data/gmap-2020-11-20+ds/ChangeLog:2075: paramters ==> parameters data/gmap-2020-11-20+ds/ChangeLog:8343: intial ==> initial data/gmap-2020-11-20+ds/ChangeLog:8862: univeral ==> universal data/gmap-2020-11-20+ds/ChangeLog:15696: shortend ==> shortened, short end data/gmap-2020-11-20+ds/ChangeLog:16760: shortend ==> shortened, short end data/gmap-2020-11-20+ds/ChangeLog:19432: Thie ==> The, this data/gmap-2020-11-20+ds/ChangeLog:19435: Thie ==> The, this data/gmap-2020-11-20+ds/ChangeLog:20723: wiht ==> with data/gmap-2020-11-20+ds/ChangeLog:22546: inactivate ==> deactivate data/gmap-2020-11-20+ds/ChangeLog:22549: inactivate ==> deactivate data/gmap-2020-11-20+ds/ChangeLog:23433: functios ==> functions data/gmap-2020-11-20+ds/ChangeLog:26490: behing ==> behind, being data/gmap-2020-11-20+ds/config/acx_mmap_variable.m4:92: creat ==> create data/gmap-2020-11-20+ds/config/expand.m4:10: necesary ==> necessary data/gmap-2020-11-20+ds/config/acx_mmap_fixed.m4:92: creat ==> create data/gmap-2020-11-20+ds/src/simplepair.c:1647: tHI ==> the, this data/gmap-2020-11-20+ds/src/shortread.h:94: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.h:99: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.h:105: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.h:112: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.h:118: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.h:123: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.h:130: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.h:144: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/sequence.c:341: ACN ==> CAN, ACNE data/gmap-2020-11-20+ds/src/splicetrie.c:103: offsett ==> offset data/gmap-2020-11-20+ds/src/splicetrie.c:109: offsett ==> offset data/gmap-2020-11-20+ds/src/splicetrie.c:123: offsett ==> offset data/gmap-2020-11-20+ds/src/splicetrie.c:134: offsett ==> offset data/gmap-2020-11-20+ds/src/splicetrie.c:139: offsett ==> offset data/gmap-2020-11-20+ds/src/splicetrie.c:152: offsett ==> offset data/gmap-2020-11-20+ds/src/splicetrie.c:184: offsett ==> offset data/gmap-2020-11-20+ds/src/splicetrie.c:389: offsett ==> offset data/gmap-2020-11-20+ds/src/splicetrie.c:430: offsett ==> offset data/gmap-2020-11-20+ds/src/splicetrie.c:471: offsett ==> offset data/gmap-2020-11-20+ds/src/splicetrie.c:670: offsett ==> offset data/gmap-2020-11-20+ds/src/splicetrie.c:711: offsett ==> offset data/gmap-2020-11-20+ds/src/stage3.c:6849: stopp ==> stop data/gmap-2020-11-20+ds/src/stage3.c:6874: stopp ==> stop data/gmap-2020-11-20+ds/src/stage3.c:6875: stopp ==> stop data/gmap-2020-11-20+ds/src/stage3.c:6878: stopp ==> stop data/gmap-2020-11-20+ds/src/stage3.c:6896: stopp ==> stop data/gmap-2020-11-20+ds/src/stage3.c:6910: stopp ==> stop data/gmap-2020-11-20+ds/src/stage3.c:6911: stopp ==> stop data/gmap-2020-11-20+ds/src/stage3.c:6917: stopp ==> stop data/gmap-2020-11-20+ds/src/stage3.c:6920: stopp ==> stop data/gmap-2020-11-20+ds/src/stage3.c:6942: stopp ==> stop data/gmap-2020-11-20+ds/src/stage3.c:6949: stopp ==> stop data/gmap-2020-11-20+ds/src/stage3.c:6955: stopp ==> stop data/gmap-2020-11-20+ds/src/stage3.c:6979: stopp ==> stop data/gmap-2020-11-20+ds/src/stage3.c:6980: stopp ==> stop data/gmap-2020-11-20+ds/src/stage3.c:6993: stopp ==> stop data/gmap-2020-11-20+ds/src/stage3.c:7840: stopp ==> stop data/gmap-2020-11-20+ds/src/stage3.c:7865: stopp ==> stop data/gmap-2020-11-20+ds/src/stage3.c:7866: stopp ==> stop data/gmap-2020-11-20+ds/src/stage3.c:7869: stopp ==> stop data/gmap-2020-11-20+ds/src/stage3.c:7887: stopp ==> stop data/gmap-2020-11-20+ds/src/stage3.c:7901: stopp ==> stop data/gmap-2020-11-20+ds/src/stage3.c:7902: stopp ==> stop data/gmap-2020-11-20+ds/src/stage3.c:7908: stopp ==> stop data/gmap-2020-11-20+ds/src/stage3.c:7911: stopp ==> stop data/gmap-2020-11-20+ds/src/stage3.c:7933: stopp ==> stop data/gmap-2020-11-20+ds/src/stage3.c:7940: stopp ==> stop data/gmap-2020-11-20+ds/src/stage3.c:7946: stopp ==> stop data/gmap-2020-11-20+ds/src/stage3.c:7968: stopp ==> stop data/gmap-2020-11-20+ds/src/stage3.c:7969: stopp ==> stop data/gmap-2020-11-20+ds/src/stage3.c:7981: stopp ==> stop data/gmap-2020-11-20+ds/src/stage3.c:12047: nknown ==> unknown data/gmap-2020-11-20+ds/src/stage3.c:12071: nknown ==> unknown data/gmap-2020-11-20+ds/src/stage3.c:12176: nknown ==> unknown data/gmap-2020-11-20+ds/src/stage3.c:12810: stopp ==> stop data/gmap-2020-11-20+ds/src/stage3.c:12823: stopp ==> stop data/gmap-2020-11-20+ds/src/stage3.c:12824: stopp ==> stop data/gmap-2020-11-20+ds/src/stage3.c:12873: stopp ==> stop data/gmap-2020-11-20+ds/src/stage3.c:12912: stopp ==> stop data/gmap-2020-11-20+ds/src/stage3.c:12948: stopp ==> stop data/gmap-2020-11-20+ds/src/stage3.c:12949: stopp ==> stop data/gmap-2020-11-20+ds/src/stage3.c:12998: stopp ==> stop data/gmap-2020-11-20+ds/src/stage3.c:13037: stopp ==> stop data/gmap-2020-11-20+ds/src/stage3.c:15010: hve ==> have data/gmap-2020-11-20+ds/src/stage3.c:15113: hve ==> have data/gmap-2020-11-20+ds/src/iit_get.c:978: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/iit_get.c:1172: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/iit_get.c:1196: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/iit_get.c:1201: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/pair.c:5870: tHI ==> the, this data/gmap-2020-11-20+ds/src/iit-read-univ.c:1960: stopp ==> stop data/gmap-2020-11-20+ds/src/iit-read-univ.c:1987: stopp ==> stop data/gmap-2020-11-20+ds/src/iit-read-univ.c:1988: stopp ==> stop data/gmap-2020-11-20+ds/src/iit-read.c:5190: stopp ==> stop data/gmap-2020-11-20+ds/src/iit-read.c:5213: stopp ==> stop data/gmap-2020-11-20+ds/src/iit-read.c:5214: stopp ==> stop data/gmap-2020-11-20+ds/src/iit-read.c:5229: stopp ==> stop data/gmap-2020-11-20+ds/src/iit-read.c:5239: stopp ==> stop data/gmap-2020-11-20+ds/src/iit-read.c:5240: stopp ==> stop data/gmap-2020-11-20+ds/src/iit-read.c:5251: stopp ==> stop data/gmap-2020-11-20+ds/src/iit-read.c:5273: stopp ==> stop data/gmap-2020-11-20+ds/src/iit-read.c:5293: stopp ==> stop data/gmap-2020-11-20+ds/src/iit-read.c:5294: stopp ==> stop data/gmap-2020-11-20+ds/src/iit-read.c:5309: stopp ==> stop data/gmap-2020-11-20+ds/src/iit-read.c:5319: stopp ==> stop data/gmap-2020-11-20+ds/src/iit-read.c:5320: stopp ==> stop data/gmap-2020-11-20+ds/src/iit-read.c:5331: stopp ==> stop data/gmap-2020-11-20+ds/src/iit-read.c:5354: stopp ==> stop data/gmap-2020-11-20+ds/src/iit-read.c:5377: stopp ==> stop data/gmap-2020-11-20+ds/src/iit-read.c:5378: stopp ==> stop data/gmap-2020-11-20+ds/src/iit-read.c:5396: stopp ==> stop data/gmap-2020-11-20+ds/src/iit-read.c:5406: stopp ==> stop data/gmap-2020-11-20+ds/src/iit-read.c:5407: stopp ==> stop data/gmap-2020-11-20+ds/src/iit-read.c:5420: stopp ==> stop data/gmap-2020-11-20+ds/src/iit-read.c:5443: stopp ==> stop data/gmap-2020-11-20+ds/src/iit-read.c:5465: stopp ==> stop data/gmap-2020-11-20+ds/src/iit-read.c:5466: stopp ==> stop data/gmap-2020-11-20+ds/src/iit-read.c:5482: stopp ==> stop data/gmap-2020-11-20+ds/src/iit-read.c:5494: stopp ==> stop data/gmap-2020-11-20+ds/src/iit-read.c:5495: stopp ==> stop data/gmap-2020-11-20+ds/src/iit-read.c:5511: stopp ==> stop data/gmap-2020-11-20+ds/src/iit-read.c:5537: stopp ==> stop data/gmap-2020-11-20+ds/src/iit-read.c:5565: stopp ==> stop data/gmap-2020-11-20+ds/src/iit-read.c:5566: stopp ==> stop data/gmap-2020-11-20+ds/src/dynprog_end.c:1441: achive ==> achieve, archive data/gmap-2020-11-20+ds/src/kmer-search.c:401: matc ==> match data/gmap-2020-11-20+ds/src/kmer-search.c:419: matc ==> match data/gmap-2020-11-20+ds/src/translation.c:2391: daa ==> data data/gmap-2020-11-20+ds/src/translation.c:2429: daa ==> data data/gmap-2020-11-20+ds/src/shortread.c:355: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:385: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:432: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:458: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:506: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:532: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:652: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:683: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:742: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:769: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:829: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:856: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:2111: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:2118: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:2244: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:2316: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:2356: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:2367: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:2371: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:2374: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:2395: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:2432: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:2438: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:2456: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:2457: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:2466: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:2467: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:2490: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:2496: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:2517: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:2589: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:2622: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:2633: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:2637: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:2640: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:2660: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:2690: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:2696: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:2713: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:2714: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:2723: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:2724: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:2746: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:2752: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:2775: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:2841: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:2874: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:2885: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:2889: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:2892: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:2909: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:2939: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:2945: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:2962: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:2963: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:2972: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:2973: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:2995: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:3001: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:3023: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:3097: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:3132: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:3143: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:3218: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:3253: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:3265: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:3336: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:3371: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:3384: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:3463: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:3482: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:3497: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:3507: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:3512: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:3542: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:3557: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:3577: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:3657: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:3675: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:3689: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:3700: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:3705: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:3734: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:3748: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:3768: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:3841: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:3859: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:3873: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:3884: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:3889: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:3918: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:3932: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:3958: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:3969: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:3976: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:3981: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:3988: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:3995: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:4001: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:4006: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:4014: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:4021: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:4027: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/shortread.c:4032: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/stage3hr.c:6850: debugee ==> debuggee data/gmap-2020-11-20+ds/src/splicetrie_build.c:119: offsett ==> offset data/gmap-2020-11-20+ds/src/splicetrie_build.c:152: offsett ==> offset data/gmap-2020-11-20+ds/src/splicetrie_build.c:157: offsett ==> offset data/gmap-2020-11-20+ds/src/splicetrie_build.c:169: offsett ==> offset data/gmap-2020-11-20+ds/src/pbinom.c:658: Numer ==> Number data/gmap-2020-11-20+ds/src/pbinom.c:658: Ser ==> Set data/gmap-2020-11-20+ds/src/pbinom.c:731: ser ==> set data/gmap-2020-11-20+ds/src/pbinom.c:732: ser ==> set data/gmap-2020-11-20+ds/src/pbinom.c:751: ser ==> set data/gmap-2020-11-20+ds/src/pbinom.c:752: ser ==> set data/gmap-2020-11-20+ds/src/pbinom.c:926: ans ==> and data/gmap-2020-11-20+ds/src/pbinom.c:929: ans ==> and data/gmap-2020-11-20+ds/src/pbinom.c:934: ans ==> and data/gmap-2020-11-20+ds/src/pbinom.c:935: ans ==> and data/gmap-2020-11-20+ds/src/pbinom.c:942: ans ==> and data/gmap-2020-11-20+ds/src/pbinom.c:1309: ser ==> set data/gmap-2020-11-20+ds/src/pbinom.c:1310: ser ==> set data/gmap-2020-11-20+ds/src/types.h:34: whic ==> which data/gmap-2020-11-20+ds/src/iit_store.c:855: Subract ==> Subtract data/gmap-2020-11-20+ds/src/boyer-moore.c:530: Assymetry ==> Asymmetry data/gmap-2020-11-20+ds/src/samprint.c:455: tHI ==> the, this data/gmap-2020-11-20+ds/src/samprint.c:712: tHI ==> the, this data/gmap-2020-11-20+ds/src/samprint.c:1183: tHI ==> the, this data/gmap-2020-11-20+ds/src/inbuffer.c:223: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/inbuffer.c:238: skipp ==> skip, skipped data/gmap-2020-11-20+ds/src/inbuffer.c:239: skipp ==> skip, skipped data/gmap-2020-11-20+ds/debian/changelog:476: architecure ==> architecture data/gmap-2020-11-20+ds/debian/changelog:478: embeded ==> embedded data/gmap-2020-11-20+ds/debian/changelog:547: builded ==> built data/gmap-2020-11-20+ds/debian/gmap.lintian-overrides:1: ofO ==> of