data/murasaki-1.68.6/names2kog.pl:106: hsa ==> has
data/murasaki-1.68.6/simplegraph.pl:285: guranteed ==> guaranteed
data/murasaki-1.68.6/kogalign.pl:200: aligment ==> alignment
data/murasaki-1.68.6/roc-at-cutoff.pl:119: fpr ==> for, far, fps
data/murasaki-1.68.6/roc-at-cutoff.pl:167: fpr ==> for, far, fps
data/murasaki-1.68.6/roc-at-cutoff.pl:168: fpr ==> for, far, fps
data/murasaki-1.68.6/phAlignment2anchors.pl:101: nothin ==> nothing
data/murasaki-1.68.6/cgr-image.pl:205: Couldnt ==> Couldn't
data/murasaki-1.68.6/geneparse.pl:161: willl ==> will
data/murasaki-1.68.6/geneparse.pl:161: stil ==> still
data/murasaki-1.68.6/faformat.pl:37: useable ==> usable
data/murasaki-1.68.6/stat-histo.pl:80: hist ==> heist, his
data/murasaki-1.68.6/stat-histo.pl:81: hist ==> heist, his
data/murasaki-1.68.6/gatherstats.pl:194: Non-existant ==> Non-existent
data/murasaki-1.68.6/getcds.pl:567: availabe ==> available
data/murasaki-1.68.6/filter.pl:48: fpr ==> for, far, fps
data/murasaki-1.68.6/filter.pl:505: isnt ==> isn't
data/murasaki-1.68.6/filter.pl:540: cant ==> can't
data/murasaki-1.68.6/filter.pl:568: hist ==> heist, his
data/murasaki-1.68.6/filter.pl:571: hist ==> heist, his
data/murasaki-1.68.6/filter.pl:573: hist ==> heist, his
data/murasaki-1.68.6/filter.pl:949: hist ==> heist, his
data/murasaki-1.68.6/filter.pl:955: doesnt ==> doesn't, does not
data/murasaki-1.68.6/filter.pl:979: hist ==> heist, his
data/murasaki-1.68.6/filter.pl:984: hist ==> heist, his
data/murasaki-1.68.6/filter.pl:1003: hist ==> heist, his
data/murasaki-1.68.6/filter.pl:1012: hist ==> heist, his
data/murasaki-1.68.6/filter.pl:1012: hist ==> heist, his
data/murasaki-1.68.6/filter.pl:1364: intial ==> initial
data/murasaki-1.68.6/filter.pl:1376: didnt ==> didn't
data/murasaki-1.68.6/filter.pl:1403: wee ==> we
data/murasaki-1.68.6/filter.pl:1436: MONKIES ==> MONKEYS
data/murasaki-1.68.6/filter.pl:1440: MONKIES ==> MONKEYS
data/murasaki-1.68.6/filter.pl:1702: indicies ==> indices
data/murasaki-1.68.6/filter.pl:1712: hsa ==> has
data/murasaki-1.68.6/filter.pl:1713: hsa ==> has
data/murasaki-1.68.6/substitch.pl:136: nothin ==> nothing
data/murasaki-1.68.6/doc/mbfa.txt:9: reprsented ==> represented
data/murasaki-1.68.6/doc/mbfa.txt:37: Geneates ==> Generates
data/murasaki-1.68.6/doc/mbfa.html:48: reprsented ==> represented
data/murasaki-1.68.6/doc/mbfa.html:86: Geneates ==> Generates
data/murasaki-1.68.6/doc/mbfa.pod:12: reprsented ==> represented
data/murasaki-1.68.6/doc/mbfa.pod:47: Geneates ==> Generates
data/murasaki-1.68.6/doc/mbfa.1:142: reprsented ==> represented
data/murasaki-1.68.6/doc/mbfa.1:171: Geneates ==> Generates
data/murasaki-1.68.6/doc/murasaki.1:303: eachother ==> each other
data/murasaki-1.68.6/doc/murasaki.html:269: eachother ==> each other
data/murasaki-1.68.6/doc/murasaki.html:570: intial ==> initial
data/murasaki-1.68.6/doc/murasaki.pod:187: eachother ==> each other
data/murasaki-1.68.6/doc/murasaki.pod:452: intial ==> initial
data/murasaki-1.68.6/doc/murasaki.txt:162: eachother ==> each other
data/murasaki-1.68.6/doc/murasaki.txt:349: intial ==> initial
data/murasaki-1.68.6/perlmodules/Murasaki.pm:81: tre ==> tree
data/murasaki-1.68.6/perlmodules/Murasaki.pm:82: tre ==> tree
data/murasaki-1.68.6/perlmodules/Murasaki.pm:89: tre ==> tree
data/murasaki-1.68.6/perlmodules/Murasaki/KOG.pm:27: hsa ==> has
data/murasaki-1.68.6/perlmodules/Murasaki/OrthoList.pm:90: isnt ==> isn't
data/murasaki-1.68.6/perlmodules/Murasaki/OrthoConsistency.pm:169: isnt ==> isn't
data/murasaki-1.68.6/perlmodules/Murasaki/OrthoPairs.pm:166: isnt ==> isn't
data/murasaki-1.68.6/src/scoring.cc:50: somehwat ==> somewhat
data/murasaki-1.68.6/src/cgr-random.cc:45: wee ==> we
data/murasaki-1.68.6/src/cgr.h:24: thign ==> thing
data/murasaki-1.68.6/src/genopts.cc:44: Invaild ==> Invalid
data/murasaki-1.68.6/src/genopts.cc:66: Invaild ==> Invalid
data/murasaki-1.68.6/src/dinkymath.cc:307: wee ==> we
data/murasaki-1.68.6/src/murasaki.h:35: shoudl ==> should
data/murasaki-1.68.6/src/cgr.cc:192: doesnt ==> doesn't, does not
data/murasaki-1.68.6/src/cmultiset.h:52: fuctions ==> functions
data/murasaki-1.68.6/src/ecolist.cc:182: Expcted ==> Expected
data/murasaki-1.68.6/src/seqread.cc:118: occurences ==> occurrences
data/murasaki-1.68.6/src/sequence.h:59: isnt ==> isn't
data/murasaki-1.68.6/src/shmvector.hh:190: compatability ==> compatibility
data/murasaki-1.68.6/src/shmvector.hh:320: dettaching ==> detaching
data/murasaki-1.68.6/src/align-compare.cc:175: atleast ==> at least
data/murasaki-1.68.6/src/Makefile:107: requierd ==> required
data/murasaki-1.68.6/src/murasaki.cc:179: procesing ==> processing
data/murasaki-1.68.6/src/murasaki.cc:567: monkies ==> monkeys
data/murasaki-1.68.6/src/murasaki.cc:1322: Dettaching ==> Detaching
data/murasaki-1.68.6/src/options.cc:600: Invaild ==> Invalid
data/murasaki-1.68.6/src/options.cc:878: eachother ==> each other
data/murasaki-1.68.6/src/sequence.cc:963: wee ==> we
data/murasaki-1.68.6/src/sequence.cc:1271: metdata ==> metadata
data/murasaki-1.68.6/src/sequence.cc:1305: synching ==> syncing
data/murasaki-1.68.6/src/sequence.cc:2403: BA ==> BY, BE
data/murasaki-1.68.6/src/sequence.cc:2983: isnt ==> isn't
data/murasaki-1.68.6/src/murasaki_mpi.cc:667: borken ==> broken
data/murasaki-1.68.6/debian-tests-data/NZ_GG705056.gbk:1919: folX ==> folks
data/murasaki-1.68.6/debian-tests-data/NZ_GG705056.gbk:2883: circularly ==> circular
data/murasaki-1.68.6/debian-tests-data/NZ_GG705056.gbk:5848: Holliday ==> Holiday
data/murasaki-1.68.6/debian-tests-data/NZ_GG705056.gbk:5849: Holliday ==> Holiday
data/murasaki-1.68.6/debian-tests-data/NZ_GG705056.gbk:10309: QueE ==> queue
data/murasaki-1.68.6/debian-tests-data/NZ_GG705056.gbk:10320: QueE ==> queue
data/murasaki-1.68.6/debian-tests-data/NZ_GG705056.gbk:10952: Holliday ==> Holiday
data/murasaki-1.68.6/debian-tests-data/NZ_GG705056.gbk:10961: Holliday ==> Holiday
data/murasaki-1.68.6/debian-tests-data/NZ_GG705056.gbk:10983: Holliday ==> Holiday
data/murasaki-1.68.6/debian-tests-data/NZ_GG705056.gbk:10995: Holliday ==> Holiday
data/murasaki-1.68.6/debian-tests-data/NZ_GG705056.gbk:11029: Holliday ==> Holiday
data/murasaki-1.68.6/debian-tests-data/NZ_GG705056.gbk:11513: Hda ==> Had
data/murasaki-1.68.6/debian-tests-data/NZ_GG705056.gbk:11523: Hda ==> Had
data/murasaki-1.68.6/debian-tests-data/NZ_GG705065.gbk:1814: STAE ==> STATE
data/murasaki-1.68.6/debian-tests-data/NZ_GG705065.gbk:2006: intially ==> initially
data/murasaki-1.68.6/debian-tests-data/NZ_GG705065.gbk:2761: formate ==> format
data/murasaki-1.68.6/debian-tests-data/NZ_GG705065.gbk:3260: Holliday ==> Holiday
data/murasaki-1.68.6/debian-tests-data/NZ_GG705055.gbk:1300: ALO ==> ALSO
data/murasaki-1.68.6/debian-tests-data/NZ_GG705055.gbk:2044: ND ==> AND, 2ND
data/murasaki-1.68.6/debian-tests-data/NZ_GG705055.gbk:4098: circularly ==> circular
data/murasaki-1.68.6/debian-tests-data/NZ_GG705063.gbk:161: Holliday ==> Holiday
data/murasaki-1.68.6/debian-tests-data/NZ_GG705063.gbk:1604: imbedded ==> embedded
data/murasaki-1.68.6/debian-tests-data/NZ_GG705063.gbk:2187: Holliday ==> Holiday
data/murasaki-1.68.6/debian-tests-data/NZ_GG705057.gbk:3431: supressor ==> suppressor
data/murasaki-1.68.6/debian-tests-data/NZ_GG705057.gbk:6302: characteristicly ==> characteristically
data/murasaki-1.68.6/debian-tests-data/NZ_GG705057.gbk:6511: Holliday ==> Holiday
data/murasaki-1.68.6/debian-tests-data/NZ_GG705069.gbk:554: imbedded ==> embedded
data/murasaki-1.68.6/debian-tests-data/NZ_GG705069.gbk:857: refered ==> referred
data/murasaki-1.68.6/debian-tests-data/NZ_GG705058.gbk:2049: characteristicly ==> characteristically
data/murasaki-1.68.6/debian-tests-data/NZ_GG705058.gbk:3748: Holliday ==> Holiday
data/murasaki-1.68.6/debian-tests-data/NZ_GG705058.gbk:4250: Holliday ==> Holiday
data/murasaki-1.68.6/debian-tests-data/NZ_GG705064.gbk:821: imbedded ==> embedded
data/murasaki-1.68.6/debian-tests-data/NZ_GG705064.gbk:2419: characteristicly ==> characteristically
data/murasaki-1.68.6/debian-tests-data/NZ_GG705060.gbk:3913: Ser ==> Set
data/murasaki-1.68.6/debian-tests-data/NZ_GG705060.gbk:3967: formate ==> format
data/murasaki-1.68.6/debian-tests-data/NZ_GG705060.gbk:3977: Formate ==> Format
data/murasaki-1.68.6/debian-tests-data/NZ_GG705060.gbk:4447: formate ==> format
data/murasaki-1.68.6/debian-tests-data/NZ_GG705060.gbk:4478: formate ==> format
data/murasaki-1.68.6/debian-tests-data/NZ_GG705059.gbk:550: characteristicly ==> characteristically
data/murasaki-1.68.6/debian-tests-data/NZ_GG705059.gbk:7669: imbedded ==> embedded
data/murasaki-1.68.6/debian-tests-data/NZ_GG705068.gbk:2210: imbedded ==> embedded
data/murasaki-1.68.6/debian/patches/spelling.patch:11: unitilized ==> uninitialized
data/murasaki-1.68.6/debian/patches/spelling.patch:20: executation ==> execution
data/murasaki-1.68.6/debian/patches/spelling.patch:29: executation ==> execution
data/murasaki-1.68.6/debian/patches/spelling.patch:38: arithmatic ==> arithmetic
data/murasaki-1.68.6/debian/patches/spelling.patch:47: arithmatic ==> arithmetic
data/murasaki-1.68.6/debian/patches/spelling.patch:56: intial ==> initial
data/murasaki-1.68.6/debian/patches/spelling.patch:65: deafult ==> default
data/murasaki-1.68.6/debian/patches/spelling.patch:66: deafult ==> default
data/murasaki-1.68.6/debian/patches/spelling.patch:94: occured ==> occurred
data/murasaki-1.68.6/debian/patches/spelling.patch:105: unitilized ==> uninitialized
data/murasaki-1.68.6/debian/patches/spelling.patch:114: executation ==> execution
data/murasaki-1.68.6/debian/patches/spelling.patch:123: executation ==> execution
data/murasaki-1.68.6/debian/patches/spelling.patch:132: arithmatic ==> arithmetic
data/murasaki-1.68.6/debian/patches/spelling.patch:141: arithmatic ==> arithmetic
data/murasaki-1.68.6/debian/patches/spelling.patch:150: deafult ==> default
data/murasaki-1.68.6/debian/patches/spelling.patch:177: occured ==> occurred
data/murasaki-1.68.6/debian/patches/spelling.patch:188: unitilized ==> uninitialized
data/murasaki-1.68.6/debian/patches/spelling.patch:197: executation ==> execution
data/murasaki-1.68.6/debian/patches/spelling.patch:206: executation ==> execution
data/murasaki-1.68.6/debian/patches/spelling.patch:215: arithmatic ==> arithmetic
data/murasaki-1.68.6/debian/patches/spelling.patch:224: arithmatic ==> arithmetic
data/murasaki-1.68.6/debian/patches/spelling.patch:233: deafult ==> default
data/murasaki-1.68.6/debian/patches/spelling.patch:260: occured ==> occurred
data/murasaki-1.68.6/debian/patches/spelling.patch:271: unitilized ==> uninitialized
data/murasaki-1.68.6/debian/patches/spelling.patch:280: executation ==> execution
data/murasaki-1.68.6/debian/patches/spelling.patch:289: executation ==> execution
data/murasaki-1.68.6/debian/patches/spelling.patch:298: arithmatic ==> arithmetic
data/murasaki-1.68.6/debian/patches/spelling.patch:307: arithmatic ==> arithmetic
data/murasaki-1.68.6/debian/patches/spelling.patch:316: deafult ==> default
data/murasaki-1.68.6/debian/patches/spelling.patch:325: touple ==> tuple
data/murasaki-1.68.6/debian/patches/spelling.patch:343: occured ==> occurred
data/murasaki-1.68.6/debian/patches/spelling.patch:354: accomodate ==> accommodate
data/murasaki-1.68.6/debian/patches/spelling.patch:365: deafult ==> default
data/murasaki-1.68.6/debian/patches/spelling.patch:387: permissable ==> permissible
data/murasaki-1.68.6/.pc/use_proper_libboost_names.patch/src/Makefile:108: requierd ==> required
data/murasaki-1.68.6/.pc/include_libpstream.patch/src/Makefile:106: requierd ==> required
data/murasaki-1.68.6/.pc/hardening.patch/src/Makefile:107: requierd ==> required
data/murasaki-1.68.6/.pc/spelling.patch/filter.pl:48: fpr ==> for, far, fps
data/murasaki-1.68.6/.pc/spelling.patch/filter.pl:505: isnt ==> isn't
data/murasaki-1.68.6/.pc/spelling.patch/filter.pl:540: cant ==> can't
data/murasaki-1.68.6/.pc/spelling.patch/filter.pl:568: hist ==> heist, his
data/murasaki-1.68.6/.pc/spelling.patch/filter.pl:571: hist ==> heist, his
data/murasaki-1.68.6/.pc/spelling.patch/filter.pl:573: hist ==> heist, his
data/murasaki-1.68.6/.pc/spelling.patch/filter.pl:949: hist ==> heist, his
data/murasaki-1.68.6/.pc/spelling.patch/filter.pl:955: doesnt ==> doesn't, does not
data/murasaki-1.68.6/.pc/spelling.patch/filter.pl:979: hist ==> heist, his
data/murasaki-1.68.6/.pc/spelling.patch/filter.pl:984: hist ==> heist, his
data/murasaki-1.68.6/.pc/spelling.patch/filter.pl:1003: hist ==> heist, his
data/murasaki-1.68.6/.pc/spelling.patch/filter.pl:1012: hist ==> heist, his
data/murasaki-1.68.6/.pc/spelling.patch/filter.pl:1012: hist ==> heist, his
data/murasaki-1.68.6/.pc/spelling.patch/filter.pl:1364: intial ==> initial
data/murasaki-1.68.6/.pc/spelling.patch/filter.pl:1376: didnt ==> didn't
data/murasaki-1.68.6/.pc/spelling.patch/filter.pl:1403: wee ==> we
data/murasaki-1.68.6/.pc/spelling.patch/filter.pl:1436: MONKIES ==> MONKEYS
data/murasaki-1.68.6/.pc/spelling.patch/filter.pl:1440: MONKIES ==> MONKEYS
data/murasaki-1.68.6/.pc/spelling.patch/filter.pl:1702: indicies ==> indices
data/murasaki-1.68.6/.pc/spelling.patch/filter.pl:1712: hsa ==> has
data/murasaki-1.68.6/.pc/spelling.patch/filter.pl:1713: hsa ==> has
data/murasaki-1.68.6/.pc/spelling.patch/simpal.pl:275: permissable ==> permissible
data/murasaki-1.68.6/.pc/spelling.patch/doc/murasaki.1:196: unitilized ==> uninitialized
data/murasaki-1.68.6/.pc/spelling.patch/doc/murasaki.1:207: executation ==> execution
data/murasaki-1.68.6/.pc/spelling.patch/doc/murasaki.1:219: executation ==> execution
data/murasaki-1.68.6/.pc/spelling.patch/doc/murasaki.1:303: eachother ==> each other
data/murasaki-1.68.6/.pc/spelling.patch/doc/murasaki.1:341: arithmatic ==> arithmetic
data/murasaki-1.68.6/.pc/spelling.patch/doc/murasaki.1:363: arithmatic ==> arithmetic
data/murasaki-1.68.6/.pc/spelling.patch/doc/murasaki.1:524: intial ==> initial
data/murasaki-1.68.6/.pc/spelling.patch/doc/murasaki.1:556: deafult ==> default
data/murasaki-1.68.6/.pc/spelling.patch/doc/murasaki.1:557: deafult ==> default
data/murasaki-1.68.6/.pc/spelling.patch/doc/murasaki.1:631: touple ==> tuple
data/murasaki-1.68.6/.pc/spelling.patch/doc/murasaki.1:702: occured ==> occurred
data/murasaki-1.68.6/.pc/spelling.patch/doc/murasaki.html:143: unitilized ==> uninitialized
data/murasaki-1.68.6/.pc/spelling.patch/doc/murasaki.html:155: executation ==> execution
data/murasaki-1.68.6/.pc/spelling.patch/doc/murasaki.html:168: executation ==> execution
data/murasaki-1.68.6/.pc/spelling.patch/doc/murasaki.html:269: eachother ==> each other
data/murasaki-1.68.6/.pc/spelling.patch/doc/murasaki.html:329: arithmatic ==> arithmetic
data/murasaki-1.68.6/.pc/spelling.patch/doc/murasaki.html:360: arithmatic ==> arithmetic
data/murasaki-1.68.6/.pc/spelling.patch/doc/murasaki.html:570: intial ==> initial
data/murasaki-1.68.6/.pc/spelling.patch/doc/murasaki.html:609: deafult ==> default
data/murasaki-1.68.6/.pc/spelling.patch/doc/murasaki.html:700: touple ==> tuple
data/murasaki-1.68.6/.pc/spelling.patch/doc/murasaki.html:767: occured ==> occurred
data/murasaki-1.68.6/.pc/spelling.patch/doc/murasaki.pod:68: unitilized ==> uninitialized
data/murasaki-1.68.6/.pc/spelling.patch/doc/murasaki.pod:80: executation ==> execution
data/murasaki-1.68.6/.pc/spelling.patch/doc/murasaki.pod:93: executation ==> execution
data/murasaki-1.68.6/.pc/spelling.patch/doc/murasaki.pod:187: eachother ==> each other
data/murasaki-1.68.6/.pc/spelling.patch/doc/murasaki.pod:236: arithmatic ==> arithmetic
data/murasaki-1.68.6/.pc/spelling.patch/doc/murasaki.pod:263: arithmatic ==> arithmetic
data/murasaki-1.68.6/.pc/spelling.patch/doc/murasaki.pod:452: intial ==> initial
data/murasaki-1.68.6/.pc/spelling.patch/doc/murasaki.pod:489: deafult ==> default
data/murasaki-1.68.6/.pc/spelling.patch/doc/murasaki.pod:580: touple ==> tuple
data/murasaki-1.68.6/.pc/spelling.patch/doc/murasaki.pod:651: occured ==> occurred
data/murasaki-1.68.6/.pc/spelling.patch/doc/murasaki.txt:61: unitilized ==> uninitialized
data/murasaki-1.68.6/.pc/spelling.patch/doc/murasaki.txt:72: executation ==> execution
data/murasaki-1.68.6/.pc/spelling.patch/doc/murasaki.txt:84: executation ==> execution
data/murasaki-1.68.6/.pc/spelling.patch/doc/murasaki.txt:162: eachother ==> each other
data/murasaki-1.68.6/.pc/spelling.patch/doc/murasaki.txt:203: arithmatic ==> arithmetic
data/murasaki-1.68.6/.pc/spelling.patch/doc/murasaki.txt:224: arithmatic ==> arithmetic
data/murasaki-1.68.6/.pc/spelling.patch/doc/murasaki.txt:349: intial ==> initial
data/murasaki-1.68.6/.pc/spelling.patch/doc/murasaki.txt:375: deafult ==> default
data/murasaki-1.68.6/.pc/spelling.patch/doc/murasaki.txt:431: touple ==> tuple
data/murasaki-1.68.6/.pc/spelling.patch/doc/murasaki.txt:496: occured ==> occurred
data/murasaki-1.68.6/.pc/spelling.patch/src/murasaki.cc:179: procesing ==> processing
data/murasaki-1.68.6/.pc/spelling.patch/src/murasaki.cc:306: accomodate ==> accommodate
data/murasaki-1.68.6/.pc/spelling.patch/src/murasaki.cc:567: monkies ==> monkeys
data/murasaki-1.68.6/.pc/spelling.patch/src/murasaki.cc:1322: Dettaching ==> Detaching
data/murasaki-1.68.6/.pc/spelling.patch/src/options.cc:600: Invaild ==> Invalid
data/murasaki-1.68.6/.pc/spelling.patch/src/options.cc:878: eachother ==> each other
data/murasaki-1.68.6/.pc/spelling.patch/src/options.cc:933: deafult ==> default
data/murasaki-1.68.6/.pc/man_syntax.patch/substitch.pl:136: nothin ==> nothing
data/murasaki-1.68.6/.pc/gcc-6.patch/src/sequence.cc:963: wee ==> we
data/murasaki-1.68.6/.pc/gcc-6.patch/src/sequence.cc:1271: metdata ==> metadata
data/murasaki-1.68.6/.pc/gcc-6.patch/src/sequence.cc:1305: synching ==> syncing
data/murasaki-1.68.6/.pc/gcc-6.patch/src/sequence.cc:2401: BA ==> BY, BE
data/murasaki-1.68.6/.pc/gcc-6.patch/src/sequence.cc:2981: isnt ==> isn't
data/murasaki-1.68.6/.pc/fix_mpi.patch/src/murasaki_mpi.cc:667: borken ==> broken