data/maq-0.7.1/AUTHORS: ASCII text data/maq-0.7.1/COPYING: ASCII text data/maq-0.7.1/ChangeLog: ASCII text data/maq-0.7.1/FUTURES: empty data/maq-0.7.1/INSTALL: ASCII text data/maq-0.7.1/Makefile.am: ASCII text data/maq-0.7.1/Makefile.generic: makefile script, ASCII text data/maq-0.7.1/Makefile.in: makefile script, ASCII text data/maq-0.7.1/NEWS: ASCII text data/maq-0.7.1/PROBLEMS: empty data/maq-0.7.1/README: ASCII text data/maq-0.7.1/aclocal.m4: M4 macro processor script, ASCII text data/maq-0.7.1/algo.hh: C++ source, ASCII text data/maq-0.7.1/altchr.cc: C source, ASCII text data/maq-0.7.1/assemble.cc: C source, ASCII text data/maq-0.7.1/assemble.h: C source, ASCII text data/maq-0.7.1/assopt.c: C source, ASCII text data/maq-0.7.1/autogen.sh: POSIX shell script, ASCII text executable data/maq-0.7.1/aux_utils.c: C source, ASCII text data/maq-0.7.1/bfa.c: C source, ASCII text data/maq-0.7.1/bfa.h: C source, ASCII text data/maq-0.7.1/break_pair.c: C source, ASCII text data/maq-0.7.1/cleanup.sh: ASCII text data/maq-0.7.1/config.guess: POSIX shell script, ASCII text executable data/maq-0.7.1/config.h.in: ASCII text data/maq-0.7.1/config.sub: POSIX shell script, ASCII text executable data/maq-0.7.1/configure: POSIX shell script, ASCII text executable, with CR, LF line terminators data/maq-0.7.1/const.c: C source, ASCII text data/maq-0.7.1/const.h: C source, ASCII text data/maq-0.7.1/csmap2ntmap.cc: C source, ASCII text data/maq-0.7.1/dword.hh: C++ source, ASCII text data/maq-0.7.1/eland2maq.cc: C source, ASCII text data/maq-0.7.1/fasta2bfa.c: C source, ASCII text data/maq-0.7.1/fastq2bfq.c: C source, ASCII text data/maq-0.7.1/genran.c: C source, ASCII text data/maq-0.7.1/genran.h: C source, ASCII text data/maq-0.7.1/get_pos.c: C source, ASCII text data/maq-0.7.1/glf.h: C source, ASCII text data/maq-0.7.1/glfgen.cc: C source, ASCII text data/maq-0.7.1/indel_call.cc: C source, ASCII text data/maq-0.7.1/indel_pe.cc: C source, ASCII text data/maq-0.7.1/indel_soa.cc: C source, ASCII text data/maq-0.7.1/install-sh: POSIX shell script, ASCII text executable data/maq-0.7.1/main.c: C source, ASCII text data/maq-0.7.1/main.h: C source, ASCII text data/maq-0.7.1/mapcheck.cc: C source, ASCII text data/maq-0.7.1/maq.1: troff or preprocessor input, ASCII text data/maq-0.7.1/maq.pdf: PDF document, version 1.3 data/maq-0.7.1/maq.pod: Perl POD document, ASCII text data/maq-0.7.1/maqmap.h: C source, ASCII text data/maq-0.7.1/maqmap_conv.c: C source, ASCII text data/maq-0.7.1/match.cc: C++ source, ASCII text data/maq-0.7.1/match.hh: C source, ASCII text data/maq-0.7.1/match_aux.cc: C source, ASCII text data/maq-0.7.1/merge.cc: C source, ASCII text data/maq-0.7.1/missing: POSIX shell script, ASCII text executable data/maq-0.7.1/pair_stat.cc: C++ source, ASCII text data/maq-0.7.1/pileup.cc: C source, ASCII text data/maq-0.7.1/rbcc.cc: C source, ASCII text data/maq-0.7.1/read.cc: C source, ASCII text data/maq-0.7.1/read.h: C source, ASCII text data/maq-0.7.1/rmdup.cc: C source, ASCII text data/maq-0.7.1/scripts/asub: Perl script text executable data/maq-0.7.1/scripts/farm-run.pl: Perl script text executable data/maq-0.7.1/scripts/fq_all2std.pl: Perl script text executable data/maq-0.7.1/scripts/maq.pl: Perl script text executable data/maq-0.7.1/scripts/maq_eval.pl: Perl script text executable data/maq-0.7.1/scripts/maq_plot.pl: Perl script text executable data/maq-0.7.1/scripts/maq_post.pl: Perl script text executable data/maq-0.7.1/scripts/maq_sanger.pl: Perl script text executable data/maq-0.7.1/scripts/paf_utils.pl: Perl script text executable data/maq-0.7.1/scripts/solid2fastq.pl: Perl script text executable data/maq-0.7.1/seq.c: C source, ASCII text data/maq-0.7.1/seq.h: C source, ASCII text data/maq-0.7.1/simulate.c: C source, ASCII text data/maq-0.7.1/sort_mapping.cc: C++ source, ASCII text data/maq-0.7.1/stdaln.c: C source, ASCII text data/maq-0.7.1/stdaln.h: C source, ASCII text data/maq-0.7.1/submap.c: C source, ASCII text data/maq-0.7.1/subsnp.cc: C source, ASCII text data/maq-0.7.1/debian/README.source: UTF-8 Unicode text data/maq-0.7.1/debian/changelog: UTF-8 Unicode text data/maq-0.7.1/debian/control: ASCII text data/maq-0.7.1/debian/copyright: UTF-8 Unicode text data/maq-0.7.1/debian/docs: ASCII text data/maq-0.7.1/debian/install: ASCII text data/maq-0.7.1/debian/manpages: ASCII text data/maq-0.7.1/debian/mans/farm-run.pl.1: troff or preprocessor input, ASCII text data/maq-0.7.1/debian/mans/maq.pl.1: troff or preprocessor input, ASCII text data/maq-0.7.1/debian/mans/maq_eval.pl.1: troff or preprocessor input, ASCII text data/maq-0.7.1/debian/mans/maq_plot.pl.1: troff or preprocessor input, ASCII text data/maq-0.7.1/debian/maq.doc-base: UTF-8 Unicode text data/maq-0.7.1/debian/maq.examples: ASCII text data/maq-0.7.1/debian/maq.lintian-overrides: ASCII text data/maq-0.7.1/debian/maq.tests/test.fa: ASCII text data/maq-0.7.1/debian/maq.tests/test.fastq: ASCII text 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