data/r-bioc-pwmenrich-4.26.0/R/PWMBackground-methods.R:130: indicies ==> indices
data/r-bioc-pwmenrich-4.26.0/R/PWMBackground-methods.R:161: indicies ==> indices
data/r-bioc-pwmenrich-4.26.0/R/PWMBackground-methods.R:181: indicies ==> indices
data/r-bioc-pwmenrich-4.26.0/R/PWMBackground-methods.R:202: indicies ==> indices
data/r-bioc-pwmenrich-4.26.0/R/background.R:122: neccessary ==> necessary
data/r-bioc-pwmenrich-4.26.0/R/background.R:562: neccessary ==> necessary
data/r-bioc-pwmenrich-4.26.0/R/background.R:642: explicitely ==> explicitly
data/r-bioc-pwmenrich-4.26.0/R/background.R:703: preform ==> perform
data/r-bioc-pwmenrich-4.26.0/R/background.R:745: explicitely ==> explicitly
data/r-bioc-pwmenrich-4.26.0/R/background.R:807: preform ==> perform
data/r-bioc-pwmenrich-4.26.0/R/options.R:34: abount ==> about
data/r-bioc-pwmenrich-4.26.0/R/plot.R:32: mulitple ==> multiple
data/r-bioc-pwmenrich-4.26.0/R/plot.R:187: unneccessary ==> unnecessary
data/r-bioc-pwmenrich-4.26.0/R/plot.R:305: occurances ==> occurrences
data/r-bioc-pwmenrich-4.26.0/R/plot.R:381: PLOTING ==> PLOTTING
data/r-bioc-pwmenrich-4.26.0/R/pwm.R:125: ans ==> and
data/r-bioc-pwmenrich-4.26.0/R/pwm.R:128: ans ==> and
data/r-bioc-pwmenrich-4.26.0/R/pwm.R:133: ans ==> and
data/r-bioc-pwmenrich-4.26.0/R/pwm.R:133: ans ==> and
data/r-bioc-pwmenrich-4.26.0/R/pwm.R:136: ans ==> and
data/r-bioc-pwmenrich-4.26.0/R/pwm.R:1044: Uknown ==> Unknown
data/r-bioc-pwmenrich-4.26.0/R/pwm.R:1084: perfom ==> perform
data/r-bioc-pwmenrich-4.26.0/R/pwm.R:1086: Perfoming ==> Performing
data/r-bioc-pwmenrich-4.26.0/R/pwm.R:1277: actualy ==> actually
data/r-bioc-pwmenrich-4.26.0/R/pwm.R:1302: seperate ==> separate
data/r-bioc-pwmenrich-4.26.0/R/pwm.R:1509: asssumes ==> assumes
data/r-bioc-pwmenrich-4.26.0/R/pwm.R:1528: asssumes ==> assumes
data/r-bioc-pwmenrich-4.26.0/R/readData.R:105: indicies ==> indices
data/r-bioc-pwmenrich-4.26.0/R/similarity.R:97: idential ==> identical
data/r-bioc-pwmenrich-4.26.0/inst/NEWS:29: documenation ==> documentation
data/r-bioc-pwmenrich-4.26.0/inst/doc/PWMEnrich.Rnw:148: hight ==> height, high
data/r-bioc-pwmenrich-4.26.0/inst/tests/test_motifEnrichment.R:60: diferent ==> different
data/r-bioc-pwmenrich-4.26.0/man/getBackgroundFrequencies.Rd:16: preform ==> perform
data/r-bioc-pwmenrich-4.26.0/man/makeBackground.Rd:34: preform ==> perform
data/r-bioc-pwmenrich-4.26.0/man/motifPrAUC.Rd:13: asssumes ==> assumes
data/r-bioc-pwmenrich-4.26.0/man/motifRecoveryAUC.Rd:13: asssumes ==> assumes
data/r-bioc-pwmenrich-4.26.0/man/motifSimilarity.Rd:25: idential ==> identical
data/r-bioc-pwmenrich-4.26.0/man/plotMotifScores.Rd:61: occurances ==> occurrences
data/r-bioc-pwmenrich-4.26.0/man/plotMultipleMotifs.Rd:5: mulitple ==> multiple
data/r-bioc-pwmenrich-4.26.0/man/seqLogoGrid.Rd:44: unneccessary ==> unnecessary
data/r-bioc-pwmenrich-4.26.0/man/subsetting-PWMCutoffBackground.Rd:12: indicies ==> indices
data/r-bioc-pwmenrich-4.26.0/man/subsetting-PWMEmpiricalBackground.Rd:12: indicies ==> indices
data/r-bioc-pwmenrich-4.26.0/man/subsetting-PWMGEVBackground.Rd:12: indicies ==> indices
data/r-bioc-pwmenrich-4.26.0/man/subsetting-PWMLognBackground.Rd:12: indicies ==> indices
data/r-bioc-pwmenrich-4.26.0/man/useBigMemoryPWMEnrich.Rd:5: abount ==> about
data/r-bioc-pwmenrich-4.26.0/man/useBigMemoryPWMEnrich.Rd:13: abount ==> about
data/r-bioc-pwmenrich-4.26.0/vignettes/PWMEnrich.Rnw:148: hight ==> height, high