data/proalign-0.603/AlignmentLoop.java:         Perl5 module source, ASCII text
data/proalign-0.603/AlignmentNode.java:         Perl5 module source, ASCII text
data/proalign-0.603/CheckSequence.java:         Perl5 module source, ASCII text
data/proalign-0.603/CheckTrailing.java:         Perl5 module source, ASCII text
data/proalign-0.603/CheckTreeAndData.java:      Perl5 module source, ASCII text
data/proalign-0.603/EstimateFrequencies.java:   Perl5 module source, ASCII text
data/proalign-0.603/InFile.java:                Perl5 module source, ASCII text
data/proalign-0.603/MinimumProbWindow.java:     Perl5 module source, ASCII text
data/proalign-0.603/NeighborJoining.java:       Perl5 module source, ASCII text
data/proalign-0.603/NicePrint.java:             Perl5 module source, ASCII text
data/proalign-0.603/OpenDialog.java:            Perl5 module source, ASCII text
data/proalign-0.603/OpenFileChooser.java:       Perl5 module source, ASCII text
data/proalign-0.603/OpenFolderChooser.java:     Perl5 module source, ASCII text
data/proalign-0.603/OutFile.java:               Perl5 module source, ASCII text
data/proalign-0.603/OutOfMemoryException.java:  Perl5 module source, ASCII text
data/proalign-0.603/PAFileFilter.java:          Perl5 module source, ASCII text
data/proalign-0.603/ParameterEstimates.java:    Perl5 module source, ASCII text
data/proalign-0.603/PixelRule.java:             Perl5 module source, ASCII text
data/proalign-0.603/PrintCurve.java:            Perl5 module source, ASCII text
data/proalign-0.603/PrintData.java:             Perl5 module source, ASCII text
data/proalign-0.603/PrintMinimumCurve.java:     Perl5 module source, ASCII text
data/proalign-0.603/PrintNames.java:            Perl5 module source, ASCII text
data/proalign-0.603/PrintTree.java:             Perl5 module source, ASCII text
data/proalign-0.603/ProAlign.java:              Perl5 module source, ASCII text
data/proalign-0.603/PwAlignment.java:           Perl5 module source, ASCII text
data/proalign-0.603/PwAlignmentLoop.java:       Perl5 module source, ASCII text
data/proalign-0.603/PwSubstitutionMatrix.java:  Perl5 module source, ASCII text
data/proalign-0.603/QualityWindow.java:         Perl5 module source, ASCII text
data/proalign-0.603/ReadArguments.java:         Perl5 module source, ASCII text
data/proalign-0.603/ResultWindow.java:          Perl5 module source, ASCII text
data/proalign-0.603/Rule.java:                  Perl5 module source, ASCII text
data/proalign-0.603/RunClustalw.java:           Perl5 module source, ASCII text
data/proalign-0.603/RunCommandLine.java:        Perl5 module source, ASCII text
data/proalign-0.603/RunMultiple.java:           Perl5 module source, ASCII text
data/proalign-0.603/SampleAlignments.java:      Perl5 module source, ASCII text
data/proalign-0.603/SampleLoop.java:            Perl5 module source, ASCII text
data/proalign-0.603/SaveData.java:              Perl5 module source, ASCII text
data/proalign-0.603/SequenceReader.java:        Perl5 module source, ASCII text
data/proalign-0.603/SetParameters.java:         Perl5 module source, ASCII text
data/proalign-0.603/SubstitutionModel.java:     Perl5 module source, ASCII text
data/proalign-0.603/TraceBackPath.java:         Perl5 module source, ASCII text
data/proalign-0.603/TransformLog.java:          Perl5 module source, ASCII text
data/proalign-0.603/TreeNode.java:              Perl5 module source, ASCII text
data/proalign-0.603/TreeReader.java:            Perl5 module source, ASCII text
data/proalign-0.603/UserSettings.java:          Perl5 module source, ASCII text
data/proalign-0.603/Viterbi.java:               Perl5 module source, ASCII text
data/proalign-0.603/WinClustalw.java:           Perl5 module source, ASCII text
data/proalign-0.603/debian/README.Debian:       news or mail, UTF-8 Unicode text
data/proalign-0.603/debian/changelog:           ASCII text
data/proalign-0.603/debian/control:             ASCII text
data/proalign-0.603/debian/copyright:           UTF-8 Unicode text
data/proalign-0.603/debian/proalign.1:          troff or preprocessor input, ASCII text
data/proalign-0.603/debian/proalign.install:    ASCII text
data/proalign-0.603/debian/proalign.manpages:   ASCII text
data/proalign-0.603/debian/rules:               a /usr/bin/make -f script, ASCII text executable
data/proalign-0.603/debian/salsa-ci.yml:        ASCII text
data/proalign-0.603/debian/scripts/proalign:    POSIX shell script, ASCII text executable
data/proalign-0.603/debian/source/format:       ASCII text
data/proalign-0.603/debian/tests/control_:      ASCII text
data/proalign-0.603/debian/tests/run-unit-test: Bourne-Again shell script, ASCII text executable
data/proalign-0.603/debian/upstream/metadata:   UTF-8 Unicode text
data/proalign-0.603/debian/watch:               ASCII text
data/proalign-0.603/.pc/.version:               ASCII text
data/proalign-0.603/.pc/.quilt_patches:         ASCII text
data/proalign-0.603/.pc/.quilt_series:          ASCII text
data/proalign-0.603/.pc/applied-patches:        empty