Flawfinder version 2.0.10, (C) 2001-2019 David A. Wheeler.
Number of rules (primarily dangerous function names) in C/C++ ruleset: 223
Examining data/t-coffee-13.41.0.28bdc39+dfsg/t_coffee_source/dev1_lib_header.h
Examining data/t-coffee-13.41.0.28bdc39+dfsg/t_coffee_source/fastal/iteration.c
Examining data/t-coffee-13.41.0.28bdc39+dfsg/t_coffee_source/fastal/parttree.h
Examining data/t-coffee-13.41.0.28bdc39+dfsg/t_coffee_source/fastal/fastal_opt_parsing.c
Examining data/t-coffee-13.41.0.28bdc39+dfsg/t_coffee_source/fastal/fastal_opt_parsing.h
Examining data/t-coffee-13.41.0.28bdc39+dfsg/t_coffee_source/fastal/scoring.c
Examining data/t-coffee-13.41.0.28bdc39+dfsg/t_coffee_source/fastal/iteration.h
Examining data/t-coffee-13.41.0.28bdc39+dfsg/t_coffee_source/fastal/diagonal.c
Examining data/t-coffee-13.41.0.28bdc39+dfsg/t_coffee_source/fastal/tree.c
Examining data/t-coffee-13.41.0.28bdc39+dfsg/t_coffee_source/fastal/fastal.c
Examining data/t-coffee-13.41.0.28bdc39+dfsg/t_coffee_source/fastal/fastal.h
Examining data/t-coffee-13.41.0.28bdc39+dfsg/t_coffee_source/fastal/parttree.c
Examining data/t-coffee-13.41.0.28bdc39+dfsg/t_coffee_source/fastal/diagonal.h
Examining data/t-coffee-13.41.0.28bdc39+dfsg/t_coffee_source/fastal/tree.h
Examining data/t-coffee-13.41.0.28bdc39+dfsg/t_coffee_source/fastal/scoring.h
Examining data/t-coffee-13.41.0.28bdc39+dfsg/t_coffee_source/dp_lib_header.h
Examining data/t-coffee-13.41.0.28bdc39+dfsg/t_coffee_source/dp_lib/util_domain_dp_drivers.h
Examining data/t-coffee-13.41.0.28bdc39+dfsg/t_coffee_source/dp_lib/util_dp_drivers.c
Examining data/t-coffee-13.41.0.28bdc39+dfsg/t_coffee_source/dp_lib/CUSTOM_evaluate_for_struc.h
Examining data/t-coffee-13.41.0.28bdc39+dfsg/t_coffee_source/dp_lib/util_domain_dp_drivers.c