data/proftmb-1.1.12/ChangeLog:34: secion ==> section data/proftmb-1.1.12/input/ModelArchitecture:11: UE ==> USE, DUE data/proftmb-1.1.12/input/ModelArchitecture:12: Ue ==> Use, due data/proftmb-1.1.12/input/ModelArchitecture:18: UE ==> USE, DUE data/proftmb-1.1.12/input/ModelArchitecture:19: Ue ==> Use, due data/proftmb-1.1.12/input/ModelArchitecture:25: UE ==> USE, DUE data/proftmb-1.1.12/input/ModelArchitecture:25: Ue ==> Use, due data/proftmb-1.1.12/input/ModelArchitecture:29: Ue ==> Use, due data/proftmb-1.1.12/input/ModelArchitecture:29: UE ==> USE, DUE data/proftmb-1.1.12/input/ModelArchitecture:35: Ue ==> Use, due data/proftmb-1.1.12/input/ModelArchitecture:35: UE ==> USE, DUE data/proftmb-1.1.12/input/ModelArchitecture:45: UE ==> USE, DUE data/proftmb-1.1.12/input/ModelArchitecture:45: Ue ==> Use, due data/proftmb-1.1.12/input/ModelArchitecture:55: UE ==> USE, DUE data/proftmb-1.1.12/input/ModelArchitecture:55: UE ==> USE, DUE data/proftmb-1.1.12/input/ModelArchitecture:56: Ue ==> Use, due data/proftmb-1.1.12/input/ModelArchitecture:56: Ue ==> Use, due data/proftmb-1.1.12/input/StateRedux4:1: Ue ==> Use, due data/proftmb-1.1.12/input/StateRedux4:1: UE ==> USE, DUE data/proftmb-1.1.12/input/Swiss8.arch:11: UE ==> USE, DUE data/proftmb-1.1.12/input/Swiss8.arch:12: Ue ==> Use, due data/proftmb-1.1.12/input/Swiss8.arch:18: UE ==> USE, DUE data/proftmb-1.1.12/input/Swiss8.arch:19: Ue ==> Use, due data/proftmb-1.1.12/input/Swiss8.arch:25: UE ==> USE, DUE data/proftmb-1.1.12/input/Swiss8.arch:25: Ue ==> Use, due data/proftmb-1.1.12/input/Swiss8.arch:29: Ue ==> Use, due data/proftmb-1.1.12/input/Swiss8.arch:29: UE ==> USE, DUE data/proftmb-1.1.12/input/Swiss8.arch:35: Ue ==> Use, due data/proftmb-1.1.12/input/Swiss8.arch:35: UE ==> USE, DUE data/proftmb-1.1.12/input/Swiss8.arch:45: UE ==> USE, DUE data/proftmb-1.1.12/input/Swiss8.arch:45: Ue ==> Use, due data/proftmb-1.1.12/input/Swiss8.arch:55: UE ==> USE, DUE data/proftmb-1.1.12/input/Swiss8.arch:55: UE ==> USE, DUE data/proftmb-1.1.12/input/Swiss8.arch:56: Ue ==> Use, due data/proftmb-1.1.12/input/Swiss8.arch:56: Ue ==> Use, due data/proftmb-1.1.12/src/GradientDescent.cpp:219: emiss ==> remiss, amiss, amass data/proftmb-1.1.12/src/GradientDescent.cpp:245: emiss ==> remiss, amiss, amass data/proftmb-1.1.12/src/GradientDescent.cpp:248: emiss ==> remiss, amiss, amass data/proftmb-1.1.12/src/GradientDescent.cpp:251: emiss ==> remiss, amiss, amass data/proftmb-1.1.12/src/GradientDescent.cpp:254: emiss ==> remiss, amiss, amass data/proftmb-1.1.12/src/GradientDescent.cpp:263: emiss ==> remiss, amiss, amass data/proftmb-1.1.12/src/GradientDescent.cpp:264: emiss ==> remiss, amiss, amass data/proftmb-1.1.12/src/HMMEval.cpp:8: spred ==> spread data/proftmb-1.1.12/src/HMMEval.cpp:10: spred ==> spread data/proftmb-1.1.12/src/HMMEval.cpp:11: spred ==> spread data/proftmb-1.1.12/src/Krogh1Best.cpp:49: ND ==> AND, 2ND data/proftmb-1.1.12/src/Krogh1Best.cpp:52: ND ==> AND, 2ND data/proftmb-1.1.12/src/Krogh1Best.cpp:53: ND ==> AND, 2ND data/proftmb-1.1.12/src/Krogh1Best.cpp:54: ND ==> AND, 2ND data/proftmb-1.1.12/src/Krogh1Best.cpp:57: ND ==> AND, 2ND data/proftmb-1.1.12/src/Krogh1Best.cpp:65: ND ==> AND, 2ND data/proftmb-1.1.12/src/Krogh1Best.cpp:68: ND ==> AND, 2ND data/proftmb-1.1.12/src/Krogh1Best.cpp:74: ND ==> AND, 2ND data/proftmb-1.1.12/src/Krogh1Best.cpp:79: ND ==> AND, 2ND data/proftmb-1.1.12/src/Krogh1Best.cpp:91: ND ==> AND, 2ND data/proftmb-1.1.12/src/Krogh1Best.cpp:92: ND ==> AND, 2ND data/proftmb-1.1.12/src/Krogh1Best.cpp:93: ND ==> AND, 2ND data/proftmb-1.1.12/src/Krogh1Best.cpp:93: ND ==> AND, 2ND data/proftmb-1.1.12/src/Krogh1Best.cpp:96: ND ==> AND, 2ND data/proftmb-1.1.12/src/Krogh1Best.cpp:104: ND ==> AND, 2ND data/proftmb-1.1.12/src/Krogh1Best.cpp:118: ND ==> AND, 2ND data/proftmb-1.1.12/src/Krogh1Best.cpp:133: ND ==> AND, 2ND data/proftmb-1.1.12/src/Krogh1Best.cpp:145: ND ==> AND, 2ND data/proftmb-1.1.12/src/Krogh1Best.cpp:149: ND ==> AND, 2ND data/proftmb-1.1.12/src/Krogh1Best.cpp:150: ND ==> AND, 2ND data/proftmb-1.1.12/debian/tests/installation-test:26: existance ==> existence