data/r-cran-adegenet-2.1.3/NAMESPACE: ASCII text data/r-cran-adegenet-2.1.3/ChangeLog: ASCII text data/r-cran-adegenet-2.1.3/README.md: ASCII text data/r-cran-adegenet-2.1.3/data/datalist: ASCII text data/r-cran-adegenet-2.1.3/data/microbov.rda: bzip2 compressed data, block size = 900k data/r-cran-adegenet-2.1.3/data/H3N2.rda: XZ compressed data data/r-cran-adegenet-2.1.3/data/eHGDP.rda: bzip2 compressed data, block size = 900k data/r-cran-adegenet-2.1.3/data/rupica.RData: XZ compressed data data/r-cran-adegenet-2.1.3/data/spcaIllus.rda: bzip2 compressed data, block size = 900k data/r-cran-adegenet-2.1.3/data/nancycats.rda: bzip2 compressed data, block size = 900k data/r-cran-adegenet-2.1.3/data/dapcIllus.rda: bzip2 compressed data, block size = 900k data/r-cran-adegenet-2.1.3/data/hybridtoy.RData: bzip2 compressed data, block size = 900k data/r-cran-adegenet-2.1.3/data/swallowtails.rda: bzip2 compressed data, block size = 900k data/r-cran-adegenet-2.1.3/data/sim2pop.rda: bzip2 compressed data, block size = 900k data/r-cran-adegenet-2.1.3/man/glPca.Rd: ASCII text data/r-cran-adegenet-2.1.3/man/propShared.Rd: ASCII text data/r-cran-adegenet-2.1.3/man/read.structure.Rd: ASCII text data/r-cran-adegenet-2.1.3/man/hierarchy-methods.Rd: ASCII text data/r-cran-adegenet-2.1.3/man/scaleGen.Rd: ASCII text data/r-cran-adegenet-2.1.3/man/genind.Rd: LaTeX document, ASCII text data/r-cran-adegenet-2.1.3/man/haploGen.Rd: ASCII text data/r-cran-adegenet-2.1.3/man/AIC.snapclust.Rd: ASCII text data/r-cran-adegenet-2.1.3/man/export_to_mvmapper.Rd: ASCII text data/r-cran-adegenet-2.1.3/man/swallowtails.Rd: ASCII text data/r-cran-adegenet-2.1.3/man/as.genlight.Rd: ASCII text data/r-cran-adegenet-2.1.3/man/ascore.Rd: ASCII text data/r-cran-adegenet-2.1.3/man/doc_C_routines.Rd: ASCII text data/r-cran-adegenet-2.1.3/man/population-methods.Rd: ASCII text data/r-cran-adegenet-2.1.3/man/dapcGraphics.Rd: ASCII text data/r-cran-adegenet-2.1.3/man/read.genetix.Rd: ASCII text data/r-cran-adegenet-2.1.3/man/read.genepop.Rd: ASCII text data/r-cran-adegenet-2.1.3/man/snapclust.Rd: ASCII text data/r-cran-adegenet-2.1.3/man/fasta2genlight.Rd: ASCII text data/r-cran-adegenet-2.1.3/man/glSim.Rd: ASCII text data/r-cran-adegenet-2.1.3/man/H3N2.Rd: ASCII text data/r-cran-adegenet-2.1.3/man/auxil.Rd: ASCII text data/r-cran-adegenet-2.1.3/man/genind2df.Rd: ASCII text data/r-cran-adegenet-2.1.3/man/mutations.Rd: ASCII text data/r-cran-adegenet-2.1.3/man/servers.Rd: ASCII text data/r-cran-adegenet-2.1.3/man/glAux.Rd: ASCII text data/r-cran-adegenet-2.1.3/man/strata-methods.Rd: ASCII text data/r-cran-adegenet-2.1.3/man/fasta2DNAbin.Rd: ASCII text data/r-cran-adegenet-2.1.3/man/spca_randtest.Rd: ASCII text data/r-cran-adegenet-2.1.3/man/seqTrack.Rd: ASCII text data/r-cran-adegenet-2.1.3/man/tab.Rd: ASCII text data/r-cran-adegenet-2.1.3/man/spcaIllus.Rd: ASCII text data/r-cran-adegenet-2.1.3/man/inbreeding.Rd: ASCII text data/r-cran-adegenet-2.1.3/man/repool.Rd: ASCII text data/r-cran-adegenet-2.1.3/man/accessors.Rd: LaTeX document, ASCII text data/r-cran-adegenet-2.1.3/man/genpop.Rd: LaTeX document, ASCII text data/r-cran-adegenet-2.1.3/man/isPoly.Rd: ASCII text data/r-cran-adegenet-2.1.3/man/BIC.snapclust.Rd: ASCII text data/r-cran-adegenet-2.1.3/man/microbov.Rd: ASCII text data/r-cran-adegenet-2.1.3/man/old2new.Rd: ASCII text data/r-cran-adegenet-2.1.3/man/KIC.Rd: ASCII text data/r-cran-adegenet-2.1.3/man/hybridize.Rd: ASCII text data/r-cran-adegenet-2.1.3/man/new.genind.Rd: ASCII text data/r-cran-adegenet-2.1.3/man/SNPbin.Rd: LaTeX document, ASCII text data/r-cran-adegenet-2.1.3/man/web.Rd: ASCII text data/r-cran-adegenet-2.1.3/man/snapclust.choose.k.Rd: ASCII text data/r-cran-adegenet-2.1.3/man/dapc.Rd: ASCII text data/r-cran-adegenet-2.1.3/man/spca.rtests.Rd: ASCII text data/r-cran-adegenet-2.1.3/man/pairDist.Rd: ASCII text data/r-cran-adegenet-2.1.3/man/eHGDP.Rd: ASCII text data/r-cran-adegenet-2.1.3/man/genlight.Rd: LaTeX document, ASCII text data/r-cran-adegenet-2.1.3/man/compoplot.Rd: ASCII text data/r-cran-adegenet-2.1.3/man/spca.Rd: ASCII text data/r-cran-adegenet-2.1.3/man/colorplot.Rd: ASCII text data/r-cran-adegenet-2.1.3/man/chooseCN.Rd: ASCII text data/r-cran-adegenet-2.1.3/man/snpposi.Rd: ASCII text data/r-cran-adegenet-2.1.3/man/minorAllele.Rd: ASCII text data/r-cran-adegenet-2.1.3/man/hybridtoy.Rd: ASCII text data/r-cran-adegenet-2.1.3/man/HWE.Rd: ASCII text data/r-cran-adegenet-2.1.3/man/read.fstat.Rd: ASCII text data/r-cran-adegenet-2.1.3/man/find.clusters.Rd: ASCII text data/r-cran-adegenet-2.1.3/man/sequences.Rd: ASCII text data/r-cran-adegenet-2.1.3/man/makefreq.Rd: ASCII text data/r-cran-adegenet-2.1.3/man/glPlot.Rd: ASCII text data/r-cran-adegenet-2.1.3/man/df2genind.Rd: ASCII text data/r-cran-adegenet-2.1.3/man/gengraph.Rd: ASCII text data/r-cran-adegenet-2.1.3/man/read.snp.Rd: ASCII text data/r-cran-adegenet-2.1.3/man/coords.monmonier.Rd: ASCII text, with CRLF line terminators data/r-cran-adegenet-2.1.3/man/nancycats.Rd: ASCII text data/r-cran-adegenet-2.1.3/man/loadingplot.Rd: ASCII text data/r-cran-adegenet-2.1.3/man/monmonier.Rd: ASCII text data/r-cran-adegenet-2.1.3/man/truenames.Rd: ASCII text data/r-cran-adegenet-2.1.3/man/genind2genpop.Rd: ASCII text data/r-cran-adegenet-2.1.3/man/read.PLINK.Rd: ASCII text data/r-cran-adegenet-2.1.3/man/snpzip.rd: ASCII text data/r-cran-adegenet-2.1.3/man/seppop.Rd: ASCII text data/r-cran-adegenet-2.1.3/man/virClasses.Rd: LaTeX document, ASCII text data/r-cran-adegenet-2.1.3/man/propTyped.Rd: ASCII text data/r-cran-adegenet-2.1.3/man/as.SNPbin.Rd: ASCII text data/r-cran-adegenet-2.1.3/man/showmekittens.Rd: ASCII text data/r-cran-adegenet-2.1.3/man/dapcIllus.Rd: ASCII text data/r-cran-adegenet-2.1.3/man/adegenet.package.Rd: UTF-8 Unicode text data/r-cran-adegenet-2.1.3/man/sim2pop.Rd: ASCII text data/r-cran-adegenet-2.1.3/man/rupica.Rd: UTF-8 Unicode text data/r-cran-adegenet-2.1.3/man/Hs.Rd: ASCII text data/r-cran-adegenet-2.1.3/man/import2genind.Rd: ASCII text data/r-cran-adegenet-2.1.3/man/new.genpop.Rd: ASCII text data/r-cran-adegenet-2.1.3/man/xvalDapc.Rd: ASCII text data/r-cran-adegenet-2.1.3/man/AICc.Rd: ASCII text data/r-cran-adegenet-2.1.3/man/dist.genpop.Rd: ASCII text data/r-cran-adegenet-2.1.3/man/seploc.Rd: ASCII text data/r-cran-adegenet-2.1.3/man/as-methods.Rd: LaTeX document, ASCII text data/r-cran-adegenet-2.1.3/man/selpopsize.Rd: ASCII text data/r-cran-adegenet-2.1.3/man/Hs.test.Rd: ASCII text data/r-cran-adegenet-2.1.3/DESCRIPTION: UTF-8 Unicode text data/r-cran-adegenet-2.1.3/tests/testthat/test-seppop.R: ASCII text data/r-cran-adegenet-2.1.3/tests/testthat/test_genlight.R: ASCII text data/r-cran-adegenet-2.1.3/tests/testthat/test_xval.R: ASCII text data/r-cran-adegenet-2.1.3/tests/testthat/test_accessors.R: ASCII text data/r-cran-adegenet-2.1.3/tests/testthat/test-prop.R: ASCII text data/r-cran-adegenet-2.1.3/tests/testthat/test_constructors.R: ASCII text data/r-cran-adegenet-2.1.3/tests/testthat/test_repool.R: ASCII text data/r-cran-adegenet-2.1.3/tests/testthat/test_import.R: ASCII text data/r-cran-adegenet-2.1.3/tests/testthat/test_hierarchy.R: ASCII text data/r-cran-adegenet-2.1.3/tests/testthat/test_summary.R: ASCII text data/r-cran-adegenet-2.1.3/tests/testthat/Rplots.pdf: PDF document, version 1.4 data/r-cran-adegenet-2.1.3/tests/testthat/test_conversion.R: ASCII text data/r-cran-adegenet-2.1.3/tests/testthat/test_snapclust.R: ASCII text data/r-cran-adegenet-2.1.3/tests/testthat/test_compoplot.R: ASCII text data/r-cran-adegenet-2.1.3/tests/testthat/test-findclust.R: ASCII text data/r-cran-adegenet-2.1.3/tests/testthat/test_haploGen.R: ASCII text data/r-cran-adegenet-2.1.3/tests/testthat/test_subset.R: ASCII text data/r-cran-adegenet-2.1.3/tests/testthat.R: ASCII text data/r-cran-adegenet-2.1.3/src/init.c: C source, ASCII text data/r-cran-adegenet-2.1.3/src/sharedAll.c: C source, ASCII text data/r-cran-adegenet-2.1.3/src/snpbin.c: C source, ASCII text data/r-cran-adegenet-2.1.3/src/adesub.c: C source, Non-ISO extended-ASCII text data/r-cran-adegenet-2.1.3/src/adesub.h: C source, ASCII text data/r-cran-adegenet-2.1.3/src/monmonier-utils.c: C source, ASCII text data/r-cran-adegenet-2.1.3/src/GLfunctions.c: C source, ASCII text data/r-cran-adegenet-2.1.3/src/GLfunctions.h: C source, ASCII text data/r-cran-adegenet-2.1.3/src/snpbin.h: C source, ASCII text data/r-cran-adegenet-2.1.3/R/classes.R: ASCII text data/r-cran-adegenet-2.1.3/R/old2new.R: ASCII text data/r-cran-adegenet-2.1.3/R/pairDist.R: UTF-8 Unicode text data/r-cran-adegenet-2.1.3/R/haploGen.R: ASCII text data/r-cran-adegenet-2.1.3/R/scale.R: ASCII text data/r-cran-adegenet-2.1.3/R/doc_C_routines.R: ASCII text data/r-cran-adegenet-2.1.3/R/xvalDapc.R: ASCII text data/r-cran-adegenet-2.1.3/R/monmonier.R: ASCII text data/r-cran-adegenet-2.1.3/R/strataMethods.R: ASCII text data/r-cran-adegenet-2.1.3/R/makefreq.R: ASCII text data/r-cran-adegenet-2.1.3/R/spca_randtest.R: ASCII text data/r-cran-adegenet-2.1.3/R/AIC.snapclust.R: ASCII text data/r-cran-adegenet-2.1.3/R/zzz.R: ASCII text data/r-cran-adegenet-2.1.3/R/handling.R: ASCII text data/r-cran-adegenet-2.1.3/R/glPlot.R: UTF-8 Unicode text data/r-cran-adegenet-2.1.3/R/glSim.R: ASCII text data/r-cran-adegenet-2.1.3/R/mutations.R: ASCII text data/r-cran-adegenet-2.1.3/R/export.R: ASCII text data/r-cran-adegenet-2.1.3/R/chooseCN.R: ASCII text data/r-cran-adegenet-2.1.3/R/glHandle.R: ASCII text data/r-cran-adegenet-2.1.3/R/loadingplot.R: ASCII text data/r-cran-adegenet-2.1.3/R/Hs.R: ASCII text data/r-cran-adegenet-2.1.3/R/accessors.R: ASCII text data/r-cran-adegenet-2.1.3/R/constructors.R: ASCII text data/r-cran-adegenet-2.1.3/R/export_to_mvmapper.R: ASCII text data/r-cran-adegenet-2.1.3/R/servers.R: ASCII text data/r-cran-adegenet-2.1.3/R/gengraph.R: ASCII text data/r-cran-adegenet-2.1.3/R/gstat.randtest.R: ASCII text data/r-cran-adegenet-2.1.3/R/glFunctions.R: ASCII text data/r-cran-adegenet-2.1.3/R/AICc.snapclust.R: ASCII text data/r-cran-adegenet-2.1.3/R/dist.genpop.R: ASCII text data/r-cran-adegenet-2.1.3/R/showmekittens.R: ASCII text data/r-cran-adegenet-2.1.3/R/SNPbin.R: ASCII text data/r-cran-adegenet-2.1.3/R/seqTrack.R: ASCII text data/r-cran-adegenet-2.1.3/R/orthobasis.R: ASCII text data/r-cran-adegenet-2.1.3/R/haploPop.R: ASCII text data/r-cran-adegenet-2.1.3/R/PCtest.R: ASCII text data/r-cran-adegenet-2.1.3/R/hierarchyMethods.R: ASCII text data/r-cran-adegenet-2.1.3/R/inbreeding.R: ASCII text data/r-cran-adegenet-2.1.3/R/propShared.R: ASCII text, with CRLF line terminators data/r-cran-adegenet-2.1.3/R/adegenet.package.R: UTF-8 Unicode text data/r-cran-adegenet-2.1.3/R/HWE.R: ASCII text data/r-cran-adegenet-2.1.3/R/genind2genpop.R: ASCII text data/r-cran-adegenet-2.1.3/R/coords.monmonier.R: ASCII text data/r-cran-adegenet-2.1.3/R/dapc.R: UTF-8 Unicode text data/r-cran-adegenet-2.1.3/R/colorplot.R: ASCII text data/r-cran-adegenet-2.1.3/R/dist.genlight.R: ASCII text data/r-cran-adegenet-2.1.3/R/snapclust.R: ASCII text data/r-cran-adegenet-2.1.3/R/find.clust.R: ASCII text data/r-cran-adegenet-2.1.3/R/compoplot.R: ASCII text data/r-cran-adegenet-2.1.3/R/fstat.R: ASCII text data/r-cran-adegenet-2.1.3/R/global_local_tests.R: ASCII text data/r-cran-adegenet-2.1.3/R/KIC.snapclust.R: ASCII text data/r-cran-adegenet-2.1.3/R/import.R: ASCII text data/r-cran-adegenet-2.1.3/R/basicMethods.R: ASCII text data/r-cran-adegenet-2.1.3/R/hybridize.R: ASCII text data/r-cran-adegenet-2.1.3/R/snpzip.R: ASCII text data/r-cran-adegenet-2.1.3/R/auxil.R: ASCII text data/r-cran-adegenet-2.1.3/R/minorAllele.R: ASCII text data/r-cran-adegenet-2.1.3/R/spca.R: ASCII text data/r-cran-adegenet-2.1.3/R/propTyped.R: ASCII text data/r-cran-adegenet-2.1.3/R/snapclust.choose.k.R: ASCII text data/r-cran-adegenet-2.1.3/R/snpposi.R: ASCII text data/r-cran-adegenet-2.1.3/R/simOutbreak.R: ASCII text data/r-cran-adegenet-2.1.3/R/sequences.R: ASCII text data/r-cran-adegenet-2.1.3/R/BIC.snapclust.R: ASCII text data/r-cran-adegenet-2.1.3/R/setAs.R: ASCII text data/r-cran-adegenet-2.1.3/R/datasets.R: UTF-8 Unicode text data/r-cran-adegenet-2.1.3/MD5: ASCII text data/r-cran-adegenet-2.1.3/inst/dapcServer/server.R: Pascal source, ASCII text data/r-cran-adegenet-2.1.3/inst/dapcServer/ui.R: ASCII text, with very long lines data/r-cran-adegenet-2.1.3/inst/files/swallowtails_loc.csv: CSV text data/r-cran-adegenet-2.1.3/inst/files/nancycats.str: ASCII text data/r-cran-adegenet-2.1.3/inst/files/nancycats.gtx: ASCII text, with CRLF line terminators data/r-cran-adegenet-2.1.3/inst/files/usflu.fasta: ASCII text data/r-cran-adegenet-2.1.3/inst/files/nancycats.gen: ASCII text, with CRLF line terminators data/r-cran-adegenet-2.1.3/inst/files/mondata2.rda: gzip compressed data, from Unix, original size modulo 2^32 1843 data/r-cran-adegenet-2.1.3/inst/files/pdH1N1-NA.fasta: ASCII text data/r-cran-adegenet-2.1.3/inst/files/nancycats.dat: ASCII text, with CRLF line terminators data/r-cran-adegenet-2.1.3/inst/files/mondata1.rda: gzip compressed data, from Unix, original size modulo 2^32 1843 data/r-cran-adegenet-2.1.3/inst/files/pdH1N1-HA.fasta: ASCII text data/r-cran-adegenet-2.1.3/inst/files/AFLP.txt: ASCII text data/r-cran-adegenet-2.1.3/inst/files/pdH1N1-data.csv: CSV text data/r-cran-adegenet-2.1.3/inst/files/exampleSnpDat.snp: ASCII text data/r-cran-adegenet-2.1.3/inst/CITATION: ASCII text data/r-cran-adegenet-2.1.3/debian/README.source: UTF-8 Unicode text data/r-cran-adegenet-2.1.3/debian/README.test: UTF-8 Unicode text data/r-cran-adegenet-2.1.3/debian/changelog: UTF-8 Unicode text data/r-cran-adegenet-2.1.3/debian/control: ASCII text data/r-cran-adegenet-2.1.3/debian/copyright: ASCII text data/r-cran-adegenet-2.1.3/debian/docs: ASCII text data/r-cran-adegenet-2.1.3/debian/rules: a /usr/bin/make -f script, ASCII text executable data/r-cran-adegenet-2.1.3/debian/salsa-ci.yml: ASCII text data/r-cran-adegenet-2.1.3/debian/source/format: ASCII text data/r-cran-adegenet-2.1.3/debian/tests/control: ASCII text data/r-cran-adegenet-2.1.3/debian/tests/run-unit-test: POSIX shell script, ASCII text executable data/r-cran-adegenet-2.1.3/debian/upstream/metadata: ASCII text data/r-cran-adegenet-2.1.3/debian/watch: ASCII text data/r-cran-adegenet-2.1.3/.pc/.version: ASCII text data/r-cran-adegenet-2.1.3/.pc/.quilt_patches: ASCII text data/r-cran-adegenet-2.1.3/.pc/.quilt_series: ASCII text data/r-cran-adegenet-2.1.3/.pc/applied-patches: empty