Flawfinder version 2.0.10, (C) 2001-2019 David A. Wheeler.
Number of rules (primarily dangerous function names) in C/C++ ruleset: 223
Examining data/libmuscle-3.7+4565/libMUSCLE/clustset.h
Examining data/libmuscle-3.7+4565/libMUSCLE/msf.cpp
Examining data/libmuscle-3.7+4565/libMUSCLE/distpwkimura.cpp
Examining data/libmuscle-3.7+4565/libMUSCLE/setblosumweights.cpp
Examining data/libmuscle-3.7+4565/libMUSCLE/refine.h
Examining data/libmuscle-3.7+4565/libMUSCLE/nwdasimple.cpp
Examining data/libmuscle-3.7+4565/libMUSCLE/msadistkimura.cpp
Examining data/libmuscle-3.7+4565/libMUSCLE/fastdistnuc.cpp
Examining data/libmuscle-3.7+4565/libMUSCLE/distcalc.h
Examining data/libmuscle-3.7+4565/libMUSCLE/refinetreee.cpp
Examining data/libmuscle-3.7+4565/libMUSCLE/difftreese.cpp
Examining data/libmuscle-3.7+4565/libMUSCLE/refinesubfams.cpp
Examining data/libmuscle-3.7+4565/libMUSCLE/local.cpp
Examining data/libmuscle-3.7+4565/libMUSCLE/clust.h
Examining data/libmuscle-3.7+4565/libMUSCLE/edgelist.cpp
Examining data/libmuscle-3.7+4565/libMUSCLE/enumtostr.cpp
Examining data/libmuscle-3.7+4565/libMUSCLE/anchors.cpp
Examining data/libmuscle-3.7+4565/libMUSCLE/profdb.cpp
Examining data/libmuscle-3.7+4565/libMUSCLE/fastdistkmer.cpp
Examining data/libmuscle-3.7+4565/libMUSCLE/drawtree.cpp
Examining data/libmuscle-3.7+4565/libMUSCLE/aligngivenpath.cpp