linear_merging.5.gfa: ASCII text data/gfapy-1.1.0+dfsg/tests/testdata/linear_merging.1.gfa: ASCII text data/gfapy-1.1.0+dfsg/tests/testdata/linear_merging.4.gfa2: ASCII text data/gfapy-1.1.0+dfsg/tests/testdata/linear_merging.3.gfa2: ASCII text data/gfapy-1.1.0+dfsg/tests/test_gfapy_cigar.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/tests/test_gfapy_line_containment.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/tests/test_unit_line_dynamic_fields.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/tests/test_api_rgfa.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/tests/test_graphop_copy_number.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/tests/test_api_tags.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/tests/test_unit_line_cloning.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/tests/test_gfapy_byte_array.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/tests/test_unit_line_equivalence.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/tests/test_unit_segment_end.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/tests/test_unit_lines_finders.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/tests/test_api_references_edge_gfa2.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/tests/__init__.py: empty data/gfapy-1.1.0+dfsg/tests/test_internals_tag_datatype.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/tests/test_api_references_edge_gfa1.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/tests/test_api_linear_paths.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/tests/test_unit_numeric_array.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/benchmarks/gfapy-reproduce-manuscript-figure.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/benchmarks/gfapy-profiler.sh: Bourne-Again shell script, ASCII text executable data/gfapy-1.1.0+dfsg/benchmarks/gfapy-plot-preparedata.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/benchmarks/gfapy-plot-benchmarkdata.R: a /usr/bin/env Rscript script, ASCII text executable data/gfapy-1.1.0+dfsg/benchmarks/gfapy-randomgraph: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/benchmarks/gfapy-run-benchmarks.sh: Bourne-Again shell script, ASCII text executable data/gfapy-1.1.0+dfsg/benchmarks/.gitignore: ASCII text data/gfapy-1.1.0+dfsg/benchmarks/gfapy-benchmark-collectdata: Bourne-Again shell script, ASCII text executable data/gfapy-1.1.0+dfsg/LICENSE.txt: ASCII text data/gfapy-1.1.0+dfsg/Makefile: ASCII text data/gfapy-1.1.0+dfsg/MANIFEST.in: ASCII text data/gfapy-1.1.0+dfsg/CHANGES.txt: ASCII text data/gfapy-1.1.0+dfsg/README.rst: ASCII text data/gfapy-1.1.0+dfsg/CONTRIBUTORS: ASCII text data/gfapy-1.1.0+dfsg/.gitignore: ASCII text data/gfapy-1.1.0+dfsg/setup.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/.travis.yml: ASCII text data/gfapy-1.1.0+dfsg/gfapy/alignment/placeholder.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/alignment/trace.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/alignment/alignment.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/alignment/cigar.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/alignment/__init__.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/lastpos.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/field/generic.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/field/optional_identifier_gfa2.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/field/position_gfa1.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/field/comment.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/field/path_name_gfa1.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/field/identifier_gfa2.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/field/oriented_identifier_gfa2.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/field/string.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/field/char.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/field/oriented_identifier_list_gfa2.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/field/field.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/field/integer.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/field/numeric_array.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/field/alignment_gfa2.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/field/optional_integer.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/field/position_gfa2.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/field/parser.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/field/json.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/field/alignment_list_gfa1.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/field/float.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/field/writer.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/field/custom_record_type.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/field/validator.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/field/oriented_identifier_list_gfa1.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/field/sequence_gfa1.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/field/orientation.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/field/segment_name_gfa1.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/field/identifier_list_gfa2.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/field/alignment_gfa1.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/field/byte_array.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/field/__init__.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/field/sequence_gfa2.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/custom_record/construction.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/custom_record/custom_record.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/custom_record/__init__.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/gap/references.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/gap/gap.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/gap/__init__.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/common/validate.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/common/cloning.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/common/field_datatype.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/common/construction.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/common/dynamic_fields.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/common/connection.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/common/equivalence.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/common/field_data.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/common/writer.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/common/virtual_to_real.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/common/update_references.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/common/version_conversion.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/common/__init__.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/common/default_record_definition.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/common/disconnection.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/segment/writer_wo_sequence.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/segment/coverage.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/segment/length_gfa1.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/segment/segment.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/segment/references.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/segment/gfa1.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/segment/gfa2.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/segment/gfa2_to_gfa1.py: ASCII text data/gfapy-1.1.0+dfsg/gfapy/line/segment/gfa1_to_gfa2.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/segment/__init__.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/edge/gfa1/alignment_type.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/edge/gfa1/references.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/edge/gfa1/to_gfa2.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/edge/gfa1/other.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/edge/gfa1/oriented_segments.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/edge/gfa1/__init__.py: empty data/gfapy-1.1.0+dfsg/gfapy/line/edge/containment/canonical.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/edge/containment/to_gfa2.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/edge/containment/pos.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/edge/containment/containment.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/edge/containment/__init__.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/edge/common/alignment_type.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/edge/common/from_to.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/edge/common/__init__.py: empty data/gfapy-1.1.0+dfsg/gfapy/line/edge/link/references.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/edge/link/link.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/edge/link/equivalence.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/edge/link/canonical.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/edge/link/to_gfa2.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/edge/link/complement.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/edge/link/__init__.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/edge/edge.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/edge/gfa2/validation.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/edge/gfa2/alignment_type.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/edge/gfa2/to_gfa1.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/edge/gfa2/references.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/edge/gfa2/other.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/edge/gfa2/gfa2.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/edge/gfa2/__init__.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/edge/__init__.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/line.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/fragment/validation.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/fragment/references.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/fragment/fragment.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/fragment/__init__.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/header/connection.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/header/field_data.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/header/version_conversion.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/header/multiline.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/header/header.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/header/__init__.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/group/group.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/group/gfa2/references.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/group/gfa2/same_id.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/group/gfa2/__init__.py: empty data/gfapy-1.1.0+dfsg/gfapy/line/group/path/validation.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/group/path/references.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/group/path/captured_path.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/group/path/to_gfa2.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/group/path/path.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/group/path/topology.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/group/path/__init__.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/group/ordered/ordered.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/group/ordered/to_gfa1.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/group/ordered/references.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/group/ordered/captured_path.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/group/ordered/__init__.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/group/unordered/induced_set.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/group/unordered/references.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/group/unordered/unordered.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/group/unordered/__init__.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/group/__init__.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/comment/comment.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/comment/tags.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/comment/construction.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/comment/writer.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/comment/version_conversion.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/comment/__init__.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/__init__.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/unknown/unknown.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/line/unknown/__init__.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/placeholder.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/segment_end.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/segment_end_path.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/numeric_array.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/logger.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/symbol_invert.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/gfa.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/sequence.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/oriented_line.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/lines/destructors.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/lines/headers.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/lines/lines.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/lines/collections.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/lines/creators.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/lines/__init__.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/lines/finders.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/field_array.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/rgfa.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/graph_operations/p_bubbles.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/graph_operations/artifacts.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/graph_operations/invertible_segments.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/graph_operations/redundant_linear_paths.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/graph_operations/linear_paths.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/graph_operations/copy_number.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/graph_operations/superfluous_links.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/graph_operations/multiplication.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/graph_operations/topology.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/graph_operations/__init__.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/graph_operations/graph_operations.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/error.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/byte_array.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/gfapy/__init__.py: Python script, ASCII text executable data/gfapy-1.1.0+dfsg/debian/changelog: ASCII text data/gfapy-1.1.0+dfsg/debian/control: ASCII text data/gfapy-1.1.0+dfsg/debian/copyright: UTF-8 Unicode text data/gfapy-1.1.0+dfsg/debian/lintian-overrides: ASCII text data/gfapy-1.1.0+dfsg/debian/man/gfapy-convert.1.txt: ASCII text data/gfapy-1.1.0+dfsg/debian/man/gfapy-mergelinear.1.txt: ASCII text data/gfapy-1.1.0+dfsg/debian/man/gfapy-validate.1.txt: ASCII text data/gfapy-1.1.0+dfsg/debian/manpages: ASCII text data/gfapy-1.1.0+dfsg/debian/rules: a /usr/bin/make -f script, ASCII text executable data/gfapy-1.1.0+dfsg/debian/source/format: ASCII text data/gfapy-1.1.0+dfsg/debian/tests/control: ASCII text data/gfapy-1.1.0+dfsg/debian/tests/test-example: POSIX shell script, ASCII text executable data/gfapy-1.1.0+dfsg/debian/upstream/metadata: ASCII text data/gfapy-1.1.0+dfsg/debian/watch: ASCII text data/gfapy-1.1.0+dfsg/.pc/.version: ASCII text data/gfapy-1.1.0+dfsg/.pc/.quilt_patches: ASCII text data/gfapy-1.1.0+dfsg/.pc/.quilt_series: ASCII text data/gfapy-1.1.0+dfsg/.pc/applied-patches: empty