data/artemis-18.1.0+dfsg/CHANGELOG.md:69: seperate ==> separate
data/artemis-18.1.0+dfsg/CHANGELOG.md:76: buil ==> build, built
data/artemis-18.1.0+dfsg/CHANGELOG.md:347: windos ==> windows
data/artemis-18.1.0+dfsg/CHANGELOG.md:361: compatability ==> compatibility
data/artemis-18.1.0+dfsg/Historic_ChangeLog:28: HDA ==> HAD
data/artemis-18.1.0+dfsg/Historic_ChangeLog:487: writting ==> writing
data/artemis-18.1.0+dfsg/etc/af063097.embl:62: Calender ==> Calendar
data/artemis-18.1.0+dfsg/etc/go_associations.pl:43: uncorrect ==> incorrect
data/artemis-18.1.0+dfsg/etc/options:20: possibilites ==> possibilities
data/artemis-18.1.0+dfsg/etc/qualifier_types:28: heterogenous ==> heterogeneous
data/artemis-18.1.0+dfsg/etc/readmeDNADraw.html:48: everyting ==> everything
data/artemis-18.1.0+dfsg/src/main/java/org/gmod/schema/dao/SequenceDaoI.java:236: seperated ==> separated
data/artemis-18.1.0+dfsg/src/main/java/org/gmod/schema/sequence/Feature.java:450: preferrably ==> preferably
data/artemis-18.1.0+dfsg/src/main/java/org/gmod/schema/utils/CountedName.java:4: occurences ==> occurrences
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/Action.java:98: occured ==> occurred
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/Entry.java:495: occured ==> occurred
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/Entry.java:592: occured ==> occurred
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/Entry.java:620: occured ==> occurred
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/Entry.java:695: occured ==> occurred
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/Entry.java:824: postion ==> position
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/EntryGroup.java:309: postion ==> position
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/ExternalProgram.java:782: dirtectory ==> directory
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/Feature.java:611: coloumn ==> column
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/Feature.java:947: occured ==> occurred
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/Feature.java:971: occured ==> occurred
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/Feature.java:995: contians ==> contains
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/Feature.java:1018: occured ==> occurred
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/Feature.java:1034: exisiting ==> existing
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/Feature.java:1045: occured ==> occurred
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/Feature.java:1081: occured ==> occurred
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/Feature.java:1777: inclding ==> including
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/FilteredEntryGroup.java:647: postion ==> position
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/ProcessMonitor.java:84: ouput ==> output
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/SimpleEntryGroup.java:147: occured ==> occurred
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/SimpleEntryGroup.java:308: occured ==> occurred
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/SimpleEntryGroup.java:617: occured ==> occurred
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/SimpleEntryGroup.java:695: occured ==> occurred
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/SimpleEntryGroup.java:1017: postion ==> position
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/chado/ChadoCvTermView.java:331: inPort ==> import
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/chado/ChadoCvTermView.java:332: inPort ==> import
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/chado/ChadoCvTermView.java:357: inPort ==> import
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/chado/ChadoCvTermView.java:376: inPort ==> import
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/chado/ChadoDemo.java:448: inPort ==> import
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/chado/ChadoDemo.java:449: inPort ==> import
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/chado/ChadoDemo.java:474: inPort ==> import
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/chado/ChadoDemo.java:487: inPort ==> import
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/chado/DbSqlConfig.java:86: doesnt ==> doesn't, does not
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/chado/IBatisDAO.java:60: implemetation ==> implementation
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/chado/JdbcDAO.java:60: implemetation ==> implementation
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/circular/MemoryComboBox.java:121: existance ==> existence
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/circular/Wizard.java:1072: aboout ==> about
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/circular/digest/EmbossDigestParser.java:47: does't ==> doesn't
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/components/AddMenu.java:918: prevEnd ==> prevent
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/components/AddMenu.java:933: prevEnd ==> prevent
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/components/AddMenu.java:939: prevEnd ==> prevent
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/components/AddMenu.java:943: prevEnd ==> prevent
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/components/AddMenu.java:945: prevEnd ==> prevent
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/components/AddMenu.java:958: prevEnd ==> prevent
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/components/AddMenu.java:998: prevEnd ==> prevent
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/components/AddMenu.java:1006: prevEnd ==> prevent
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/components/AddMenu.java:1010: prevEnd ==> prevent
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/components/AddMenu.java:1012: prevEnd ==> prevent
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/components/AddMenu.java:1023: prevEnd ==> prevent
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/components/BasePlot.java:445: trough ==> through
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/components/DisplayComponent.java:33: discribing ==> describing
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/components/EditMenu.java:1637: orignal ==> original
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/components/EditMenu.java:1993: qualifer ==> qualifier
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/components/EditMenu.java:3036: connot ==> cannot
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/components/EditMenu.java:3144: connot ==> cannot
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/components/EditMenu.java:3204: connot ==> cannot
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/components/FeatureDisplay.java:438: Overriden ==> Overridden
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/components/FeatureEdit.java:684: overlaping ==> overlapping
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/components/FeatureEdit.java:1001: annotaion ==> annotation
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/components/FeatureEdit.java:1050: dirtectory ==> directory
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/components/FeatureInfo.java:53: infomation ==> information
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/components/FeatureList.java:164: posible ==> possible
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/components/Navigator.java:527: seqeunce ==> sequence
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/components/Plot.java:422: trough ==> through
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/components/QualifierChoice.java:139: refect ==> reflect
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/components/QualifierTextArea.java:225: hyerlink ==> hyperlink
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/components/SelectMenu.java:946: orginal ==> original
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/components/TransferAnnotationTool.java:551: TRANSFERING ==> TRANSFERRING
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/components/TransferAnnotationTool.java:1021: qualifer ==> qualifier
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/components/ViewMenu.java:1299: choosen ==> chosen
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/components/ViewMenu.java:1346: choosen ==> chosen
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/components/WriteMenu.java:398: choosen ==> chosen
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/components/WriteMenu.java:435: choosen ==> chosen
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/components/WriteMenu.java:472: choosen ==> chosen
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/components/WriteMenu.java:493: choosen ==> chosen
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/components/WriteMenu.java:568: mutiple ==> multiple
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/components/WriteMenu.java:636: choosen ==> chosen
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/components/WriteMenu.java:725: choosen ==> chosen
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/components/WriteMenu.java:938: choosen ==> chosen
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/components/WriteMenu.java:1164: choosen ==> chosen
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/components/YesNoDialog.java:63: uise ==> use
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/components/alignment/LineAttributes.java:93: Contruct ==> Construct
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/components/filetree/JTreeTable.java:397: alread ==> already
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/components/filetree/JTreeTable.java:465: alread ==> already
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/components/filetree/LocalAndRemoteFileManager.java:98: etablished ==> established
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/components/filetree/TreeTableModel.java:30: inforamtion ==> information
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/components/filetree/TreeTableModel.java:44: availible ==> available
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/components/genebuilder/BasicGeneViewerPanel.java:793: dragable ==> draggable
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/components/genebuilder/GeneUtils.java:1027: consisent ==> consistent
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/components/genebuilder/GeneViewerPanel.java:1688: dragable ==> draggable
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/components/genebuilder/ReferencesPanel.java:151: lits ==> list
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/components/genebuilder/ReferencesPanel.java:152: lits ==> list
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/components/genebuilder/ReferencesPanel.java:182: lits ==> list
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/components/genebuilder/ReferencesPanel.java:183: lits ==> list
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/components/genebuilder/ReferencesPanel.java:184: lits ==> list
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/components/genebuilder/ReferencesPanel.java:184: lits ==> list
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/components/genebuilder/ReferencesPanel.java:185: lits ==> list
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/components/genebuilder/cv/GoBox.java:62: HDA ==> HAD
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/components/genebuilder/cv/GoBox.java:65: ND ==> AND, 2ND
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/components/genebuilder/cv/GoBox.java:67: HDA ==> HAD
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/components/genebuilder/cv/GoBox.java:89: ND ==> AND, 2ND
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/components/genebuilder/cv/GoBox.java:650: ND ==> AND, 2ND
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/components/genebuilder/ortholog/MatchPanel.java:474: usualy ==> usually
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/components/genebuilder/ortholog/OrthoParalogTable.java:101: Contruct ==> Construct
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/components/genebuilder/ortholog/OrthoParalogTable.java:548: seperate ==> separate
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/components/genebuilder/ortholog/SimilarityTable.java:80: Contruct ==> Construct
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/components/variant/IOUtils.java:1479: dirtectory ==> directory
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/components/variant/VCFview.java:1110: nNumber ==> number
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/cramtools/ref/PathPattern.java:49: prevEnd ==> prevent
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/cramtools/ref/PathPattern.java:53: prevEnd ==> prevent
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/cramtools/ref/PathPattern.java:56: prevEnd ==> prevent
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/cramtools/ref/PathPattern.java:58: prevEnd ==> prevent
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/cramtools/ref/ReferenceSource.java:339: suspicous ==> suspicious
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/editor/BrowserControl.java:143: examing ==> examining
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/io/BioJavaSequence.java:20: aCount ==> account
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/io/BioJavaSequence.java:47: aCount ==> account
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/io/BioJavaSequence.java:79: aCount ==> account
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/io/BioJavaSequence.java:162: aCount ==> account
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/io/DocumentFeature.java:27: Faeture ==> Feature
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/io/Location.java:130: postion ==> position
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/io/LocationLexer.java:88: wil ==> will, well
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/io/LocationLexer.java:104: wil ==> will, well
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/io/LocationParseException.java:59: occured ==> occurred
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/io/PartialSequence.java:61: ony ==> only
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/io/PublicDBDocumentEntry.java:408: ND ==> AND, 2ND
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/io/PublicDBStreamFeature.java:478: writting ==> writing
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/io/PublicDBStreamFeature.java:483: writting ==> writing
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/io/PublicDBStreamFeature.java:506: coloumn ==> column
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/io/PublicDBStreamFeature.java:541: remainer ==> remainder
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/io/QualifierInfo.java:45: compulsary ==> compulsory
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/io/QualifierVector.java:56: contians ==> contains
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/io/QualifierVector.java:81: exisiting ==> existing
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/io/Range.java:143: postion ==> position
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/io/ReadAndWriteEntry.java:309: tthe ==> the
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/io/ReadAndWriteEntry.java:311: tthe ==> the
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/io/ReadAndWriteEntry.java:397: initalise ==> initialise
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/io/ReadFormatException.java:58: occured ==> occurred
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/io/UI.java:35: initalise ==> initialise
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/io/ValidateFeature.java:335: ND ==> AND, 2ND
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/io/ValidateFeature.java:363: ND ==> AND, 2ND
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/io/ValidateFeature.java:365: HDA ==> HAD
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/io/ValidateFeature.java:683: atribute ==> attribute
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/io/ValidateFeature.java:1028: tthe ==> the
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/plot/CSCSAlgorithm.java:203: Ser ==> Set
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/plot/CSCSAlgorithm.java:204: ser ==> set
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/plot/CSCSAlgorithm.java:207: ser ==> set
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/plot/CoilFeatureAlgorithm.java:36: alogrithm ==> algorithm
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/plot/CoilFeatureAlgorithm.java:233: Ser ==> Set
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/plot/ICDIAlgorithm.java:208: Ser ==> Set
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/plot/LineAttributes.java:98: Contruct ==> Construct
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/plot/MRIAlgorithm.java:239: Ser ==> Set
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/plot/MRIAlgorithm.java:240: ser ==> set
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/plot/MRIAlgorithm.java:243: ser ==> set
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/plot/NcAlgorithm.java:222: Ser ==> Set
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/plot/ScaledChiAlgorithm.java:186: Ser ==> Set
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/sequence/AminoAcidSequence.java:993: containg ==> containing
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/sequence/AminoAcidSequence.java:1007: Ser ==> Set
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/sequence/Bases.java:89: repectively ==> respectively
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/sequence/Marker.java:33: postions ==> positions
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/sequence/Marker.java:90: postion ==> position
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/util/DatabaseDocument.java:475: refered ==> referred
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/util/DatabaseDocument.java:484: refered ==> referred
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/util/DatabaseDocument.java:2955: exeption ==> exception, exemption
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/util/Document.java:75: refered ==> referred
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/util/Document.java:81: refered ==> referred
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/util/FileDocument.java:75: refered ==> referred
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/util/FileDocument.java:88: refered ==> referred
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/util/RemoteFileDocument.java:84: refered ==> referred
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/util/RemoteFileDocument.java:94: refered ==> referred
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/util/TextDocument.java:86: refered ==> referred
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/util/TextDocument.java:96: refered ==> referred
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/util/URLDocument.java:85: refered ==> referred
data/artemis-18.1.0+dfsg/src/main/java/uk/ac/sanger/artemis/util/URLDocument.java:95: refered ==> referred
data/artemis-18.1.0+dfsg/src/test/evosuite/uk/ac/sanger/artemis/ExternalProgram_ESTest_scaffolding.java:323: Commitable ==> Committable
data/artemis-18.1.0+dfsg/src/test/evosuite/uk/ac/sanger/artemis/FeatureChangeEvent_ESTest.java:60: Ser ==> Set
data/artemis-18.1.0+dfsg/src/test/evosuite/uk/ac/sanger/artemis/FilteredEntryGroup_ESTest.java:4108: UE ==> USE, DUE
data/artemis-18.1.0+dfsg/src/test/evosuite/uk/ac/sanger/artemis/components/GraphMenu_ESTest.java:33: wQS ==> was
data/artemis-18.1.0+dfsg/src/test/evosuite/uk/ac/sanger/artemis/components/GraphMenu_ESTest.java:33: dnE ==> done
data/artemis-18.1.0+dfsg/src/test/evosuite/uk/ac/sanger/artemis/components/GraphMenu_ESTest.java:36: wQS ==> was
data/artemis-18.1.0+dfsg/src/test/evosuite/uk/ac/sanger/artemis/components/GraphMenu_ESTest.java:36: dnE ==> done
data/artemis-18.1.0+dfsg/src/test/evosuite/uk/ac/sanger/artemis/components/RunPfamSearchThread_ESTest.java:40: seach ==> search
data/artemis-18.1.0+dfsg/src/test/evosuite/uk/ac/sanger/artemis/components/genebuilder/GeneUtils_ESTest_scaffolding.java:370: Commitable ==> Committable
data/artemis-18.1.0+dfsg/src/test/evosuite/uk/ac/sanger/artemis/components/genebuilder/cv/CVPanel_ESTest_scaffolding.java:279: Commitable ==> Committable
data/artemis-18.1.0+dfsg/src/test/evosuite/uk/ac/sanger/artemis/components/genebuilder/gff/BasicPropertiesPanel_ESTest_scaffolding.java:359: Commitable ==> Committable
data/artemis-18.1.0+dfsg/src/test/evosuite/uk/ac/sanger/artemis/components/genebuilder/ortholog/AbstractMatchTable_ESTest.java:278: Ba ==> By, be
data/artemis-18.1.0+dfsg/src/test/evosuite/uk/ac/sanger/artemis/components/genebuilder/ortholog/AbstractMatchTable_ESTest.java:278: Ba ==> By, be
data/artemis-18.1.0+dfsg/src/test/evosuite/uk/ac/sanger/artemis/components/genebuilder/ortholog/AbstractMatchTable_ESTest.java:279: Ba ==> By, be
data/artemis-18.1.0+dfsg/src/test/evosuite/uk/ac/sanger/artemis/components/genebuilder/ortholog/AbstractMatchTable_ESTest.java:279: Ba ==> By, be
data/artemis-18.1.0+dfsg/src/test/evosuite/uk/ac/sanger/artemis/components/genebuilder/ortholog/AbstractMatchTable_ESTest.java:282: Ba ==> By, be
data/artemis-18.1.0+dfsg/src/test/evosuite/uk/ac/sanger/artemis/components/genebuilder/ortholog/AbstractMatchTable_ESTest.java:282: Ba ==> By, be
data/artemis-18.1.0+dfsg/src/test/evosuite/uk/ac/sanger/artemis/editor/BigPane_ESTest_scaffolding.java:314: Commitable ==> Committable
data/artemis-18.1.0+dfsg/src/test/evosuite/uk/ac/sanger/artemis/editor/DataViewInternalFrame_ESTest.java:48: Ot ==> To, of, or
data/artemis-18.1.0+dfsg/src/test/evosuite/uk/ac/sanger/artemis/editor/DataViewInternalFrame_ESTest.java:63: Ot ==> To, of, or
data/artemis-18.1.0+dfsg/src/test/evosuite/uk/ac/sanger/artemis/editor/DataViewInternalFrame_ESTest.java:231: Ot ==> To, of, or
data/artemis-18.1.0+dfsg/src/test/evosuite/uk/ac/sanger/artemis/editor/DataViewInternalFrame_ESTest.java:384: Ot ==> To, of, or
data/artemis-18.1.0+dfsg/src/test/evosuite/uk/ac/sanger/artemis/editor/DataViewInternalFrame_ESTest.java:469: Ot ==> To, of, or
data/artemis-18.1.0+dfsg/src/test/evosuite/uk/ac/sanger/artemis/editor/DataViewInternalFrame_ESTest.java:554: Ot ==> To, of, or
data/artemis-18.1.0+dfsg/src/test/evosuite/uk/ac/sanger/artemis/editor/DataViewInternalFrame_ESTest.java:664: Ot ==> To, of, or
data/artemis-18.1.0+dfsg/src/test/evosuite/uk/ac/sanger/artemis/editor/DataViewInternalFrame_ESTest.java:696: Ot ==> To, of, or
data/artemis-18.1.0+dfsg/src/test/evosuite/uk/ac/sanger/artemis/editor/DataViewInternalFrame_ESTest.java:705: Ot ==> To, of, or
data/artemis-18.1.0+dfsg/src/test/evosuite/uk/ac/sanger/artemis/editor/FastaTextPane_ESTest_scaffolding.java:329: Commitable ==> Committable
data/artemis-18.1.0+dfsg/src/test/evosuite/uk/ac/sanger/artemis/io/GFF3AttributeBuilder_ESTest.java:134: valu ==> value
data/artemis-18.1.0+dfsg/src/test/evosuite/uk/ac/sanger/artemis/io/GFF3AttributeBuilder_ESTest.java:144: valu ==> value
data/artemis-18.1.0+dfsg/src/test/evosuite/uk/ac/sanger/artemis/io/LocationLexer_ESTest.java:478: Fo ==> Of, for
data/artemis-18.1.0+dfsg/src/test/evosuite/uk/ac/sanger/artemis/io/LocationLexer_ESTest.java:480: Fo ==> Of, for
data/artemis-18.1.0+dfsg/src/test/evosuite/uk/ac/sanger/artemis/io/MSPcrunchStreamFeature_ESTest.java:120: featur ==> feature
data/artemis-18.1.0+dfsg/src/test/evosuite/uk/ac/sanger/artemis/io/RawStreamSequence_ESTest.java:86: Te ==> The, be, we
data/artemis-18.1.0+dfsg/src/test/evosuite/uk/ac/sanger/artemis/io/RawStreamSequence_ESTest.java:86: Te ==> The, be, we
data/artemis-18.1.0+dfsg/src/test/evosuite/uk/ac/sanger/artemis/io/ReadAndWriteEntry_ESTest.java:129: tthe ==> the
data/artemis-18.1.0+dfsg/src/test/evosuite/uk/ac/sanger/artemis/plot/CodonUsageAlgorithm_ESTest_scaffolding.java:316: Commitable ==> Committable
data/artemis-18.1.0+dfsg/src/test/evosuite/uk/ac/sanger/artemis/plot/NcAlgorithm_ESTest_scaffolding.java:358: Commitable ==> Committable
data/artemis-18.1.0+dfsg/src/test/evosuite/uk/ac/sanger/artemis/sequence/AminoAcidSequence_ESTest.java:2381: ue ==> use, due
data/artemis-18.1.0+dfsg/src/test/evosuite/uk/ac/sanger/artemis/sequence/AminoAcidSequence_ESTest.java:10415: Ser ==> Set
data/artemis-18.1.0+dfsg/src/test/evosuite/uk/ac/sanger/artemis/sequence/AminoAcidSequence_ESTest.java:11852: Ser ==> Set
data/artemis-18.1.0+dfsg/src/test/evosuite/uk/ac/sanger/artemis/sequence/AminoAcidSequence_ESTest.java:16352: Ser ==> Set
data/artemis-18.1.0+dfsg/src/test/evosuite/uk/ac/sanger/artemis/sequence/MarkerRange_ESTest.java:58: unexpecte ==> unexpected
data/artemis-18.1.0+dfsg/src/test/evosuite/uk/ac/sanger/artemis/util/FileDocument_ESTest.java:50: Nd ==> And, 2nd
data/artemis-18.1.0+dfsg/src/test/evosuite/uk/ac/sanger/artemis/util/FileDocument_ESTest.java:176: Nd ==> And, 2nd
data/artemis-18.1.0+dfsg/src/test/java/uk/ac/sanger/artemis/FeatureSegmentTest.java:89: exeption ==> exception, exemption
data/artemis-18.1.0+dfsg/src/test/java/uk/ac/sanger/artemis/FeatureSegmentTest.java:122: exeption ==> exception, exemption
data/artemis-18.1.0+dfsg/src/test/java/uk/ac/sanger/artemis/FeatureTest.java:754: atleast ==> at least
data/artemis-18.1.0+dfsg/src/test/java/uk/ac/sanger/artemis/io/ValidateFeatureTest.java:470: HDA ==> HAD
data/artemis-18.1.0+dfsg/src/test/java/uk/ac/sanger/artemis/io/ValidateFeatureTest.java:474: HDA ==> HAD
data/artemis-18.1.0+dfsg/src/test/java/uk/ac/sanger/artemis/io/ValidateFeatureTest.java:484: HDA ==> HAD
data/artemis-18.1.0+dfsg/src/test/java/uk/ac/sanger/artemis/io/ValidateFeatureTest.java:484: HDA ==> HAD
data/artemis-18.1.0+dfsg/src/test/java/uk/ac/sanger/artemis/io/ValidateFeatureTest.java:487: HDA ==> HAD
data/artemis-18.1.0+dfsg/src/test/java/uk/ac/sanger/artemis/io/ValidateFeatureTest.java:491: HDA ==> HAD
data/artemis-18.1.0+dfsg/src/test/java/uk/ac/sanger/artemis/io/ValidateFeatureTest.java:501: HDA ==> HAD
data/artemis-18.1.0+dfsg/src/test/java/uk/ac/sanger/artemis/sequence/AminoAcidSequenceTest.java:95: uknown ==> unknown
data/artemis-18.1.0+dfsg/src/test/java/uk/ac/sanger/artemis/sequence/AminoAcidSequenceTest.java:110: uknown ==> unknown
data/artemis-18.1.0+dfsg/src/test/java/uk/ac/sanger/artemis/sequence/AminoAcidSequenceTest.java:125: uknown ==> unknown
data/artemis-18.1.0+dfsg/src/test/java/uk/ac/sanger/artemis/sequence/AminoAcidSequenceTest.java:140: uknown ==> unknown
data/artemis-18.1.0+dfsg/src/test/java/uk/ac/sanger/artemis/sequence/AminoAcidSequenceTest.java:353: Ser ==> Set
data/artemis-18.1.0+dfsg/src/test/java/uk/ac/sanger/artemis/sequence/AminoAcidSequenceTest.java:381: Ser ==> Set
data/artemis-18.1.0+dfsg/debian/changelog:42: primitiv ==> primitive