data/mapdamage-2.2.1+dfsg/LICENSE.txt:                                                  ASCII text
data/mapdamage-2.2.1+dfsg/MANIFEST:                                                     ASCII text
data/mapdamage-2.2.1+dfsg/MANIFEST.in:                                                  ASCII text
data/mapdamage-2.2.1+dfsg/README.md:                                                    UTF-8 Unicode text, with very long lines
data/mapdamage-2.2.1+dfsg/bin/mapDamage:                                                Python script, UTF-8 Unicode text executable
data/mapdamage-2.2.1+dfsg/mapdamage/Rscripts/lengths.R:                                 ASCII text
data/mapdamage-2.2.1+dfsg/mapdamage/Rscripts/mapDamage.R:                               ASCII text
data/mapdamage-2.2.1+dfsg/mapdamage/Rscripts/stats/checkLibraries.R:                    a /usr/bin/Rscript script, ASCII text executable
data/mapdamage-2.2.1+dfsg/mapdamage/Rscripts/stats/data.R:                              ASCII text
data/mapdamage-2.2.1+dfsg/mapdamage/Rscripts/stats/function.R:                          ASCII text
data/mapdamage-2.2.1+dfsg/mapdamage/Rscripts/stats/main.R:                              ASCII text
data/mapdamage-2.2.1+dfsg/mapdamage/Rscripts/stats/postConditonal.R:                    ASCII text
data/mapdamage-2.2.1+dfsg/mapdamage/Rscripts/stats/priorPropose.R:                      ASCII text
data/mapdamage-2.2.1+dfsg/mapdamage/Rscripts/stats/runGeneral.R:                        a /usr/bin/Rscript script, ASCII text executable
data/mapdamage-2.2.1+dfsg/mapdamage/Rscripts/stats/start.R:                             ASCII text
data/mapdamage-2.2.1+dfsg/mapdamage/__init__.py:                                        Python script, ASCII text executable
data/mapdamage-2.2.1+dfsg/mapdamage/align.py:                                           Python script, ASCII text executable
data/mapdamage-2.2.1+dfsg/mapdamage/mp_test.py:                                         Python script, ASCII text executable
data/mapdamage-2.2.1+dfsg/mapdamage/parseoptions.py:                                    Python script, ASCII text executable
data/mapdamage-2.2.1+dfsg/mapdamage/rescale.py:                                         Python script, ASCII text executable
data/mapdamage-2.2.1+dfsg/mapdamage/rscript.py:                                         Python script, ASCII text executable
data/mapdamage-2.2.1+dfsg/mapdamage/seq.py:                                             Python script, ASCII text executable
data/mapdamage-2.2.1+dfsg/mapdamage/tables.py:                                          Python script, ASCII text executable
data/mapdamage-2.2.1+dfsg/mapdamage/tests/dnacomp.txt:                                  ASCII text
data/mapdamage-2.2.1+dfsg/mapdamage/tests/fake1.fasta:                                  ASCII text
data/mapdamage-2.2.1+dfsg/mapdamage/tests/probs/Stats_out_MCMC_correct_prob.csv:        CSV text
data/mapdamage-2.2.1+dfsg/mapdamage/tests/test.bam:                                     Blocked GNU Zip Format (BGZF; gzip compatible), block length 135
data/mapdamage-2.2.1+dfsg/mapdamage/tests/test.rescaled.correct.sam:                    Sequence Alignment/Map (SAM), ASCII text
data/mapdamage-2.2.1+dfsg/mapdamage/version.py:                                         Python script, ASCII text executable
data/mapdamage-2.2.1+dfsg/mapdamage/composition.py:                                     Python script, ASCII text executable
data/mapdamage-2.2.1+dfsg/debian/README.test:                                           UTF-8 Unicode text
data/mapdamage-2.2.1+dfsg/debian/changelog:                                             ASCII text
data/mapdamage-2.2.1+dfsg/debian/clean:                                                 ASCII text
data/mapdamage-2.2.1+dfsg/debian/control:                                               ASCII text
data/mapdamage-2.2.1+dfsg/debian/copyright:                                             UTF-8 Unicode text
data/mapdamage-2.2.1+dfsg/debian/docs:                                                  ASCII text
data/mapdamage-2.2.1+dfsg/debian/install:                                               ASCII text
data/mapdamage-2.2.1+dfsg/debian/manpages:                                              ASCII text
data/mapdamage-2.2.1+dfsg/debian/mapDamage.1:                                           troff or preprocessor input, ASCII text
data/mapdamage-2.2.1+dfsg/debian/patches/series:                                        ASCII text
data/mapdamage-2.2.1+dfsg/debian/patches/use_debian_packaged_seqtk.patch:               unified diff output, UTF-8 Unicode text
data/mapdamage-2.2.1+dfsg/debian/rules:                                                 a /usr/bin/make -f script, ASCII text executable, with very long lines
data/mapdamage-2.2.1+dfsg/debian/salsa-ci.yml:                                          ASCII text
data/mapdamage-2.2.1+dfsg/debian/source/format:                                         ASCII text
data/mapdamage-2.2.1+dfsg/debian/tests/control:                                         ASCII text
data/mapdamage-2.2.1+dfsg/debian/tests/ref_T.fa:                                        ASCII text
data/mapdamage-2.2.1+dfsg/debian/tests/run-r-packages-check:                            POSIX shell script, ASCII text executable
data/mapdamage-2.2.1+dfsg/debian/tests/run-unit-test:                                   POSIX shell script, ASCII text executable
data/mapdamage-2.2.1+dfsg/debian/upstream/metadata:                                     UTF-8 Unicode text
data/mapdamage-2.2.1+dfsg/debian/watch:                                                 ASCII text
data/mapdamage-2.2.1+dfsg/.pc/.version:                                                 ASCII text
data/mapdamage-2.2.1+dfsg/.pc/.quilt_patches:                                           ASCII text
data/mapdamage-2.2.1+dfsg/.pc/.quilt_series:                                            ASCII text
data/mapdamage-2.2.1+dfsg/.pc/applied-patches:                                          ASCII text
data/mapdamage-2.2.1+dfsg/.pc/use_debian_packaged_seqtk.patch/setup.py:                 Python script, UTF-8 Unicode text executable
data/mapdamage-2.2.1+dfsg/.pc/use_debian_packaged_seqtk.patch/bin/mapDamage:            Python script, UTF-8 Unicode text executable
data/mapdamage-2.2.1+dfsg/.pc/use_debian_packaged_seqtk.patch/mapdamage/composition.py: Python script, ASCII text executable
data/mapdamage-2.2.1+dfsg/setup.py:                                                     Python script, UTF-8 Unicode text executable