data/hmmer2-2.3.2+dfsg/src/debug.c: C source, ASCII text data/hmmer2-2.3.2+dfsg/src/hmmconvert.c: C source, ASCII text data/hmmer2-2.3.2+dfsg/src/display.c: C source, ASCII text data/hmmer2-2.3.2+dfsg/src/histogram.c: C source, ASCII text data/hmmer2-2.3.2+dfsg/src/pvm.c: C source, ASCII text data/hmmer2-2.3.2+dfsg/src/fast_algorithms.c: C source, ASCII text data/hmmer2-2.3.2+dfsg/src/hmmalign.c: C source, ASCII text data/hmmer2-2.3.2+dfsg/src/structs.h: C source, ASCII text data/hmmer2-2.3.2+dfsg/src/emulation.c: C source, ASCII text data/hmmer2-2.3.2+dfsg/src/tophits.c: C source, ASCII text data/hmmer2-2.3.2+dfsg/src/masks.c: C source, ASCII text data/hmmer2-2.3.2+dfsg/src/threads.c: C source, ASCII text data/hmmer2-2.3.2+dfsg/src/hmmpostal.c: C source, ASCII text data/hmmer2-2.3.2+dfsg/src/hmmcalibrate.c: C source, ASCII text data/hmmer2-2.3.2+dfsg/src/hmmindex.c: C source, ASCII text data/hmmer2-2.3.2+dfsg/src/emit.c: C source, ASCII text data/hmmer2-2.3.2+dfsg/src/hmmsearch.c: C source, ASCII text data/hmmer2-2.3.2+dfsg/src/hmmbuild.c: C source, ASCII text data/hmmer2-2.3.2+dfsg/src/trace.c: C source, ASCII text data/hmmer2-2.3.2+dfsg/src/misc.c: C source, ASCII text data/hmmer2-2.3.2+dfsg/src/weetest.c: C source, ASCII text data/hmmer2-2.3.2+dfsg/src/modelmakers.c: C source, ASCII text data/hmmer2-2.3.2+dfsg/src/alphabet.c: C source, ASCII text data/hmmer2-2.3.2+dfsg/src/states.c: C source, ASCII text data/hmmer2-2.3.2+dfsg/src/hmmemit.c: C source, ASCII text data/hmmer2-2.3.2+dfsg/src/core_algorithms.c: C source, ASCII text data/hmmer2-2.3.2+dfsg/src/hmmio.c: C source, ASCII text data/hmmer2-2.3.2+dfsg/src/globals.h: ASCII text data/hmmer2-2.3.2+dfsg/src/hmmsearch-pvm.c: C source, ASCII text data/hmmer2-2.3.2+dfsg/src/hmmcalibrate-pvm.c: C source, ASCII text data/hmmer2-2.3.2+dfsg/src/hmmpfam.c: C source, ASCII text data/hmmer2-2.3.2+dfsg/src/plan7.c: C source, ASCII text data/hmmer2-2.3.2+dfsg/src/plan9.c: C source, ASCII text data/hmmer2-2.3.2+dfsg/src/hmmfetch.c: C source, ASCII text data/hmmer2-2.3.2+dfsg/src/camJul97.c: C source, ASCII text data/hmmer2-2.3.2+dfsg/src/hmmpfam-pvm.c: C source, ASCII text data/hmmer2-2.3.2+dfsg/src/postprob.c: C source, ASCII text data/hmmer2-2.3.2+dfsg/src/postprob.h: C source, ASCII text, with CRLF line terminators data/hmmer2-2.3.2+dfsg/src/prior.c: C source, ASCII text data/hmmer2-2.3.2+dfsg/src/funcs.h: C source, ASCII text data/hmmer2-2.3.2+dfsg/src/mathsupport.c: C source, ASCII text data/hmmer2-2.3.2+dfsg/src/config.h.in: C source, ASCII text data/hmmer2-2.3.2+dfsg/src/Makefile.in: makefile script, ASCII text data/hmmer2-2.3.2+dfsg/LICENSE: ASCII text data/hmmer2-2.3.2+dfsg/config.guess: POSIX shell script, ASCII text executable data/hmmer2-2.3.2+dfsg/install-sh: POSIX shell script, ASCII text executable data/hmmer2-2.3.2+dfsg/config.sub: POSIX shell script, ASCII text executable data/hmmer2-2.3.2+dfsg/documentation/man/hmmalign.man: troff or preprocessor input, ASCII text data/hmmer2-2.3.2+dfsg/documentation/man/hmmcalibrate.man: troff or preprocessor input, ASCII text data/hmmer2-2.3.2+dfsg/documentation/man/hmmconvert.man: troff or preprocessor input, ASCII text data/hmmer2-2.3.2+dfsg/documentation/man/hmmemit.man: troff or preprocessor input, ASCII text data/hmmer2-2.3.2+dfsg/documentation/man/hmmfetch.man: troff or preprocessor input, ASCII text data/hmmer2-2.3.2+dfsg/documentation/man/hmmindex.man: troff or preprocessor input, ASCII text data/hmmer2-2.3.2+dfsg/documentation/man/hmmpfam.man: troff or preprocessor input, ASCII text data/hmmer2-2.3.2+dfsg/documentation/man/hmmsearch.man: troff or preprocessor input, ASCII text data/hmmer2-2.3.2+dfsg/documentation/man/hmmer.man: troff or preprocessor input, ASCII text data/hmmer2-2.3.2+dfsg/documentation/man/hmmbuild.man: troff or preprocessor input, ASCII text data/hmmer2-2.3.2+dfsg/tutorial/pkinase.sto: ASCII text data/hmmer2-2.3.2+dfsg/tutorial/nucleic.pri: ASCII text data/hmmer2-2.3.2+dfsg/tutorial/nucleic.null: ASCII text data/hmmer2-2.3.2+dfsg/tutorial/Artemia.fa: ASCII text data/hmmer2-2.3.2+dfsg/tutorial/rrm.hmm: ASCII text data/hmmer2-2.3.2+dfsg/tutorial/rrm.sto: ASCII text data/hmmer2-2.3.2+dfsg/tutorial/amino.pri: ASCII text data/hmmer2-2.3.2+dfsg/tutorial/fn3.sto: ASCII text data/hmmer2-2.3.2+dfsg/tutorial/globins50.msf: ASCII text data/hmmer2-2.3.2+dfsg/tutorial/globins630.fa: ASCII text data/hmmer2-2.3.2+dfsg/tutorial/amino.null: ASCII text data/hmmer2-2.3.2+dfsg/testsuite/sqc: Perl script text executable data/hmmer2-2.3.2+dfsg/testsuite/fitting_test.c: C source, ASCII text data/hmmer2-2.3.2+dfsg/testsuite/evd_test.c: C source, ASCII text data/hmmer2-2.3.2+dfsg/testsuite/exercises-pvm.sqc: ASCII text data/hmmer2-2.3.2+dfsg/testsuite/masks_test.c: C source, ASCII text data/hmmer2-2.3.2+dfsg/testsuite/fn3-bin-swap: data data/hmmer2-2.3.2+dfsg/testsuite/README: ASCII text data/hmmer2-2.3.2+dfsg/testsuite/exercises.sqc: ASCII text data/hmmer2-2.3.2+dfsg/testsuite/weeviterbi_test.hmm: ASCII text data/hmmer2-2.3.2+dfsg/testsuite/weeviterbi_test.seq: ASCII text data/hmmer2-2.3.2+dfsg/testsuite/weeviterbi_test.c: C source, ASCII text data/hmmer2-2.3.2+dfsg/testsuite/trace_test.c: C source, ASCII text data/hmmer2-2.3.2+dfsg/testsuite/Optiontests.nslx: ASCII text data/hmmer2-2.3.2+dfsg/testsuite/fn3.seed: ASCII text data/hmmer2-2.3.2+dfsg/testsuite/parsingviterbi_test.c: C source, ASCII text data/hmmer2-2.3.2+dfsg/testsuite/Optiontests.fa: ASCII text data/hmmer2-2.3.2+dfsg/testsuite/tophits_test.c: C source, ASCII text data/hmmer2-2.3.2+dfsg/testsuite/fn3-bin: data data/hmmer2-2.3.2+dfsg/testsuite/fn3.hmm: ASCII text data/hmmer2-2.3.2+dfsg/testsuite/exercises-threaded.sqc: ASCII text data/hmmer2-2.3.2+dfsg/testsuite/trace_test.hmm: ASCII text data/hmmer2-2.3.2+dfsg/testsuite/trace_test.seq: ASCII text data/hmmer2-2.3.2+dfsg/testsuite/trace_test.slx: ASCII text data/hmmer2-2.3.2+dfsg/testsuite/alignalign_test.c: C source, ASCII text data/hmmer2-2.3.2+dfsg/testsuite/test1-conversion.pl: Perl script text executable data/hmmer2-2.3.2+dfsg/testsuite/Optiontests.nfa: ASCII text data/hmmer2-2.3.2+dfsg/testsuite/Optiontests.pam: ASCII text data/hmmer2-2.3.2+dfsg/testsuite/Optiontests.pri: ASCII text data/hmmer2-2.3.2+dfsg/testsuite/Optiontests.slx: ASCII text data/hmmer2-2.3.2+dfsg/testsuite/Optiontests.sto: ASCII text data/hmmer2-2.3.2+dfsg/testsuite/titin.fa: ASCII text data/hmmer2-2.3.2+dfsg/testsuite/viterbi_exercise.c: C source, ASCII text data/hmmer2-2.3.2+dfsg/testsuite/Makefile.in: makefile script, ASCII text data/hmmer2-2.3.2+dfsg/COPYRIGHT: ASCII text data/hmmer2-2.3.2+dfsg/debian/README.Debian: UTF-8 Unicode text data/hmmer2-2.3.2+dfsg/debian/changelog: UTF-8 Unicode text data/hmmer2-2.3.2+dfsg/debian/control: ASCII text data/hmmer2-2.3.2+dfsg/debian/copyright: ASCII text data/hmmer2-2.3.2+dfsg/debian/hmmer2-doc.docs: ASCII text data/hmmer2-2.3.2+dfsg/debian/hmmer2.NEWS: ASCII text data/hmmer2-2.3.2+dfsg/debian/hmmer2.docs: ASCII text data/hmmer2-2.3.2+dfsg/debian/hmmer2.install: ASCII text data/hmmer2-2.3.2+dfsg/debian/hmmer2.links: ASCII text data/hmmer2-2.3.2+dfsg/debian/libhmmer2-dev.install: a /usr/bin/dh-exec script, ASCII text executable data/hmmer2-2.3.2+dfsg/debian/patches/add-runstatedir-option.patch: unified diff output, ASCII text, with very long lines data/hmmer2-2.3.2+dfsg/debian/patches/build_libhmmer.a_with-fPIC.patch: unified diff output, ASCII text data/hmmer2-2.3.2+dfsg/debian/patches/hardening.patch: unified diff output, ASCII text data/hmmer2-2.3.2+dfsg/debian/patches/series: ASCII text data/hmmer2-2.3.2+dfsg/debian/patches/spelling.patch: unified diff output, ASCII text data/hmmer2-2.3.2+dfsg/debian/patches/use_debian_packaged_biosquid.patch: unified diff output, ASCII text data/hmmer2-2.3.2+dfsg/debian/patches/userguidepdf: unified diff output, ASCII text data/hmmer2-2.3.2+dfsg/debian/patches/version2-manpage: unified diff output, ASCII text data/hmmer2-2.3.2+dfsg/debian/pkgconfig/libhmmer2.pc: ASCII text data/hmmer2-2.3.2+dfsg/debian/rules: a /usr/bin/make -f script, ASCII text executable data/hmmer2-2.3.2+dfsg/debian/salsa-ci.yml: ASCII text data/hmmer2-2.3.2+dfsg/debian/source/format: ASCII text data/hmmer2-2.3.2+dfsg/debian/tests/control: ASCII text data/hmmer2-2.3.2+dfsg/debian/tests/run-unit-test: Bourne-Again shell script, ASCII text executable data/hmmer2-2.3.2+dfsg/debian/upstream/metadata: ASCII text data/hmmer2-2.3.2+dfsg/debian/watch: ASCII text data/hmmer2-2.3.2+dfsg/.pc/.version: ASCII text data/hmmer2-2.3.2+dfsg/.pc/.quilt_patches: ASCII text data/hmmer2-2.3.2+dfsg/.pc/.quilt_series: ASCII text data/hmmer2-2.3.2+dfsg/.pc/applied-patches: ASCII text data/hmmer2-2.3.2+dfsg/.pc/version2-manpage/documentation/man/hmmer.man: troff or preprocessor input, ASCII text data/hmmer2-2.3.2+dfsg/.pc/version2-manpage/documentation/man/hmmalign.man: troff or preprocessor input, ASCII text 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input, ASCII text data/hmmer2-2.3.2+dfsg/.pc/userguidepdf/documentation/man/hmmer.man: troff or preprocessor input, ASCII text data/hmmer2-2.3.2+dfsg/.pc/userguidepdf/INSTALL: ASCII text data/hmmer2-2.3.2+dfsg/.pc/userguidepdf/NOTES: ASCII text data/hmmer2-2.3.2+dfsg/.pc/spelling.patch/documentation/man/hmmbuild.man: troff or preprocessor input, ASCII text data/hmmer2-2.3.2+dfsg/.pc/use_debian_packaged_biosquid.patch/src/Makefile.in: makefile script, ASCII text data/hmmer2-2.3.2+dfsg/.pc/use_debian_packaged_biosquid.patch/src/funcs.h: C source, ASCII text data/hmmer2-2.3.2+dfsg/.pc/use_debian_packaged_biosquid.patch/src/mathsupport.c: C source, ASCII text data/hmmer2-2.3.2+dfsg/.pc/use_debian_packaged_biosquid.patch/src/config.h.in: C source, ASCII text data/hmmer2-2.3.2+dfsg/.pc/use_debian_packaged_biosquid.patch/testsuite/Makefile.in: makefile script, ASCII text data/hmmer2-2.3.2+dfsg/.pc/use_debian_packaged_biosquid.patch/configure: POSIX shell script, ASCII text executable, with very long lines data/hmmer2-2.3.2+dfsg/.pc/use_debian_packaged_biosquid.patch/Makefile.in: makefile script, ASCII text data/hmmer2-2.3.2+dfsg/.pc/build_libhmmer.a_with-fPIC.patch/src/Makefile.in: makefile script, ASCII text data/hmmer2-2.3.2+dfsg/.pc/add-runstatedir-option.patch/configure: POSIX shell script, ASCII text executable, with very long lines data/hmmer2-2.3.2+dfsg/00README: ASCII text data/hmmer2-2.3.2+dfsg/INSTALL: ASCII text data/hmmer2-2.3.2+dfsg/NOTES: ASCII text data/hmmer2-2.3.2+dfsg/Makefile.in: makefile script, ASCII text data/hmmer2-2.3.2+dfsg/configure: POSIX shell script, ASCII text executable, with very long lines