Flawfinder version 2.0.10, (C) 2001-2019 David A. Wheeler.
Number of rules (primarily dangerous function names) in C/C++ ruleset: 223
Examining data/autodocksuite-4.2.6/autodock/PDBQT_tokens.h
Examining data/autodocksuite-4.2.6/autodock/alea.cc
Examining data/autodocksuite-4.2.6/autodock/alea.h
Examining data/autodocksuite-4.2.6/autodock/analysis.cc
Examining data/autodocksuite-4.2.6/autodock/analysis.h
Examining data/autodocksuite-4.2.6/autodock/autocomm.h
Examining data/autodocksuite-4.2.6/autodock/calculateEnergies.h
Examining data/autodocksuite-4.2.6/autodock/atom_parameter_manager.cc
Examining data/autodocksuite-4.2.6/autodock/atom_parameter_manager.h
Examining data/autodocksuite-4.2.6/autodock/autoglobal.h
Examining data/autodocksuite-4.2.6/autodock/banner.cc
Examining data/autodocksuite-4.2.6/autodock/banner.h
Examining data/autodocksuite-4.2.6/autodock/bestpdb.cc
Examining data/autodocksuite-4.2.6/autodock/bestpdb.h
Examining data/autodocksuite-4.2.6/autodock/com.cc
Examining data/autodocksuite-4.2.6/autodock/calculateEnergies.cc
Examining data/autodocksuite-4.2.6/autodock/call_cpso.cc
Examining data/autodocksuite-4.2.6/autodock/call_cpso.h
Examining data/autodocksuite-4.2.6/autodock/call_glss.cc
Examining data/autodocksuite-4.2.6/autodock/call_glss.h
Examining data/autodocksuite-4.2.6/autodock/call_gs.cc
Examining data/autodocksuite-4.2.6/autodock/call_gs.h
Examining data/autodocksuite-4.2.6/autodock/call_ls.cc
Examining data/autodocksuite-4.2.6/autodock/call_ls.h
Examining data/autodocksuite-4.2.6/autodock/center_ligand.cc
Examining data/autodocksuite-4.2.6/autodock/center_ligand.h
Examining data/autodocksuite-4.2.6/autodock/changeState.cc
Examining data/autodocksuite-4.2.6/autodock/changeState.h
Examining data/autodocksuite-4.2.6/autodock/check_header_float.cc
Examining data/autodocksuite-4.2.6/autodock/check_header_float.h
Examining data/autodocksuite-4.2.6/autodock/check_header_int.cc
Examining data/autodocksuite-4.2.6/autodock/check_header_int.h
Examining data/autodocksuite-4.2.6/autodock/check_header_line.cc
Examining data/autodocksuite-4.2.6/autodock/check_header_line.h
Examining data/autodocksuite-4.2.6/autodock/clmode.cc
Examining data/autodocksuite-4.2.6/autodock/clmode.h
Examining data/autodocksuite-4.2.6/autodock/cluster_analysis.cc
Examining data/autodocksuite-4.2.6/autodock/cluster_analysis.h
Examining data/autodocksuite-4.2.6/autodock/cnv_state_to_coords.cc
Examining data/autodocksuite-4.2.6/autodock/cnv_state_to_coords.h
Examining data/autodocksuite-4.2.6/autodock/coliny.cc
Examining data/autodocksuite-4.2.6/autodock/coliny.h
Examining data/autodocksuite-4.2.6/autodock/eval.cc
Examining data/autodocksuite-4.2.6/autodock/parse_PDBQT_line.cc
Examining data/autodocksuite-4.2.6/autodock/conformation_sampler.cc
Examining data/autodocksuite-4.2.6/autodock/conformation_sampler.h
Examining data/autodocksuite-4.2.6/autodock/constants.h
Examining data/autodocksuite-4.2.6/autodock/dimLibrary.cc
Examining data/autodocksuite-4.2.6/autodock/dimLibrary.h
Examining data/autodocksuite-4.2.6/autodock/distdepdiel.cc
Examining data/autodocksuite-4.2.6/autodock/distdepdiel.h
Examining data/autodocksuite-4.2.6/autodock/dpftoken.h
Examining data/autodocksuite-4.2.6/autodock/eintcal.cc
Examining data/autodocksuite-4.2.6/autodock/eintcal.h
Examining data/autodocksuite-4.2.6/autodock/eintcalPrint.cc
Examining data/autodocksuite-4.2.6/autodock/eintcalPrint.h
Examining data/autodocksuite-4.2.6/autodock/energy.h
Examining data/autodocksuite-4.2.6/autodock/eval.h
Examining data/autodocksuite-4.2.6/autodock/gencau.cc
Examining data/autodocksuite-4.2.6/autodock/gencau.h
Examining data/autodocksuite-4.2.6/autodock/getInitialState.cc
Examining data/autodocksuite-4.2.6/autodock/getInitialState.h
Examining data/autodocksuite-4.2.6/autodock/get_atom_type.cc
Examining data/autodocksuite-4.2.6/autodock/get_atom_type.h
Examining data/autodocksuite-4.2.6/autodock/getpdbcrds.cc
Examining data/autodocksuite-4.2.6/autodock/getpdbcrds.h
Examining data/autodocksuite-4.2.6/autodock/getrms.cc
Examining data/autodocksuite-4.2.6/autodock/getrms.h
Examining data/autodocksuite-4.2.6/autodock/globals.h
Examining data/autodocksuite-4.2.6/autodock/grid.h
Examining data/autodocksuite-4.2.6/autodock/gs.cc
Examining data/autodocksuite-4.2.6/autodock/gs.h
Examining data/autodocksuite-4.2.6/autodock/hybrids.h
Examining data/autodocksuite-4.2.6/autodock/initautodock.cc
Examining data/autodocksuite-4.2.6/autodock/initautodock.h
Examining data/autodocksuite-4.2.6/autodock/input_state.cc
Examining data/autodocksuite-4.2.6/autodock/input_state.h
Examining data/autodocksuite-4.2.6/autodock/intnbtable.cc
Examining data/autodocksuite-4.2.6/autodock/intnbtable.h
Examining data/autodocksuite-4.2.6/autodock/investigate.cc
Examining data/autodocksuite-4.2.6/autodock/investigate.h
Examining data/autodocksuite-4.2.6/autodock/linpack.cc
Examining data/autodocksuite-4.2.6/autodock/ls.cc
Examining data/autodocksuite-4.2.6/autodock/ls.h
Examining data/autodocksuite-4.2.6/autodock/main.cc
Examining data/autodocksuite-4.2.6/autodock/main.h
Examining data/autodocksuite-4.2.6/autodock/map_declare.h
Examining data/autodocksuite-4.2.6/autodock/mdist.h
Examining data/autodocksuite-4.2.6/autodock/mapping.cc
Examining data/autodocksuite-4.2.6/autodock/mingw_getrusage.cc
Examining data/autodocksuite-4.2.6/autodock/mingw_sys_times.h
Examining data/autodocksuite-4.2.6/autodock/mingw_sysconf.h
Examining data/autodocksuite-4.2.6/autodock/minmeanmax.cc
Examining data/autodocksuite-4.2.6/autodock/mkNewState.cc
Examining data/autodocksuite-4.2.6/autodock/mkNewState.h
Examining data/autodocksuite-4.2.6/autodock/mkRandomState.cc
Examining data/autodocksuite-4.2.6/autodock/mkRandomState.h
Examining data/autodocksuite-4.2.6/autodock/mkTorTree.cc
Examining data/autodocksuite-4.2.6/autodock/mkTorTree.h
Examining data/autodocksuite-4.2.6/autodock/nbe.cc
Examining data/autodocksuite-4.2.6/autodock/nbe.h
Examining data/autodocksuite-4.2.6/autodock/nonbonds.cc
Examining data/autodocksuite-4.2.6/autodock/nonbonds.h
Examining data/autodocksuite-4.2.6/autodock/openfile.cc
Examining data/autodocksuite-4.2.6/autodock/openfile.h
Examining data/autodocksuite-4.2.6/autodock/output_state.cc
Examining data/autodocksuite-4.2.6/autodock/output_state.h
Examining data/autodocksuite-4.2.6/autodock/partokens.h
Examining data/autodocksuite-4.2.6/autodock/parameters.h
Examining data/autodocksuite-4.2.6/autodock/parse_param_line.cc
Examining data/autodocksuite-4.2.6/autodock/parse_PDBQT_line.h
Examining data/autodocksuite-4.2.6/autodock/parse_dpf_line.cc
Examining data/autodocksuite-4.2.6/autodock/parse_dpf_line.h
Examining data/autodocksuite-4.2.6/autodock/print_atomic_energies.h
Examining data/autodocksuite-4.2.6/autodock/parse_param_line.h
Examining data/autodocksuite-4.2.6/autodock/parse_trj_line.cc
Examining data/autodocksuite-4.2.6/autodock/parse_trj_line.h
Examining data/autodocksuite-4.2.6/autodock/parsetypes.cc
Examining data/autodocksuite-4.2.6/autodock/parsetypes.h
Examining data/autodocksuite-4.2.6/autodock/prClusterHist.cc
Examining data/autodocksuite-4.2.6/autodock/prClusterHist.h
Examining data/autodocksuite-4.2.6/autodock/prInitialState.cc
Examining data/autodocksuite-4.2.6/autodock/prInitialState.h
Examining data/autodocksuite-4.2.6/autodock/prTorConList.cc
Examining data/autodocksuite-4.2.6/autodock/prTorConList.h
Examining data/autodocksuite-4.2.6/autodock/printEnergies.cc
Examining data/autodocksuite-4.2.6/autodock/printEnergies.h
Examining data/autodocksuite-4.2.6/autodock/print_2x.cc
Examining data/autodocksuite-4.2.6/autodock/print_2x.h
Examining data/autodocksuite-4.2.6/autodock/qmultiply.h
Examining data/autodocksuite-4.2.6/autodock/pso.cc
Examining data/autodocksuite-4.2.6/autodock/print_atomic_energies.cc
Examining data/autodocksuite-4.2.6/autodock/print_avsfld.cc
Examining data/autodocksuite-4.2.6/autodock/print_avsfld.h
Examining data/autodocksuite-4.2.6/autodock/print_rem.cc
Examining data/autodocksuite-4.2.6/autodock/print_rem.h
Examining data/autodocksuite-4.2.6/autodock/printdate.cc
Examining data/autodocksuite-4.2.6/autodock/printdate.h
Examining data/autodocksuite-4.2.6/autodock/printhms.cc
Examining data/autodocksuite-4.2.6/autodock/printhms.h
Examining data/autodocksuite-4.2.6/autodock/pso.h
Examining data/autodocksuite-4.2.6/autodock/rep_constants.h
Examining data/autodocksuite-4.2.6/autodock/qmultiply.cc
Examining data/autodocksuite-4.2.6/autodock/qtransform.cc
Examining data/autodocksuite-4.2.6/autodock/qtransform.h
Examining data/autodocksuite-4.2.6/autodock/quicksort.cc
Examining data/autodocksuite-4.2.6/autodock/quicksort.h
Examining data/autodocksuite-4.2.6/autodock/ranlib.cc
Examining data/autodocksuite-4.2.6/autodock/ranlib.h
Examining data/autodocksuite-4.2.6/autodock/readPDBQT.cc
Examining data/autodocksuite-4.2.6/autodock/readPDBQT.h
Examining data/autodocksuite-4.2.6/autodock/readfield.cc
Examining data/autodocksuite-4.2.6/autodock/rep.cc
Examining data/autodocksuite-4.2.6/autodock/read_parameter_library.cc
Examining data/autodocksuite-4.2.6/autodock/read_parameter_library.h
Examining data/autodocksuite-4.2.6/autodock/readfield.h
Examining data/autodocksuite-4.2.6/autodock/readmap.cc
Examining data/autodocksuite-4.2.6/autodock/readmap.h
Examining data/autodocksuite-4.2.6/autodock/rep.h
Examining data/autodocksuite-4.2.6/autodock/setflags.cc
Examining data/autodocksuite-4.2.6/autodock/scauchy.cc
Examining data/autodocksuite-4.2.6/autodock/stateLibrary.cc
Examining data/autodocksuite-4.2.6/autodock/setflags.h
Examining data/autodocksuite-4.2.6/autodock/simanneal.cc
Examining data/autodocksuite-4.2.6/autodock/simanneal.h
Examining data/autodocksuite-4.2.6/autodock/sort_enrg.cc
Examining data/autodocksuite-4.2.6/autodock/sort_enrg.h
Examining data/autodocksuite-4.2.6/autodock/stack.cc
Examining data/autodocksuite-4.2.6/autodock/stack.h
Examining data/autodocksuite-4.2.6/autodock/stateLibrary.h
Examining data/autodocksuite-4.2.6/autodock/stop.cc
Examining data/autodocksuite-4.2.6/autodock/stop.h
Examining data/autodocksuite-4.2.6/autodock/warn_bad_file.h
Examining data/autodocksuite-4.2.6/autodock/usage.h
Examining data/autodocksuite-4.2.6/autodock/strindex.cc
Examining data/autodocksuite-4.2.6/autodock/strindex.h
Examining data/autodocksuite-4.2.6/autodock/structs.h
Examining data/autodocksuite-4.2.6/autodock/success.cc
Examining data/autodocksuite-4.2.6/autodock/success.h
Examining data/autodocksuite-4.2.6/autodock/support.cc
Examining data/autodocksuite-4.2.6/autodock/support.h