data/libbio-tools-phylo-paml-perl-1.7.3/Changes:                                                                ASCII text
data/libbio-tools-phylo-paml-perl-1.7.3/dist.ini:                                                               ASCII text
data/libbio-tools-phylo-paml-perl-1.7.3/LICENSE:                                                                ASCII text
data/libbio-tools-phylo-paml-perl-1.7.3/t/PAML-run.t:                                                           Perl script text executable
data/libbio-tools-phylo-paml-perl-1.7.3/t/author-mojibake.t:                                                    awk or perl script, ASCII text
data/libbio-tools-phylo-paml-perl-1.7.3/t/author-pod-coverage.t:                                                awk or perl script, ASCII text
data/libbio-tools-phylo-paml-perl-1.7.3/t/00-compile.t:                                                         ASCII text
data/libbio-tools-phylo-paml-perl-1.7.3/t/author-no-tabs.t:                                                     awk or perl script, ASCII text
data/libbio-tools-phylo-paml-perl-1.7.3/t/author-pod-syntax.t:                                                  awk or perl script, ASCII text
data/libbio-tools-phylo-paml-perl-1.7.3/t/data/baseml.pairwise:                                                 ASCII text
data/libbio-tools-phylo-paml-perl-1.7.3/t/data/codeml.mlc:                                                      ASCII text
data/libbio-tools-phylo-paml-perl-1.7.3/t/data/codeml_parse.mlc:                                                ASCII text, with very long lines
data/libbio-tools-phylo-paml-perl-1.7.3/t/data/codeml315.mlc:                                                   ASCII text
data/libbio-tools-phylo-paml-perl-1.7.3/t/data/codeml_nan.mlc:                                                  ASCII text
data/libbio-tools-phylo-paml-perl-1.7.3/t/data/yn00.mlc:                                                        ASCII text
data/libbio-tools-phylo-paml-perl-1.7.3/t/data/M0.mlc:                                                          ASCII text
data/libbio-tools-phylo-paml-perl-1.7.3/t/data/codeml45b.mlc:                                                   ASCII text, with very long lines
data/libbio-tools-phylo-paml-perl-1.7.3/t/data/bug3331.mlc:                                                     ASCII text
data/libbio-tools-phylo-paml-perl-1.7.3/t/data/codeml_nssites.mlc:                                              ASCII text, with very long lines
data/libbio-tools-phylo-paml-perl-1.7.3/t/data/cysprot.raxml.tre:                                               ASCII text, with very long lines
data/libbio-tools-phylo-paml-perl-1.7.3/t/data/aaml.mlc:                                                        ASCII text
data/libbio-tools-phylo-paml-perl-1.7.3/t/data/codeml_lysozyme/2NG.dS:                                          ASCII text
data/libbio-tools-phylo-paml-perl-1.7.3/t/data/codeml_lysozyme/2NG.tt:                                          ASCII text
data/libbio-tools-phylo-paml-perl-1.7.3/t/data/codeml_lysozyme/lysozymeSmall.trees:                             ASCII text, with CRLF line terminators
data/libbio-tools-phylo-paml-perl-1.7.3/t/data/codeml_lysozyme/mlc:                                             ASCII text, with very long lines
data/libbio-tools-phylo-paml-perl-1.7.3/t/data/codeml_lysozyme/4fold.nuc:                                       ASCII text
data/libbio-tools-phylo-paml-perl-1.7.3/t/data/codeml_lysozyme/rst1:                                            ASCII text
data/libbio-tools-phylo-paml-perl-1.7.3/t/data/codeml_lysozyme/lysozymeSmall.ctl:                               ASCII text, with CRLF line terminators
data/libbio-tools-phylo-paml-perl-1.7.3/t/data/codeml_lysozyme/lysozymeSmall.txt:                               ASCII text
data/libbio-tools-phylo-paml-perl-1.7.3/t/data/codeml_lysozyme/rst:                                             ASCII text, with very long lines
data/libbio-tools-phylo-paml-perl-1.7.3/t/data/codeml_lysozyme/2NG.dN:                                          ASCII text
data/libbio-tools-phylo-paml-perl-1.7.3/t/data/codeml_lysozyme/rub:                                             ASCII text
data/libbio-tools-phylo-paml-perl-1.7.3/t/data/codeml_lysozyme/lnf:                                             ASCII text
data/libbio-tools-phylo-paml-perl-1.7.3/t/data/aaml_pairwise.mlc:                                               ASCII text
data/libbio-tools-phylo-paml-perl-1.7.3/t/data/codeml43_nssites.mlc:                                            ASCII text
data/libbio-tools-phylo-paml-perl-1.7.3/t/data/yn00_45.mlc:                                                     ASCII text
data/libbio-tools-phylo-paml-perl-1.7.3/t/data/cysprot.msf:                                                     ASCII text
data/libbio-tools-phylo-paml-perl-1.7.3/t/data/gf-s85.phylip:                                                   ASCII text, with very long lines
data/libbio-tools-phylo-paml-perl-1.7.3/t/data/codeml4.mlc:                                                     ASCII text, with very long lines
data/libbio-tools-phylo-paml-perl-1.7.3/t/data/codeml43.mlc:                                                    ASCII text, with very long lines
data/libbio-tools-phylo-paml-perl-1.7.3/t/data/branchSite.mlc:                                                  ASCII text
data/libbio-tools-phylo-paml-perl-1.7.3/t/data/baseml.usertree:                                                 ASCII text
data/libbio-tools-phylo-paml-perl-1.7.3/t/data/test:                                                            cannot open `data/libbio-tools-phylo-paml-perl-1.7.3/t/data/test' (No such file or directory)
2.txt:                                                                                                          cannot open `2.txt' (No such file or directory)
data/libbio-tools-phylo-paml-perl-1.7.3/t/data/singleNSsite.mlc:                                                ASCII text
data/libbio-tools-phylo-paml-perl-1.7.3/t/data/codeml45.mlc:                                                    ASCII text, with very long lines
data/libbio-tools-phylo-paml-perl-1.7.3/t/PAML-parser.t:                                                        Perl script text executable
data/libbio-tools-phylo-paml-perl-1.7.3/t/author-eol.t:                                                         awk or perl script, ASCII text
data/libbio-tools-phylo-paml-perl-1.7.3/META.json:                                                              JSON data
data/libbio-tools-phylo-paml-perl-1.7.3/META.yml:                                                               ASCII text
data/libbio-tools-phylo-paml-perl-1.7.3/MANIFEST:                                                               ASCII text
data/libbio-tools-phylo-paml-perl-1.7.3/lib/Bio/Tools/Phylo/PAML/Codeml.pm:                                     Perl5 module source, ASCII text
data/libbio-tools-phylo-paml-perl-1.7.3/lib/Bio/Tools/Phylo/PAML/ModelResult.pm:                                Perl5 module source, ASCII text
data/libbio-tools-phylo-paml-perl-1.7.3/lib/Bio/Tools/Phylo/PAML/Result.pm:                                     Perl5 module source, ASCII text
data/libbio-tools-phylo-paml-perl-1.7.3/lib/Bio/Tools/Phylo/PAML.pm:                                            Perl5 module source, ASCII text
data/libbio-tools-phylo-paml-perl-1.7.3/lib/Bio/Tools/Run/Phylo/PAML/Codeml.pm:                                 Perl5 module source, ASCII text
data/libbio-tools-phylo-paml-perl-1.7.3/lib/Bio/Tools/Run/Phylo/PAML/Yn00.pm:                                   Perl5 module source, ASCII text
data/libbio-tools-phylo-paml-perl-1.7.3/lib/Bio/Tools/Run/Phylo/PAML/Baseml.pm:                                 Perl5 module source, ASCII text
data/libbio-tools-phylo-paml-perl-1.7.3/lib/Bio/Tools/Run/Phylo/PAML/Evolver.pm:                                Perl5 module source, ASCII text
data/libbio-tools-phylo-paml-perl-1.7.3/bin/bp_pairwise_kaks:                                                   Perl script text executable
data/libbio-tools-phylo-paml-perl-1.7.3/debian/changelog:                                                       ASCII text
data/libbio-tools-phylo-paml-perl-1.7.3/debian/control:                                                         ASCII text
data/libbio-tools-phylo-paml-perl-1.7.3/debian/copyright:                                                       ASCII text
data/libbio-tools-phylo-paml-perl-1.7.3/debian/libbio-tools-phylo-paml-perl.lintian-overrides:                  ASCII text
data/libbio-tools-phylo-paml-perl-1.7.3/debian/patches/evolver-program-name.patch:                              unified diff output, ASCII text
data/libbio-tools-phylo-paml-perl-1.7.3/debian/patches/series:                                                  ASCII text
data/libbio-tools-phylo-paml-perl-1.7.3/debian/rules:                                                           a /usr/bin/make -f script, ASCII text executable
data/libbio-tools-phylo-paml-perl-1.7.3/debian/salsa-ci.yml:                                                    ASCII text
data/libbio-tools-phylo-paml-perl-1.7.3/debian/source/format:                                                   ASCII text
data/libbio-tools-phylo-paml-perl-1.7.3/debian/upstream/metadata:                                               ASCII text
data/libbio-tools-phylo-paml-perl-1.7.3/debian/watch:                                                           ASCII text
data/libbio-tools-phylo-paml-perl-1.7.3/.pc/.version:                                                           ASCII text
data/libbio-tools-phylo-paml-perl-1.7.3/.pc/.quilt_patches:                                                     ASCII text
data/libbio-tools-phylo-paml-perl-1.7.3/.pc/.quilt_series:                                                      ASCII text
data/libbio-tools-phylo-paml-perl-1.7.3/.pc/applied-patches:                                                    ASCII text
data/libbio-tools-phylo-paml-perl-1.7.3/.pc/evolver-program-name.patch/Makefile.PL:                             ASCII text
data/libbio-tools-phylo-paml-perl-1.7.3/.pc/evolver-program-name.patch/lib/Bio/Tools/Run/Phylo/PAML/Evolver.pm: Perl5 module source, ASCII text
data/libbio-tools-phylo-paml-perl-1.7.3/Makefile.PL:                                                            ASCII text