data/neobio-0.0.20030929/src/neobio/textui/NeoBio.java:43: follwing ==> following
data/neobio-0.0.20030929/src/neobio/textui/RandomSequenceGenerator.java:49: ommited ==> omitted
data/neobio-0.0.20030929/src/neobio/textui/RandomSequenceGenerator.java:145: ommited ==> omitted
data/neobio-0.0.20030929/src/neobio/textui/RandomSequenceGenerator.java:150: alocate ==> allocate
data/neobio-0.0.20030929/src/neobio/textui/RandomSequenceGenerator.java:162: writen ==> written
data/neobio-0.0.20030929/src/neobio/textui/RandomSequenceGenerator.java:199: ommited ==> omitted
data/neobio-0.0.20030929/src/neobio/textui/RandomFactorSequenceGenerator.java:50: ommited ==> omitted
data/neobio-0.0.20030929/src/neobio/textui/RandomFactorSequenceGenerator.java:147: ommited ==> omitted
data/neobio-0.0.20030929/src/neobio/textui/RandomFactorSequenceGenerator.java:152: alocate ==> allocate
data/neobio-0.0.20030929/src/neobio/textui/RandomFactorSequenceGenerator.java:155: alocate ==> allocate
data/neobio-0.0.20030929/src/neobio/textui/RandomFactorSequenceGenerator.java:156: greather ==> greater
data/neobio-0.0.20030929/src/neobio/textui/RandomFactorSequenceGenerator.java:175: writen ==> written
data/neobio-0.0.20030929/src/neobio/textui/RandomFactorSequenceGenerator.java:189: writen ==> written
data/neobio-0.0.20030929/src/neobio/textui/RandomFactorSequenceGenerator.java:230: ommited ==> omitted
data/neobio-0.0.20030929/src/neobio/alignment/PairwiseAlignment.java:80: comparsion ==> comparison
data/neobio-0.0.20030929/src/neobio/alignment/FactorSequence.java:40: enconded ==> encoded
data/neobio-0.0.20030929/src/neobio/alignment/PairwiseAlignmentAlgorithm.java:183: wether ==> weather, whether
data/neobio-0.0.20030929/src/neobio/alignment/PairwiseAlignmentAlgorithm.java:207: appropiate ==> appropriate
data/neobio-0.0.20030929/src/neobio/alignment/PairwiseAlignmentAlgorithm.java:346: methid ==> method
data/neobio-0.0.20030929/src/neobio/alignment/PairwiseAlignmentAlgorithm.java:355: methid ==> method
data/neobio-0.0.20030929/src/neobio/alignment/PairwiseAlignmentAlgorithm.java:368: methid ==> method
data/neobio-0.0.20030929/src/neobio/alignment/CharSequence.java:93: conver ==> convert
data/neobio-0.0.20030929/src/neobio/alignment/CharSequence.java:133: convinient ==> convenient
data/neobio-0.0.20030929/src/neobio/alignment/Trie.java:65: familiy ==> family
data/neobio-0.0.20030929/src/neobio/alignment/CrochemoreLandauZivUkelson.java:60: familiy ==> family
data/neobio-0.0.20030929/src/neobio/alignment/CrochemoreLandauZivUkelson.java:70: beteween ==> between
data/neobio-0.0.20030929/src/neobio/alignment/CrochemoreLandauZivUkelson.java:149: clasical ==> classical
data/neobio-0.0.20030929/src/neobio/alignment/CrochemoreLandauZivUkelson.java:154: extremly ==> extremely
data/neobio-0.0.20030929/src/neobio/alignment/CrochemoreLandauZivUkelson.java:550: substracted ==> subtracted
data/neobio-0.0.20030929/src/neobio/alignment/ScoringMatrix.java:351: instace ==> instance
data/neobio-0.0.20030929/src/neobio/alignment/OutMatrix.java:36: enconde ==> encode
data/neobio-0.0.20030929/doc/index-all.html:650: instace ==> instance
data/neobio-0.0.20030929/doc/index-all.html:1364: wether ==> weather, whether
data/neobio-0.0.20030929/doc/neobio/textui/RandomFactorSequenceGenerator.html:96: ommited ==> omitted
data/neobio-0.0.20030929/doc/neobio/textui/RandomSequenceGenerator.html:95: ommited ==> omitted
data/neobio-0.0.20030929/doc/neobio/textui/NeoBio.html:91: follwing ==> following
data/neobio-0.0.20030929/doc/neobio/alignment/ScoringMatrix.html:249: instace ==> instance
data/neobio-0.0.20030929/doc/neobio/alignment/ScoringMatrix.html:540: instace ==> instance
data/neobio-0.0.20030929/doc/neobio/alignment/CharSequence.html:295: convinient ==> convenient
data/neobio-0.0.20030929/doc/neobio/alignment/PairwiseAlignmentAlgorithm.html:395: wether ==> weather, whether
data/neobio-0.0.20030929/doc/neobio/alignment/PairwiseAlignmentAlgorithm.html:631: wether ==> weather, whether
data/neobio-0.0.20030929/doc/neobio/alignment/PairwiseAlignmentAlgorithm.html:661: appropiate ==> appropriate
data/neobio-0.0.20030929/doc/neobio/alignment/PairwiseAlignmentAlgorithm.html:761: methid ==> method
data/neobio-0.0.20030929/doc/neobio/alignment/PairwiseAlignmentAlgorithm.html:777: methid ==> method
data/neobio-0.0.20030929/doc/neobio/alignment/PairwiseAlignmentAlgorithm.html:797: methid ==> method
data/neobio-0.0.20030929/doc/neobio/alignment/Trie.html:117: familiy ==> family
data/neobio-0.0.20030929/doc/neobio/alignment/CrochemoreLandauZivUkelson.html:114: familiy ==> family
data/neobio-0.0.20030929/doc/neobio/alignment/CrochemoreLandauZivUkelson.html:124: beteween ==> between
data/neobio-0.0.20030929/doc/neobio/alignment/CrochemoreLandauZivUkelson.html:203: clasical ==> classical
data/neobio-0.0.20030929/doc/neobio/alignment/CrochemoreLandauZivUkelson.html:208: extremly ==> extremely
data/neobio-0.0.20030929/doc/neobio/alignment/package-summary.html:247: similary ==> similarly
data/neobio-0.0.20030929/doc/neobio/alignment/PairwiseAlignment.html:133: comparsion ==> comparison
data/neobio-0.0.20030929/doc/neobio/alignment/OutMatrix.html:91: enconde ==> encode
data/neobio-0.0.20030929/doc/neobio/alignment/FactorSequence.html:88: enconded ==> encoded
data/neobio-0.0.20030929/doc/src-html/neobio/textui/RandomFactorSequenceGenerator.html:53: ommited ==> omitted
data/neobio-0.0.20030929/doc/src-html/neobio/textui/RandomFactorSequenceGenerator.html:150: ommited ==> omitted
data/neobio-0.0.20030929/doc/src-html/neobio/textui/RandomFactorSequenceGenerator.html:155: alocate ==> allocate
data/neobio-0.0.20030929/doc/src-html/neobio/textui/RandomFactorSequenceGenerator.html:158: alocate ==> allocate
data/neobio-0.0.20030929/doc/src-html/neobio/textui/RandomFactorSequenceGenerator.html:159: greather ==> greater
data/neobio-0.0.20030929/doc/src-html/neobio/textui/RandomFactorSequenceGenerator.html:178: writen ==> written
data/neobio-0.0.20030929/doc/src-html/neobio/textui/RandomFactorSequenceGenerator.html:192: writen ==> written
data/neobio-0.0.20030929/doc/src-html/neobio/textui/RandomFactorSequenceGenerator.html:233: ommited ==> omitted
data/neobio-0.0.20030929/doc/src-html/neobio/textui/RandomSequenceGenerator.html:52: ommited ==> omitted
data/neobio-0.0.20030929/doc/src-html/neobio/textui/RandomSequenceGenerator.html:148: ommited ==> omitted
data/neobio-0.0.20030929/doc/src-html/neobio/textui/RandomSequenceGenerator.html:153: alocate ==> allocate
data/neobio-0.0.20030929/doc/src-html/neobio/textui/RandomSequenceGenerator.html:165: writen ==> written
data/neobio-0.0.20030929/doc/src-html/neobio/textui/RandomSequenceGenerator.html:202: ommited ==> omitted
data/neobio-0.0.20030929/doc/src-html/neobio/textui/NeoBio.html:46: follwing ==> following
data/neobio-0.0.20030929/doc/src-html/neobio/alignment/ScoringMatrix.html:354: instace ==> instance
data/neobio-0.0.20030929/doc/src-html/neobio/alignment/CharSequence.html:96: conver ==> convert
data/neobio-0.0.20030929/doc/src-html/neobio/alignment/CharSequence.html:136: convinient ==> convenient
data/neobio-0.0.20030929/doc/src-html/neobio/alignment/PairwiseAlignmentAlgorithm.html:186: wether ==> weather, whether
data/neobio-0.0.20030929/doc/src-html/neobio/alignment/PairwiseAlignmentAlgorithm.html:210: appropiate ==> appropriate
data/neobio-0.0.20030929/doc/src-html/neobio/alignment/PairwiseAlignmentAlgorithm.html:349: methid ==> method
data/neobio-0.0.20030929/doc/src-html/neobio/alignment/PairwiseAlignmentAlgorithm.html:358: methid ==> method
data/neobio-0.0.20030929/doc/src-html/neobio/alignment/PairwiseAlignmentAlgorithm.html:371: methid ==> method
data/neobio-0.0.20030929/doc/src-html/neobio/alignment/Trie.html:68: familiy ==> family
data/neobio-0.0.20030929/doc/src-html/neobio/alignment/CrochemoreLandauZivUkelson.html:63: familiy ==> family
data/neobio-0.0.20030929/doc/src-html/neobio/alignment/CrochemoreLandauZivUkelson.html:73: beteween ==> between
data/neobio-0.0.20030929/doc/src-html/neobio/alignment/CrochemoreLandauZivUkelson.html:152: clasical ==> classical
data/neobio-0.0.20030929/doc/src-html/neobio/alignment/CrochemoreLandauZivUkelson.html:157: extremly ==> extremely
data/neobio-0.0.20030929/doc/src-html/neobio/alignment/CrochemoreLandauZivUkelson.html:553: substracted ==> subtracted
data/neobio-0.0.20030929/doc/src-html/neobio/alignment/PairwiseAlignment.html:83: comparsion ==> comparison
data/neobio-0.0.20030929/doc/src-html/neobio/alignment/OutMatrix.html:39: enconde ==> encode
data/neobio-0.0.20030929/doc/src-html/neobio/alignment/FactorSequence.html:43: enconded ==> encoded