=========================================================== .___ __ __ _________________ __ __ __| _/|__|/ |_ / ___\_` __ \__ \ | | \/ __ | | \\_ __\ / /_/ > | \// __ \| | / /_/ | | || | \___ /|__| (____ /____/\____ | |__||__| /_____/ \/ \/ grep rough audit - static analysis tool v2.8 written by @Wireghoul =================================[justanotherhacker.com]=== ############################################## gemma-0.98.1+dfsg/test/dev_test_suite.sh-17- outfn=output/mouse_hs1940_CD8_lm.assoc.txt gemma-0.98.1+dfsg/test/dev_test_suite.sh:18: assertEquals "118459" `wc -w < $outfn` gemma-0.98.1+dfsg/test/dev_test_suite.sh:19: assertEquals "4053667109.69" `perl -nle 'foreach $x (split(/\s+/,$_)) { $sum += sprintf("%.2f",(substr($x,,0,6))) } END { printf "%.2f",$sum }' $outfn` gemma-0.98.1+dfsg/test/dev_test_suite.sh-20-} ############################################## gemma-0.98.1+dfsg/test/dev_test_suite.sh-47- outfn=output/$outn.cXX.txt gemma-0.98.1+dfsg/test/dev_test_suite.sh:48: assertEquals "198" `wc -l < $outfn` gemma-0.98.1+dfsg/test/dev_test_suite.sh:49: assertEquals "-116.11" `perl -nle 'foreach $x (split(/\s+/,$_)) { $sum += sprintf("%.2f",(substr($x,,0,6))) } END { printf "%.2f",$sum }' $outfn` gemma-0.98.1+dfsg/test/dev_test_suite.sh-50-} ############################################## gemma-0.98.1+dfsg/test/dev_test_suite.sh-63- outfn=output/$outn.assoc.txt gemma-0.98.1+dfsg/test/dev_test_suite.sh:64: assertEquals "95134" `wc -w < $outfn` gemma-0.98.1+dfsg/test/dev_test_suite.sh:65: assertEquals "3089042886.28" `perl -nle 'foreach $x (split(/\s+/,$_)) { $sum += sprintf("%.2f",(substr($x,,0,6))) } END { printf "%.2f",$sum }' $outfn` gemma-0.98.1+dfsg/test/dev_test_suite.sh-66-} ############################################## gemma-0.98.1+dfsg/test/dev_test_suite.sh-79- outfn=output/$outn.assoc.txt gemma-0.98.1+dfsg/test/dev_test_suite.sh:80: assertEquals "73180" `wc -w < $outfn` gemma-0.98.1+dfsg/test/dev_test_suite.sh:81: assertEquals "3088458212.93" `perl -nle 'foreach $x (split(/\s+/,$_)) { $sum += sprintf("%.2f",(substr($x,,0,6))) } END { printf "%.2f",$sum }' $outfn` gemma-0.98.1+dfsg/test/dev_test_suite.sh-82-} ############################################## gemma-0.98.1+dfsg/test/dev_test_suite.sh-89- outfn=output/$outn.cXX.txt gemma-0.98.1+dfsg/test/dev_test_suite.sh:90: assertEquals "193.80" `perl -nle 'foreach $x (split(/\s+/,$_)) { $sum += sprintf("%.2f",(substr($x,,0,6))) } END { printf "%.2f",$sum }' $outfn` gemma-0.98.1+dfsg/test/dev_test_suite.sh-91-} ############################################## gemma-0.98.1+dfsg/test/dev_test_suite.sh-97- outfn=output/$outn.assoc.txt gemma-0.98.1+dfsg/test/dev_test_suite.sh:98: assertEquals "338154001.76" `perl -nle 'foreach $x (split(/\s+/,$_)) { $sum += sprintf("%.2f",(substr($x,,0,6))) } END { printf "%.2f",$sum }' $outfn` gemma-0.98.1+dfsg/test/dev_test_suite.sh-99-} ############################################## gemma-0.98.1+dfsg/test/dev_test_suite.sh-109- assertEquals 0 $? gemma-0.98.1+dfsg/test/dev_test_suite.sh:110: assertEquals "400" `wc -l < $outfn` gemma-0.98.1+dfsg/test/dev_test_suite.sh:111: assertEquals "0.312" `head -c 5 $outfn` gemma-0.98.1+dfsg/test/dev_test_suite.sh:112: assertEquals "71.03" `perl -nle 'foreach $x (split(/\s+/,$_)) { $sum += sprintf("%.2f",(substr($x,,0,6))) } END { printf "%.2f",$sum }' $outfn` gemma-0.98.1+dfsg/test/dev_test_suite.sh-113-} ############################################## gemma-0.98.1+dfsg/test/dev_test_suite.sh-130- outfn=output/$outn.assoc.txt gemma-0.98.1+dfsg/test/dev_test_suite.sh:131: assertEquals "68" `wc -l < $outfn` gemma-0.98.1+dfsg/test/dev_test_suite.sh:132: assertEquals "15465346.22" `perl -nle 'foreach $x (split(/\s+/,$_)) { $sum += sprintf("%.2f",(substr($x,,0,6))) } END { printf "%.2f",$sum }' $outfn` gemma-0.98.1+dfsg/test/dev_test_suite.sh-133-} ############################################## gemma-0.98.1+dfsg/test/dev_test_suite.sh-149- assertEquals 0 $? gemma-0.98.1+dfsg/test/dev_test_suite.sh:150: assertEquals "400" `wc -l < $outfn` gemma-0.98.1+dfsg/test/dev_test_suite.sh:151: assertEquals "0.312" `head -c 5 $outfn` gemma-0.98.1+dfsg/test/dev_test_suite.sh:152: assertEquals "71.03" `perl -nle 'foreach $x (split(/\s+/,$_)) { $sum += sprintf("%.2f",(substr($x,,0,6))) } END { printf "%.2f",$sum }' $outfn` gemma-0.98.1+dfsg/test/dev_test_suite.sh-153-} ############################################## gemma-0.98.1+dfsg/test/dev_test_suite.sh-171- outfn=output/$outn.assoc.txt gemma-0.98.1+dfsg/test/dev_test_suite.sh:172: assertEquals "68" `wc -l < $outfn` gemma-0.98.1+dfsg/test/dev_test_suite.sh:173: assertEquals "15465346.22" `perl -nle 'foreach $x (split(/\s+/,$_)) { $sum += sprintf("%.2f",(substr($x,,0,6))) } END { printf "%.2f",$sum }' $outfn` gemma-0.98.1+dfsg/test/dev_test_suite.sh-174-} ############################################## gemma-0.98.1+dfsg/test/dev_test_suite.sh-186- outfn=output/$outn.assoc.txt gemma-0.98.1+dfsg/test/dev_test_suite.sh:187: assertEquals "101" `wc -l < $outfn` gemma-0.98.1+dfsg/test/dev_test_suite.sh:188: # assertEquals "777.32" `perl -nle 'foreach $x (split(/\s+/,$_)) { $sum += sprintf("%.2f",(substr($x,,0,6))) } END { printf "%.2f",$sum }' $outfn` gemma-0.98.1+dfsg/test/dev_test_suite.sh-189-} ############################################## gemma-0.98.1+dfsg/test/lengthy_test_suite.sh-15- assertEquals 0 $? gemma-0.98.1+dfsg/test/lengthy_test_suite.sh:16: assertEquals "427" `wc -l < $outfn` gemma-0.98.1+dfsg/test/lengthy_test_suite.sh:17: assertEquals "-358.07" `perl -nle 'foreach $x (split(/\s+/,$_)) { $sum += sprintf("%.2f",(substr($x,,0,6))) } END { printf "%.2f",$sum }' $outfn` gemma-0.98.1+dfsg/test/lengthy_test_suite.sh-18-} ############################################## gemma-0.98.1+dfsg/test/lengthy_test_suite.sh-40- outfn=output/$testname.assoc.txt gemma-0.98.1+dfsg/test/lengthy_test_suite.sh:41: assertEquals "223243" `wc -l < $outfn` gemma-0.98.1+dfsg/test/lengthy_test_suite.sh:42: assertEquals "89754977983.69" `perl -nle 'foreach $x (split(/\s+/,$_)) { $sum += sprintf("%.2f",(substr($x,,0,6))) } END { printf "%.2f",$sum }' $outfn` gemma-0.98.1+dfsg/test/lengthy_test_suite.sh-43-} ############################################## gemma-0.98.1+dfsg/test/test_suite.sh-15- outfn2=output/$outn.param.txt gemma-0.98.1+dfsg/test/test_suite.sh:16: # assertEquals "45181" `perl -nle 'foreach $x (split(/\s+/,$_)) { $sum += sprintf("%.0f",(substr($x,,0,6))) } END { printf "%.0f",$sum }' $outfn1` gemma-0.98.1+dfsg/test/test_suite.sh:17: # assertEquals "4043967139.42" `perl -nle 'foreach $x (split(/\s+/,$_)) { $sum += sprintf("%.2f",(substr($x,,0,6))) } END { printf "%.2f",$sum }' $outfn2` gemma-0.98.1+dfsg/test/test_suite.sh-18-} ############################################## gemma-0.98.1+dfsg/test/test_suite.sh-28- outfn=output/$outn.cXX.txt gemma-0.98.1+dfsg/test/test_suite.sh:29: assertEquals "579.66" `perl -nle 'foreach $x (split(/\s+/,$_)) { $sum += sprintf("%.2f",(substr($x,,0,6))) } END { printf "%.2f",$sum }' $outfn` gemma-0.98.1+dfsg/test/test_suite.sh-30-} ############################################## gemma-0.98.1+dfsg/test/test_suite.sh-44- outfn=output/$outn.hyp.txt gemma-0.98.1+dfsg/test/test_suite.sh:45: # assertEquals "291" `perl -nle 'foreach $x (split(/\s+/,$_)) { $sum += sprintf("%.0f",(substr($x,,0,6))) } END { printf "%.0f",100*$sum }' $outfn` gemma-0.98.1+dfsg/test/test_suite.sh-46-} ############################################## gemma-0.98.1+dfsg/test/test_suite.sh-60- outfn=output/$outn.prdt.txt gemma-0.98.1+dfsg/test/test_suite.sh:61: # assertEquals "-60.33" `perl -nle 'foreach $x (split(/\s+/,$_)) { $sum += sprintf("%.2f",(substr($x,,0,6))) } END { printf "%.2f",$sum }' $outfn` gemma-0.98.1+dfsg/test/test_suite.sh-62-} ############################################## gemma-0.98.1+dfsg/test/test_suite.sh-77- outfn=output/$outn.prdt.txt gemma-0.98.1+dfsg/test/test_suite.sh:78: assertEquals "550.67" `perl -nle 'foreach $x (split(/\s+/,$_)) { $sum += sprintf("%.2f",(substr($x,,0,6))) } END { printf "%.2f",$sum }' $outfn` gemma-0.98.1+dfsg/test/test_suite.sh-79-} ############################################## gemma-0.98.1+dfsg/test/test_suite.sh-88- outfn=output/$outn.cXX.txt gemma-0.98.1+dfsg/test/test_suite.sh:89: assertEquals "1940" `wc -l < $outfn` gemma-0.98.1+dfsg/test/test_suite.sh:90: assertEquals "2246.57" `perl -nle 'foreach $x (split(/\s+/,$_)) { $sum += sprintf("%.2f",(substr($x,,0,6))) } END { printf "%.2f",$sum }' $outfn` gemma-0.98.1+dfsg/test/test_suite.sh-91-} ############################################## gemma-0.98.1+dfsg/test/test_suite.sh-106- outfn=output/$outn.assoc.txt gemma-0.98.1+dfsg/test/test_suite.sh:107: assertEquals "951" `wc -l < $outfn` gemma-0.98.1+dfsg/test/test_suite.sh:108: assertEquals "267507851.98" `perl -nle 'foreach $x (split(/\s+/,$_)) { $sum += sprintf("%.2f",(substr($x,,0,6))) } END { printf "%.2f",$sum }' $outfn` gemma-0.98.1+dfsg/test/test_suite.sh-109-} ############################################## gemma-0.98.1+dfsg/test/test_suite.sh-116- outfn=output/mouse_hs1940.cXX.txt gemma-0.98.1+dfsg/test/test_suite.sh:117: assertEquals "1940" `wc -l < $outfn` gemma-0.98.1+dfsg/test/test_suite.sh:118: assertEquals "3763600" `wc -w < $outfn` gemma-0.98.1+dfsg/test/test_suite.sh:119: assertEquals "0.335" `head -c 5 $outfn` gemma-0.98.1+dfsg/test/test_suite.sh:120: assertEquals "1119.64" `perl -nle 'foreach $x (split(/\s+/,$_)) { $sum += sprintf("%.2f",(substr($x,,0,6))) } END { printf "%.2f",$sum }' $outfn` gemma-0.98.1+dfsg/test/test_suite.sh-121-} ############################################## gemma-0.98.1+dfsg/test/test_suite.sh-134- outfn=output/mouse_hs1940_CD8_lmm.assoc.txt gemma-0.98.1+dfsg/test/test_suite.sh:135: assertEquals "129228" `wc -w < $outfn` gemma-0.98.1+dfsg/test/test_suite.sh:136: assertEquals "4038540440.86" `perl -nle 'foreach $x (split(/\s+/,$_)) { $sum += sprintf("%.2f",(substr($x,,0,6))) } END { printf "%.2f",$sum }' $outfn` gemma-0.98.1+dfsg/test/test_suite.sh-137-} ############################################## gemma-0.98.1+dfsg/test/test_suite.sh-149- outfn=output/mouse_hs1940_CD8MCH_lmm.assoc.txt gemma-0.98.1+dfsg/test/test_suite.sh:150: assertEquals "139867" `wc -w < $outfn` gemma-0.98.1+dfsg/test/test_suite.sh:151: assertEquals "4029037056.54" `perl -nle 'foreach $x (split(/\s+/,$_)) { $sum += sprintf("%.2f",(substr($x,,0,6))) } END { printf "%.2f",$sum }' $outfn` gemma-0.98.1+dfsg/test/test_suite.sh-152-} ############################################## gemma-0.98.1+dfsg/test/test_suite.sh-161- assertEquals 0 $? gemma-0.98.1+dfsg/test/test_suite.sh:162: assertEquals "427" `wc -l < $outfn` gemma-0.98.1+dfsg/test/test_suite.sh:163: assertEquals "-358.07" `perl -nle 'foreach $x (split(/\s+/,$_)) { $sum += sprintf("%.2f",(substr($x,,0,6))) } END { printf "%.2f",$sum }' $outfn` gemma-0.98.1+dfsg/test/test_suite.sh-164-} ############################################## gemma-0.98.1+dfsg/test/test_suite.sh-179- outfn=output/$testname.assoc.txt gemma-0.98.1+dfsg/test/test_suite.sh:180: assertEquals "223243" `wc -l < $outfn` gemma-0.98.1+dfsg/test/test_suite.sh:181: assertEquals "89757159113.77" `perl -nle 'foreach $x (split(/\s+/,$_)) { $sum += sprintf("%.2f",(substr($x,,0,6))) } END { printf "%.2f",$sum }' $outfn` gemma-0.98.1+dfsg/test/test_suite.sh-182-} ############################################## gemma-0.98.1+dfsg/debian/tests/run-sample-analysis-5-if [ "$AUTOPKGTEST_TMP" = "" ] ; then gemma-0.98.1+dfsg/debian/tests/run-sample-analysis:6: AUTOPKGTEST_TMP=`mktemp -d /tmp/${pkg}-test.XXXXXX` gemma-0.98.1+dfsg/debian/tests/run-sample-analysis-7-fi