Flawfinder version 2.0.10, (C) 2001-2019 David A. Wheeler.
Number of rules (primarily dangerous function names) in C/C++ ruleset: 223
Examining data/kmc-2.3+dfsg/kmc_api/kmc_file.cpp
Examining data/kmc-2.3+dfsg/kmc_api/kmc_file.h
Examining data/kmc-2.3+dfsg/kmc_api/kmer_api.cpp
Examining data/kmc-2.3+dfsg/kmc_api/kmer_api.h
Examining data/kmc-2.3+dfsg/kmc_api/kmer_defs.h
Examining data/kmc-2.3+dfsg/kmc_api/mmer.cpp
Examining data/kmc-2.3+dfsg/kmc_api/mmer.h
Examining data/kmc-2.3+dfsg/kmc_api/stdafx.h
Examining data/kmc-2.3+dfsg/kmc_dump/kmc_dump.cpp
Examining data/kmc-2.3+dfsg/kmc_dump/nc_utils.cpp
Examining data/kmc-2.3+dfsg/kmc_dump/stdafx.cpp
Examining data/kmc-2.3+dfsg/kmc_dump/stdafx.h
Examining data/kmc-2.3+dfsg/kmc_dump/targetver.h
Examining data/kmc-2.3+dfsg/kmc_dump/nc_utils.h
Examining data/kmc-2.3+dfsg/kmc_dump_sample/kmc_dump_sample.cpp
Examining data/kmc-2.3+dfsg/kmc_dump_sample/stdafx.cpp
Examining data/kmc-2.3+dfsg/kmc_dump_sample/stdafx.h
Examining data/kmc-2.3+dfsg/kmc_dump_sample/targetver.h
Examining data/kmc-2.3+dfsg/kmc_tools/asmlib_wrapper.h
Examining data/kmc-2.3+dfsg/kmc_tools/bundle.h
Examining data/kmc-2.3+dfsg/kmc_tools/defs.h
Examining data/kmc-2.3+dfsg/kmc_tools/dump_writer.h
Examining data/kmc-2.3+dfsg/kmc_tools/expression_node.h
Examining data/kmc-2.3+dfsg/kmc_tools/fastq_filter.cpp
Examining data/kmc-2.3+dfsg/kmc_tools/fastq_filter.h
Examining data/kmc-2.3+dfsg/kmc_tools/fastq_reader.cpp
Examining data/kmc-2.3+dfsg/kmc_tools/fastq_writer.cpp
Examining data/kmc-2.3+dfsg/kmc_tools/fastq_writer.h
Examining data/kmc-2.3+dfsg/kmc_tools/histogram_writer.h
Examining data/kmc-2.3+dfsg/kmc_tools/kmc1_db_reader.h
Examining data/kmc-2.3+dfsg/kmc_tools/kmc_header.cpp
Examining data/kmc-2.3+dfsg/kmc_tools/kmc_header.h
Examining data/kmc-2.3+dfsg/kmc_tools/kmc_tools.cpp
Examining data/kmc-2.3+dfsg/kmc_tools/kmer.h
Examining data/kmc-2.3+dfsg/kmc_tools/meta_oper.h
Examining data/kmc-2.3+dfsg/kmc_tools/nc_utils.cpp
Examining data/kmc-2.3+dfsg/kmc_tools/nc_utils.h
Examining data/kmc-2.3+dfsg/kmc_tools/operations.h
Examining data/kmc-2.3+dfsg/kmc_tools/output_parser.h
Examining data/kmc-2.3+dfsg/kmc_tools/parser.h
Examining data/kmc-2.3+dfsg/kmc_tools/percent_progress.cpp
Examining data/kmc-2.3+dfsg/kmc_tools/percent_progress.h
Examining data/kmc-2.3+dfsg/kmc_tools/queues.h
Examining data/kmc-2.3+dfsg/kmc_tools/stdafx.cpp
Examining data/kmc-2.3+dfsg/kmc_tools/stdafx.h
Examining data/kmc-2.3+dfsg/kmc_tools/targetver.h
Examining data/kmc-2.3+dfsg/kmc_tools/timer.h
Examining data/kmc-2.3+dfsg/kmc_tools/tokenizer.cpp
Examining data/kmc-2.3+dfsg/kmc_tools/tokenizer.h
Examining data/kmc-2.3+dfsg/kmc_tools/fastq_reader.h
Examining data/kmc-2.3+dfsg/kmc_tools/config.h
Examining data/kmc-2.3+dfsg/kmc_tools/kmc1_db_writer.h
Examining data/kmc-2.3+dfsg/kmc_tools/kmc2_db_reader.h
Examining data/kmc-2.3+dfsg/kmc_tools/parameters_parser.cpp
Examining data/kmc-2.3+dfsg/kmc_tools/parameters_parser.h
Examining data/kmc-2.3+dfsg/kmc_tools/parser.cpp
Examining data/kmc-2.3+dfsg/kmer_counter/asmlib_wrapper.h
Examining data/kmc-2.3+dfsg/kmer_counter/bkb_merger.h
Examining data/kmc-2.3+dfsg/kmer_counter/bkb_reader.cpp
Examining data/kmc-2.3+dfsg/kmer_counter/bkb_reader.h
Examining data/kmc-2.3+dfsg/kmer_counter/bkb_subbin.h
Examining data/kmc-2.3+dfsg/kmer_counter/bkb_uncompactor.h
Examining data/kmc-2.3+dfsg/kmer_counter/bkb_writer.cpp
Examining data/kmc-2.3+dfsg/kmer_counter/bkb_writer.h
Examining data/kmc-2.3+dfsg/kmer_counter/defs.h
Examining data/kmc-2.3+dfsg/kmer_counter/develop.cpp
Examining data/kmc-2.3+dfsg/kmer_counter/develop.h
Examining data/kmc-2.3+dfsg/kmer_counter/fastq_reader.cpp
Examining data/kmc-2.3+dfsg/kmer_counter/kb_collector.h
Examining data/kmc-2.3+dfsg/kmer_counter/kb_completer.cpp
Examining data/kmc-2.3+dfsg/kmer_counter/kb_completer.h
Examining data/kmc-2.3+dfsg/kmer_counter/kb_reader.h
Examining data/kmc-2.3+dfsg/kmer_counter/kb_storer.cpp
Examining data/kmc-2.3+dfsg/kmer_counter/kb_storer.h
Examining data/kmc-2.3+dfsg/kmer_counter/kmc.h
Examining data/kmc-2.3+dfsg/kmer_counter/kmer.cpp
Examining data/kmc-2.3+dfsg/kmer_counter/kmer.h
Examining data/kmc-2.3+dfsg/kmer_counter/kmer_counter.cpp
Examining data/kmc-2.3+dfsg/kmer_counter/kxmer_set.h
Examining data/kmc-2.3+dfsg/kmer_counter/mem_disk_file.cpp
Examining data/kmc-2.3+dfsg/kmer_counter/mem_disk_file.h
Examining data/kmc-2.3+dfsg/kmer_counter/meta_oper.h
Examining data/kmc-2.3+dfsg/kmer_counter/mmer.cpp
Examining data/kmc-2.3+dfsg/kmer_counter/mmer.h
Examining data/kmc-2.3+dfsg/kmer_counter/params.h
Examining data/kmc-2.3+dfsg/kmer_counter/prob_qual.cpp
Examining data/kmc-2.3+dfsg/kmer_counter/prob_qual.h
Examining data/kmc-2.3+dfsg/kmer_counter/queues.h
Examining data/kmc-2.3+dfsg/kmer_counter/radix.h
Examining data/kmc-2.3+dfsg/kmer_counter/rev_byte.cpp
Examining data/kmc-2.3+dfsg/kmer_counter/rev_byte.h
Examining data/kmc-2.3+dfsg/kmer_counter/small_k_buf.h
Examining data/kmc-2.3+dfsg/kmer_counter/splitter.h
Examining data/kmc-2.3+dfsg/kmer_counter/stdafx.cpp
Examining data/kmc-2.3+dfsg/kmer_counter/stdafx.h
Examining data/kmc-2.3+dfsg/kmer_counter/targetver.h
Examining data/kmc-2.3+dfsg/kmer_counter/timer.cpp
Examining data/kmc-2.3+dfsg/kmer_counter/timer.h
Examining data/kmc-2.3+dfsg/kmer_counter/fastq_reader.h
Examining data/kmc-2.3+dfsg/kmer_counter/bkb_sorter.h
Examining data/kmc-2.3+dfsg/kmer_counter/kb_sorter.h
Examining data/kmc-2.3+dfsg/kmer_counter/s_mapper.h
Examining data/kmc-2.3+dfsg/kmer_counter/radix.cpp