Flawfinder version 2.0.10, (C) 2001-2019 David A. Wheeler.
Number of rules (primarily dangerous function names) in C/C++ ruleset: 223
Examining data/limereg-1.4.1/lib/matlab/pseudo_stdafx.h
Examining data/limereg-1.4.1/lib/matlab/matlab_c_ssdRigid2D.cpp
Examining data/limereg-1.4.1/lib/matlab/matlab_c_ssdRigid2D.h
Examining data/limereg-1.4.1/lib/matlab/codegeneration/limereg_rtwutil.h
Examining data/limereg-1.4.1/lib/matlab/codegeneration/diffimg.cpp
Examining data/limereg-1.4.1/lib/matlab/codegeneration/mod.cpp
Examining data/limereg-1.4.1/lib/matlab/codegeneration/mldivide.cpp
Examining data/limereg-1.4.1/lib/matlab/codegeneration/rtGetNaN.cpp
Examining data/limereg-1.4.1/lib/matlab/codegeneration/limereg_emxAPI.cpp
Examining data/limereg-1.4.1/lib/matlab/codegeneration/limereg_emxutil.h
Examining data/limereg-1.4.1/lib/matlab/codegeneration/generatePyramidPC.h
Examining data/limereg-1.4.1/lib/matlab/codegeneration/limereg_emxutil.cpp
Examining data/limereg-1.4.1/lib/matlab/codegeneration/limereg_emxAPI.h
Examining data/limereg-1.4.1/lib/matlab/codegeneration/norm.cpp
Examining data/limereg-1.4.1/lib/matlab/codegeneration/mldivide.h
Examining data/limereg-1.4.1/lib/matlab/codegeneration/limereg_types.h
Examining data/limereg-1.4.1/lib/matlab/codegeneration/rt_nonfinite.h
Examining data/limereg-1.4.1/lib/matlab/codegeneration/rtwtypes.h
Examining data/limereg-1.4.1/lib/matlab/codegeneration/mod.h
Examining data/limereg-1.4.1/lib/matlab/codegeneration/rtGetNaN.h
Examining data/limereg-1.4.1/lib/matlab/codegeneration/gaussnewton.cpp
Examining data/limereg-1.4.1/lib/matlab/codegeneration/limereg_initialize.cpp
Examining data/limereg-1.4.1/lib/matlab/codegeneration/norm.h
Examining data/limereg-1.4.1/lib/matlab/codegeneration/mpower.h
Examining data/limereg-1.4.1/lib/matlab/codegeneration/rtGetInf.cpp
Examining data/limereg-1.4.1/lib/matlab/codegeneration/limereg_rtwutil.cpp
Examining data/limereg-1.4.1/lib/matlab/codegeneration/mpower.cpp
Examining data/limereg-1.4.1/lib/matlab/codegeneration/jacobian.cpp
Examining data/limereg-1.4.1/lib/matlab/codegeneration/transform.h
Examining data/limereg-1.4.1/lib/matlab/codegeneration/limereg_initialize.h
Examining data/limereg-1.4.1/lib/matlab/codegeneration/rt_nonfinite.cpp
Examining data/limereg-1.4.1/lib/matlab/codegeneration/all.h
Examining data/limereg-1.4.1/lib/matlab/codegeneration/limereg_terminate.h
Examining data/limereg-1.4.1/lib/matlab/codegeneration/limereg_terminate.cpp
Examining data/limereg-1.4.1/lib/matlab/codegeneration/ssd.h
Examining data/limereg-1.4.1/lib/matlab/codegeneration/rtGetInf.h
Examining data/limereg-1.4.1/lib/matlab/codegeneration/generatePyramidPC.cpp
Examining data/limereg-1.4.1/lib/matlab/codegeneration/shrinkImageDSP.h
Examining data/limereg-1.4.1/lib/matlab/codegeneration/calcMarginAddition.h
Examining data/limereg-1.4.1/lib/matlab/codegeneration/calcMarginAddition.cpp
Examining data/limereg-1.4.1/lib/matlab/codegeneration/jacobian.h
Examining data/limereg-1.4.1/lib/matlab/codegeneration/shrinkImageDSP.cpp
Examining data/limereg-1.4.1/lib/matlab/codegeneration/ssd.cpp
Examining data/limereg-1.4.1/lib/matlab/codegeneration/all.cpp
Examining data/limereg-1.4.1/lib/matlab/codegeneration/diffimg.h
Examining data/limereg-1.4.1/lib/matlab/codegeneration/transform.cpp
Examining data/limereg-1.4.1/lib/matlab/codegeneration/gaussnewton.h
Examining data/limereg-1.4.1/lib/CMatlabArray.cpp
Examining data/limereg-1.4.1/lib/CMatlabArray.h
Examining data/limereg-1.4.1/lib/limereg_common.h
Examining data/limereg-1.4.1/lib/CRegistrator.cpp
Examining data/limereg-1.4.1/lib/export/limereg.h
Examining data/limereg-1.4.1/lib/export/limereg.cpp
Examining data/limereg-1.4.1/lib/CRegistrator.h
Examining data/limereg-1.4.1/lib/CMatlabArrayTypedefs.h
Examining data/limereg-1.4.1/lib/stdafx.cpp
Examining data/limereg-1.4.1/lib/stdafx.h
Examining data/limereg-1.4.1/lib/limereg_exceptions.h
Examining data/limereg-1.4.1/tests/test_commandLineTool.c
Examining data/limereg-1.4.1/tests/test_findAlignment.c
Examining data/limereg-1.4.1/tests/test_getVersion.c
Examining data/limereg-1.4.1/tests/test_common.h
Examining data/limereg-1.4.1/tests/test_searchSubimage.c
Examining data/limereg-1.4.1/exe/limereg_common.h
Examining data/limereg-1.4.1/exe/TimeMeasurement.h
Examining data/limereg-1.4.1/exe/CRegistrationController.h
Examining data/limereg-1.4.1/exe/main.cpp
Examining data/limereg-1.4.1/exe/targetver.h
Examining data/limereg-1.4.1/exe/stdafx.cpp
Examining data/limereg-1.4.1/exe/stdafx.h
Examining data/limereg-1.4.1/exe/CRegistrationController.cpp
Examining data/limereg-1.4.1/exe/CLogger.cpp
Examining data/limereg-1.4.1/exe/CLogger.h

FINAL RESULTS:

data/limereg-1.4.1/lib/matlab/codegeneration/generatePyramidPC.cpp:94:2:  [4] (format) sprintf:
  Potential format string problem (CWE-134). Make format string constant.
	sprintf(sFilename, sNameFormat, imgNo);
data/limereg-1.4.1/tests/test_commandLineTool.c:11:12:  [4] (shell) system:
  This causes a new program to execute and is difficult to use safely
  (CWE-78). try using a library call that implements the same functionality
  if available.
    return system(command);
data/limereg-1.4.1/lib/CRegistrator.cpp:100:2:  [2] (buffer) memcpy:
  Does not check for buffer overflows when copying to destination (CWE-120).
  Make sure destination can always hold the source data.
	memcpy(Rvec.GetCMemoryArrayPtr(), imgRef, iPixelAmount * sizeof(t_pixel));
data/limereg-1.4.1/lib/CRegistrator.cpp:101:2:  [2] (buffer) memcpy:
  Does not check for buffer overflows when copying to destination (CWE-120).
  Make sure destination can always hold the source data.
	memcpy(Tvec.GetCMemoryArrayPtr(), imgTmp, iPixelAmount * sizeof(t_pixel));
data/limereg-1.4.1/lib/CRegistrator.cpp:122:2:  [2] (buffer) memcpy:
  Does not check for buffer overflows when copying to destination (CWE-120).
  Make sure destination can always hold the source data.
	memcpy(Rvec.GetCMemoryArrayPtr(), imgRef, iPixelAmount * sizeof(t_pixel));
data/limereg-1.4.1/lib/CRegistrator.cpp:123:2:  [2] (buffer) memcpy:
  Does not check for buffer overflows when copying to destination (CWE-120).
  Make sure destination can always hold the source data.
	memcpy(Tvec.GetCMemoryArrayPtr(), imgTmp, iPixelAmount * sizeof(t_pixel));
data/limereg-1.4.1/lib/CRegistrator.cpp:129:2:  [2] (buffer) memcpy:
  Does not check for buffer overflows when copying to destination (CWE-120).
  Make sure destination can always hold the source data.
	memcpy(imgDst, Dvec.GetCMemoryArrayPtr(), iPixelAmount);
data/limereg-1.4.1/lib/CRegistrator.cpp:141:2:  [2] (buffer) memcpy:
  Does not check for buffer overflows when copying to destination (CWE-120).
  Make sure destination can always hold the source data.
	memcpy(Svec.GetCMemoryArrayPtr(), imgSrc, iPixelAmount * sizeof(t_pixel));
data/limereg-1.4.1/lib/CRegistrator.cpp:147:2:  [2] (buffer) memcpy:
  Does not check for buffer overflows when copying to destination (CWE-120).
  Make sure destination can always hold the source data.
	memcpy(imgDst, Dvec.GetCMemoryArrayPtr(), iPixelAmount);
data/limereg-1.4.1/lib/matlab/codegeneration/generatePyramidPC.cpp:93:2:  [2] (buffer) char:
  Statically-sized arrays can be improperly restricted, leading to potential
  overflows or other issues (CWE-119!/CWE-120). Perform bounds checking, use
  functions that limit length, or ensure that the size is larger than the
  maximum possible length.
	char sFilename[sizeof(sNameFormat)/*this is enough*/];
data/limereg-1.4.1/lib/matlab/codegeneration/generatePyramidPC.cpp:99:2:  [2] (buffer) memcpy:
  Does not check for buffer overflows when copying to destination (CWE-120).
  Make sure destination can always hold the source data.
	memcpy(topBuf, &start[yStart*xDim], markerWidth);
data/limereg-1.4.1/lib/matlab/codegeneration/generatePyramidPC.cpp:101:2:  [2] (buffer) memcpy:
  Does not check for buffer overflows when copying to destination (CWE-120).
  Make sure destination can always hold the source data.
	memcpy(bottomBuf, &start[yEnd*xDim], markerWidth);
data/limereg-1.4.1/lib/matlab/codegeneration/generatePyramidPC.cpp:114:2:  [2] (buffer) memcpy:
  Does not check for buffer overflows when copying to destination (CWE-120).
  Make sure destination can always hold the source data.
	memcpy((void*)&start[yStart*xDim], topBuf, markerWidth);
data/limereg-1.4.1/lib/matlab/codegeneration/generatePyramidPC.cpp:115:2:  [2] (buffer) memcpy:
  Does not check for buffer overflows when copying to destination (CWE-120).
  Make sure destination can always hold the source data.
	memcpy((void*)&start[yEnd*xDim], bottomBuf, markerWidth);
data/limereg-1.4.1/lib/matlab/codegeneration/generatePyramidPC.cpp:383:3:  [2] (buffer) memcpy:
  Does not check for buffer overflows when copying to destination (CWE-120).
  Make sure destination can always hold the source data.
		memcpy(&Tvec->data[i41], &Tvec_Wo_Margins[i39 - 1], loop_ub+1);
data/limereg-1.4.1/lib/matlab/codegeneration/limereg_emxutil.cpp:228:7:  [2] (buffer) memcpy:
  Does not check for buffer overflows when copying to destination (CWE-120).
  Make sure destination can always hold the source data.
      memcpy(newData, emxArray->data, (uint32_T)(elementSize * oldNumel));
data/limereg-1.4.1/tests/test_findAlignment.c:10:10:  [2] (buffer) char:
  Statically-sized arrays can be improperly restricted, leading to potential
  overflows or other issues (CWE-119!/CWE-120). Perform bounds checking, use
  functions that limit length, or ensure that the size is larger than the
  maximum possible length.
unsigned char imgRef[dim*dim];
data/limereg-1.4.1/tests/test_findAlignment.c:11:10:  [2] (buffer) char:
  Statically-sized arrays can be improperly restricted, leading to potential
  overflows or other issues (CWE-119!/CWE-120). Perform bounds checking, use
  functions that limit length, or ensure that the size is larger than the
  maximum possible length.
unsigned char imgTmp[dim*dim];
data/limereg-1.4.1/tests/test_searchSubimage.c:10:10:  [2] (buffer) char:
  Statically-sized arrays can be improperly restricted, leading to potential
  overflows or other issues (CWE-119!/CWE-120). Perform bounds checking, use
  functions that limit length, or ensure that the size is larger than the
  maximum possible length.
unsigned char imgRef[dim*dim];
data/limereg-1.4.1/tests/test_searchSubimage.c:11:10:  [2] (buffer) char:
  Statically-sized arrays can be improperly restricted, leading to potential
  overflows or other issues (CWE-119!/CWE-120). Perform bounds checking, use
  functions that limit length, or ensure that the size is larger than the
  maximum possible length.
unsigned char imgTmp[dim*dim];
data/limereg-1.4.1/exe/stdafx.h:79:32:  [1] (obsolete) usleep:
  This C routine is considered obsolete (as opposed to the shell command by
  the same name). The interaction of this function with SIGALRM and other
  timer functions such as sleep(), alarm(), setitimer(), and nanosleep() is
  unspecified (CWE-676). Use nanosleep(2) or setitimer(2) instead.
    inline void Sleep(int ms) {usleep(ms*1000);}
data/limereg-1.4.1/lib/stdafx.h:80:32:  [1] (obsolete) usleep:
  This C routine is considered obsolete (as opposed to the shell command by
  the same name). The interaction of this function with SIGALRM and other
  timer functions such as sleep(), alarm(), setitimer(), and nanosleep() is
  unspecified (CWE-676). Use nanosleep(2) or setitimer(2) instead.
    inline void Sleep(int ms) {usleep(ms*1000);}

ANALYSIS SUMMARY:

Hits = 22
Lines analyzed = 10145 in approximately 0.58 seconds (17483 lines/second)
Physical Source Lines of Code (SLOC) = 4606
Hits@level = [0]  41 [1]   2 [2]  18 [3]   0 [4]   2 [5]   0
Hits@level+ = [0+]  63 [1+]  22 [2+]  20 [3+]   2 [4+]   2 [5+]   0
Hits/KSLOC@level+ = [0+] 13.6778 [1+] 4.77638 [2+] 4.34216 [3+] 0.434216 [4+] 0.434216 [5+]   0
Dot directories skipped = 1 (--followdotdir overrides)
Minimum risk level = 1
Not every hit is necessarily a security vulnerability.
There may be other security vulnerabilities; review your code!
See 'Secure Programming HOWTO'
(https://dwheeler.com/secure-programs) for more information.