Flawfinder version 2.0.10, (C) 2001-2019 David A. Wheeler. Number of rules (primarily dangerous function names) in C/C++ ruleset: 223 Examining data/ariba-2.14.6+ds/ariba/ext/minimap_ariba.cpp Examining data/ariba-2.14.6+ds/ariba/ext/vcfcall_ariba.cpp Examining data/ariba-2.14.6+ds/ariba/ext/fml-asm_ariba.cpp FINAL RESULTS: data/ariba-2.14.6+ds/ariba/ext/minimap_ariba.cpp:86:9: [2] (misc) open: Check when opening files - can an attacker redirect it (via symlinks), force the opening of special file type (e.g., device files), move things around to create a race condition, control its ancestors, or change its contents? (CWE-362). ofs.open(readsOutfile.c_str()); data/ariba-2.14.6+ds/ariba/ext/minimap_ariba.cpp:247:9: [2] (misc) open: Check when opening files - can an attacker redirect it (via symlinks), force the opening of special file type (e.g., device files), move things around to create a race condition, control its ancestors, or change its contents? (CWE-362). ifs.open(filename.c_str()); data/ariba-2.14.6+ds/ariba/ext/minimap_ariba.cpp:292:9: [2] (misc) open: Check when opening files - can an attacker redirect it (via symlinks), force the opening of special file type (e.g., device files), move things around to create a race condition, control its ancestors, or change its contents? (CWE-362). ofs.open(outfile.c_str()); data/ariba-2.14.6+ds/ariba/ext/minimap_ariba.cpp:311:9: [2] (misc) open: Check when opening files - can an attacker redirect it (via symlinks), force the opening of special file type (e.g., device files), move things around to create a race condition, control its ancestors, or change its contents? (CWE-362). ofs.open(outfile.c_str()); data/ariba-2.14.6+ds/ariba/ext/minimap_ariba.cpp:335:9: [2] (misc) open: Check when opening files - can an attacker redirect it (via symlinks), force the opening of special file type (e.g., device files), move things around to create a race condition, control its ancestors, or change its contents? (CWE-362). ofs.open(outfile.c_str()); data/ariba-2.14.6+ds/ariba/ext/minimap_ariba.cpp:354:9: [2] (misc) open: Check when opening files - can an attacker redirect it (via symlinks), force the opening of special file type (e.g., device files), move things around to create a race condition, control its ancestors, or change its contents? (CWE-362). ofs.open(outfile.c_str()); data/ariba-2.14.6+ds/ariba/ext/vcfcall_ariba.cpp:68:9: [2] (misc) open: Check when opening files - can an attacker redirect it (via symlinks), force the opening of special file type (e.g., device files), move things around to create a race condition, control its ancestors, or change its contents? (CWE-362). ofs.open(filename.c_str()); data/ariba-2.14.6+ds/ariba/ext/vcfcall_ariba.cpp:205:9: [2] (misc) open: Check when opening files - can an attacker redirect it (via symlinks), force the opening of special file type (e.g., device files), move things around to create a race condition, control its ancestors, or change its contents? (CWE-362). ifs.open(infile.c_str()); ANALYSIS SUMMARY: Hits = 8 Lines analyzed = 899 in approximately 0.11 seconds (8259 lines/second) Physical Source Lines of Code (SLOC) = 733 Hits@level = [0] 0 [1] 0 [2] 8 [3] 0 [4] 0 [5] 0 Hits@level+ = [0+] 8 [1+] 8 [2+] 8 [3+] 0 [4+] 0 [5+] 0 Hits/KSLOC@level+ = [0+] 10.9141 [1+] 10.9141 [2+] 10.9141 [3+] 0 [4+] 0 [5+] 0 Dot directories skipped = 1 (--followdotdir overrides) Minimum risk level = 1 Not every hit is necessarily a security vulnerability. There may be other security vulnerabilities; review your code! See 'Secure Programming HOWTO' (https://dwheeler.com/secure-programs) for more information.