=========================================================== .___ __ __ _________________ __ __ __| _/|__|/ |_ / ___\_` __ \__ \ | | \/ __ | | \\_ __\ / /_/ > | \// __ \| | / /_/ | | || | \___ /|__| (____ /____/\____ | |__||__| /_____/ \/ \/ grep rough audit - static analysis tool v2.8 written by @Wireghoul =================================[justanotherhacker.com]=== bornagain-1.16.0/.travis/linux/install.sh:1:docker build -t bornagain/wily -f `dirname $0`/Dockerfile . bornagain-1.16.0/.travis/linux/install.sh-2-docker run -d --name dd -it bornagain/wily ############################################## bornagain-1.16.0/Core/Tools/fp_exception_glibc_extension.c-198- bornagain-1.16.0/Core/Tools/fp_exception_glibc_extension.c:199:#define getfpscr(x) asm volatile ("mffs %0" : "=f" (x)); bornagain-1.16.0/Core/Tools/fp_exception_glibc_extension.c:200:#define setfpscr(x) asm volatile ("mtfsf 255,%0" : : "f" (x)); bornagain-1.16.0/Core/Tools/fp_exception_glibc_extension.c-201- ############################################## bornagain-1.16.0/Core/Tools/fp_exception_glibc_extension.c-214-// x87 fpu bornagain-1.16.0/Core/Tools/fp_exception_glibc_extension.c:215:#define getx87cr(x) asm ("fnstcw %0" : "=m" (x)); bornagain-1.16.0/Core/Tools/fp_exception_glibc_extension.c:216:#define setx87cr(x) asm ("fldcw %0" : "=m" (x)); bornagain-1.16.0/Core/Tools/fp_exception_glibc_extension.c:217:#define getx87sr(x) asm ("fnstsw %0" : "=m" (x)); bornagain-1.16.0/Core/Tools/fp_exception_glibc_extension.c-218- bornagain-1.16.0/Core/Tools/fp_exception_glibc_extension.c-219-// SIMD, gcc with Intel Core 2 Duo uses SSE2(4) bornagain-1.16.0/Core/Tools/fp_exception_glibc_extension.c:220:#define getmxcsr(x) asm ("stmxcsr %0" : "=m" (x)); bornagain-1.16.0/Core/Tools/fp_exception_glibc_extension.c:221:#define setmxcsr(x) asm ("ldmxcsr %0" : "=m" (x)); bornagain-1.16.0/Core/Tools/fp_exception_glibc_extension.c-222- ############################################## bornagain-1.16.0/Doc/UserManual/Assemblies.tex-991-\end{equation*} bornagain-1.16.0/Doc/UserManual/Assemblies.tex:992:where $D(\alpha_0,\alpha_1) = D_0 + \kappa \left[ \Delta R(\alpha_0) + \Delta R(\alpha_1) \right]$, with $\Delta R(\alpha_i)$ the deviation of a size parameter of particle $i$ with respect to the mean over all particles sizes/shapes and $\kappa$ the coupling parameter. bornagain-1.16.0/Doc/UserManual/Assemblies.tex-993- ############################################## bornagain-1.16.0/Doc/UserManual/Assemblies.tex-1048-\end{align} bornagain-1.16.0/Doc/UserManual/Assemblies.tex:1049:where $q_{\plll}$ is the component of the scattering beam in the plane of the interface ($\q=\k_i-\k_\sf$), $k_{i,z}$ and $k_{f,z}$ are the z-component of the incident and scattered beam, respectively. $R_i$, $R_f$ are the reflection coefficients in incidence and reflection. They are defined as\\ $R=\dfrac{k_z+\sqrt{n_s^2k_0^2-|k_{\plll}|^2}}{k_z-\sqrt{n_s^2 k_0^2-|k_{\plll}|^2}}$, where $n_s=1-\delta_s +i \beta_s$ is the refractive index of the substrate, $k_0$ is the wavelength in vacuum ($2\pi /\lambda$), $k_z$ and $k_{\plll}$ are the $z$-component and the in-plane component of $\k_\si$ or $\k_\sf$. \\ bornagain-1.16.0/Doc/UserManual/Assemblies.tex-1050- ############################################## bornagain-1.16.0/Doc/UserManual/Assemblies.tex-1527-\end{center} bornagain-1.16.0/Doc/UserManual/Assemblies.tex:1528:\caption{Schematics of the ideal 2D paracrystal. The gray-shaded areas mark the regions where the probability to find a node is larger that the width at half-maximum of the distribution. $L$ and $W$ are the mean inter-node distances along the two crystallographic axes. cl$_{(L,W),(x,y)}$ are the widths of the distribution of distance. The disorder is propagated as we add more nodes. Such a structure would be generated using \Code{InterferenceFunction2DParacrystal(L,W,90.*degrees,0,damp\_length)}, with \Code{pdf$_1$ = FTDistribution2DGauss(cl$_{L,x}$,cl$_{L,y}$)} and \Code{pdf$_2$ = FTDistribution2DGauss(cl$_{W,x}$,cl$_{W,y}$)}.} bornagain-1.16.0/Doc/UserManual/Assemblies.tex-1529-\label{fig:2dparaschematic} ############################################## bornagain-1.16.0/Doc/UserManual/Multilayers.tex-435-except for $l=0$, bornagain-1.16.0/Doc/UserManual/Multilayers.tex:436:where the special definition of $z_0$ (\cref{Fdefz}) implies $d_0=0$. bornagain-1.16.0/Doc/UserManual/Multilayers.tex-437-We consider the interface between layers $l$ and $l-1$, ############################################## bornagain-1.16.0/ThirdParty/Fit/RootMinimizers/mathcore/Math/PdfFuncMathCore.h-298- \f[ \phi(\lambda) = \frac{1}{2 \pi i}\int_{c-i\infty}^{c+i\infty} e^{\lambda s + s \log{s}} ds\f] bornagain-1.16.0/ThirdParty/Fit/RootMinimizers/mathcore/Math/PdfFuncMathCore.h:299: where \f$\lambda = (x-x_0)/\xi\f$. For a detailed description see bornagain-1.16.0/ThirdParty/Fit/RootMinimizers/mathcore/Math/PdfFuncMathCore.h-300- K.S. Kölbig and B. Schorr, A program package for the Landau distribution, ############################################## bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/README.md-12- bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/README.md:13:Suppose you put Google Test in directory `${GTEST_DIR}`. To build it, bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/README.md-14-create a library build target (or a project as called by Visual Studio ############################################## bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/README.md-18- bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/README.md:19:with `${GTEST_DIR}/include` in the system header search path and `${GTEST_DIR}` bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/README.md-20-in the normal header search path. Assuming a Linux-like system and gcc, ############################################## bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/README.md-29-Next, you should compile your test source file with bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/README.md:30:`${GTEST_DIR}/include` in the system header search path, and link it bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/README.md-31-with gtest and any other necessary libraries: ############################################## bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/AdvancedGuide.md-1889- bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/AdvancedGuide.md:1890:| `$ foo_test --gtest_repeat=1000` | Repeat foo\_test 1000 times and don't stop at failures. | bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/AdvancedGuide.md-1891-|:---------------------------------|:--------------------------------------------------------| bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/AdvancedGuide.md:1892:| `$ foo_test --gtest_repeat=-1` | A negative count means repeating forever. | bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/AdvancedGuide.md:1893:| `$ foo_test --gtest_repeat=1000 --gtest_break_on_failure` | Repeat foo\_test 1000 times, stopping at the first failure. This is especially useful when running under a debugger: when the testfails, it will drop into the debugger and you can then inspect variables and stacks. | bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/AdvancedGuide.md:1894:| `$ foo_test --gtest_repeat=1000 --gtest_filter=FooBar` | Repeat the tests whose name matches the filter 1000 times. | bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/AdvancedGuide.md-1895- ############################################## bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/FAQ.md-149-`Intermediate Directory` setting, change the value from bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/FAQ.md:150:`$(PlatformName)\$(ConfigurationName)` to bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/FAQ.md:151:`$(OutDir)\$(ProjectName)`. Click `OK` and then build the bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/FAQ.md-152-solution. When the build is complete, the 64-bit binaries will be in ############################################## bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/PumpManual.md-48- bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/PumpManual.md:49:The following Pump code (where meta keywords start with `$`, `[[` and `]]` are meta brackets, and `$$` starts a meta comment that ends with the line): bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/PumpManual.md-50- ############################################## bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/PumpManual.md-121- bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/PumpManual.md:122:| `$var id = exp` | Defines a named constant value. `$id` is valid util the end of the current meta lexical block. | bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/PumpManual.md-123-|:----------------|:-----------------------------------------------------------------------------------------------| bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/PumpManual.md:124:| `$range id exp..exp` | Sets the range of an iteration variable, which can be reused in multiple loops later. | bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/PumpManual.md:125:| `$for id sep [[ code ]]` | Iteration. The range of `id` must have been defined earlier. `$id` is valid in `code`. | bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/PumpManual.md:126:| `$($)` | Generates a single `$` character. | bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/PumpManual.md:127:| `$id` | Value of the named constant or iteration variable. | bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/PumpManual.md:128:| `$(exp)` | Value of the expression. | bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/PumpManual.md:129:| `$if exp [[ code ]] else_branch` | Conditional. | bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/PumpManual.md-130-| `[[ code ]]` | Meta lexical block. | bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/PumpManual.md-131-| `cpp_code` | Raw C++ code. | bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/PumpManual.md:132:| `$$ comment` | Meta comment. | bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/PumpManual.md-133- bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/PumpManual.md-134-**Note:** To give the user some freedom in formatting the Pump source bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/PumpManual.md:135:code, Pump ignores a new-line character if it's right after `$for foo` bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/PumpManual.md-136-or next to `[[` or `]]`. Without this rule you'll often be forced to write ############################################## bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/PumpManual.md-175- bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/PumpManual.md:176: * If a meta variable is followed by a letter or digit, you can separate them using `[[]]`, which inserts an empty string. For example `Foo$j[[]]Helper` generate `Foo1Helper` when `j` is 1. bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/PumpManual.md-177- * To avoid extra-long Pump source lines, you can break a line anywhere you want by inserting `[[]]` followed by a new line. Since any new-line character next to `[[` or `]]` is ignored, the generated code won't contain this new line. ############################################## bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_5_AdvancedGuide.md-1805- bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_5_AdvancedGuide.md:1806:| `$ foo_test --gtest_repeat=1000` | Repeat foo\_test 1000 times and don't stop at failures. | bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_5_AdvancedGuide.md-1807-|:---------------------------------|:--------------------------------------------------------| bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_5_AdvancedGuide.md:1808:| `$ foo_test --gtest_repeat=-1` | A negative count means repeating forever. | bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_5_AdvancedGuide.md:1809:| `$ foo_test --gtest_repeat=1000 --gtest_break_on_failure` | Repeat foo\_test 1000 times, stopping at the first failure. This is especially useful when running under a debugger: when the testfails, it will drop into the debugger and you can then inspect variables and stacks. | bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_5_AdvancedGuide.md:1810:| `$ foo_test --gtest_repeat=1000 --gtest_filter=FooBar` | Repeat the tests whose name matches the filter 1000 times. | bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_5_AdvancedGuide.md-1811- ############################################## bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_5_FAQ.md-55-`Intermediate Directory` setting, change the value from bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_5_FAQ.md:56:`$(PlatformName)\$(ConfigurationName)` to bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_5_FAQ.md:57:`$(OutDir)\$(ProjectName)`. Click `OK` and then build the bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_5_FAQ.md-58-solution. When the build is complete, the 64-bit binaries will be in ############################################## bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_5_PumpManual.md-48- bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_5_PumpManual.md:49:The following Pump code (where meta keywords start with `$`, `[[` and `]]` are meta brackets, and `$$` starts a meta comment that ends with the line): bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_5_PumpManual.md-50- ############################################## bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_5_PumpManual.md-121- bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_5_PumpManual.md:122:| `$var id = exp` | Defines a named constant value. `$id` is valid util the end of the current meta lexical block. | bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_5_PumpManual.md-123-|:----------------|:-----------------------------------------------------------------------------------------------| bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_5_PumpManual.md-124-| $range id exp..exp | Sets the range of an iteration variable, which can be reused in multiple loops later. | bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_5_PumpManual.md:125:| $for id sep [[code ](.md)] | Iteration. The range of `id` must have been defined earlier. `$id` is valid in `code`. | bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_5_PumpManual.md:126:| `$($)` | Generates a single `$` character. | bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_5_PumpManual.md:127:| `$id` | Value of the named constant or iteration variable. | bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_5_PumpManual.md:128:| `$(exp)` | Value of the expression. | bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_5_PumpManual.md:129:| `$if exp [[ code ]] else_branch` | Conditional. | bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_5_PumpManual.md-130-| `[[ code ]]` | Meta lexical block. | bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_5_PumpManual.md-131-| `cpp_code` | Raw C++ code. | bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_5_PumpManual.md:132:| `$$ comment` | Meta comment. | bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_5_PumpManual.md-133- bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_5_PumpManual.md-134-**Note:** To give the user some freedom in formatting the Pump source bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_5_PumpManual.md:135:code, Pump ignores a new-line character if it's right after `$for foo` bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_5_PumpManual.md-136-or next to `[[` or `]]`. Without this rule you'll often be forced to write ############################################## bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_5_PumpManual.md-175- bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_5_PumpManual.md:176: * If a meta variable is followed by a letter or digit, you can separate them using `[[]]`, which inserts an empty string. For example `Foo$j[[]]Helper` generate `Foo1Helper` when `j` is 1. bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_5_PumpManual.md-177- * To avoid extra-long Pump source lines, you can break a line anywhere you want by inserting `[[]]` followed by a new line. Since any new-line character next to `[[` or `]]` is ignored, the generated code won't contain this new line. ############################################## bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_6_AdvancedGuide.md-1887- bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_6_AdvancedGuide.md:1888:| `$ foo_test --gtest_repeat=1000` | Repeat foo\_test 1000 times and don't stop at failures. | bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_6_AdvancedGuide.md-1889-|:---------------------------------|:--------------------------------------------------------| bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_6_AdvancedGuide.md:1890:| `$ foo_test --gtest_repeat=-1` | A negative count means repeating forever. | bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_6_AdvancedGuide.md:1891:| `$ foo_test --gtest_repeat=1000 --gtest_break_on_failure` | Repeat foo\_test 1000 times, stopping at the first failure. This is especially useful when running under a debugger: when the testfails, it will drop into the debugger and you can then inspect variables and stacks. | bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_6_AdvancedGuide.md:1892:| `$ foo_test --gtest_repeat=1000 --gtest_filter=FooBar` | Repeat the tests whose name matches the filter 1000 times. | bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_6_AdvancedGuide.md-1893- ############################################## bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_6_FAQ.md-149-`Intermediate Directory` setting, change the value from bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_6_FAQ.md:150:`$(PlatformName)\$(ConfigurationName)` to bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_6_FAQ.md:151:`$(OutDir)\$(ProjectName)`. Click `OK` and then build the bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_6_FAQ.md-152-solution. When the build is complete, the 64-bit binaries will be in ############################################## bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_6_PumpManual.md-48- bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_6_PumpManual.md:49:The following Pump code (where meta keywords start with `$`, `[[` and `]]` are meta brackets, and `$$` starts a meta comment that ends with the line): bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_6_PumpManual.md-50- ############################################## bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_6_PumpManual.md-121- bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_6_PumpManual.md:122:| `$var id = exp` | Defines a named constant value. `$id` is valid util the end of the current meta lexical block. | bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_6_PumpManual.md-123-|:----------------|:-----------------------------------------------------------------------------------------------| bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_6_PumpManual.md:124:| `$range id exp..exp` | Sets the range of an iteration variable, which can be reused in multiple loops later. | bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_6_PumpManual.md:125:| `$for id sep [[ code ]]` | Iteration. The range of `id` must have been defined earlier. `$id` is valid in `code`. | bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_6_PumpManual.md:126:| `$($)` | Generates a single `$` character. | bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_6_PumpManual.md:127:| `$id` | Value of the named constant or iteration variable. | bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_6_PumpManual.md:128:| `$(exp)` | Value of the expression. | bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_6_PumpManual.md:129:| `$if exp [[ code ]] else_branch` | Conditional. | bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_6_PumpManual.md-130-| `[[ code ]]` | Meta lexical block. | bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_6_PumpManual.md-131-| `cpp_code` | Raw C++ code. | bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_6_PumpManual.md:132:| `$$ comment` | Meta comment. | bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_6_PumpManual.md-133- bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_6_PumpManual.md-134-**Note:** To give the user some freedom in formatting the Pump source bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_6_PumpManual.md:135:code, Pump ignores a new-line character if it's right after `$for foo` bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_6_PumpManual.md-136-or next to `[[` or `]]`. Without this rule you'll often be forced to write ############################################## bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_6_PumpManual.md-175- bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_6_PumpManual.md:176: * If a meta variable is followed by a letter or digit, you can separate them using `[[]]`, which inserts an empty string. For example `Foo$j[[]]Helper` generate `Foo1Helper` when `j` is 1. bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_6_PumpManual.md-177- * To avoid extra-long Pump source lines, you can break a line anywhere you want by inserting `[[]]` followed by a new line. Since any new-line character next to `[[` or `]]` is ignored, the generated code won't contain this new line. ############################################## bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_7_AdvancedGuide.md-1888- bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_7_AdvancedGuide.md:1889:| `$ foo_test --gtest_repeat=1000` | Repeat foo\_test 1000 times and don't stop at failures. | bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_7_AdvancedGuide.md-1890-|:---------------------------------|:--------------------------------------------------------| bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_7_AdvancedGuide.md:1891:| `$ foo_test --gtest_repeat=-1` | A negative count means repeating forever. | bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_7_AdvancedGuide.md:1892:| `$ foo_test --gtest_repeat=1000 --gtest_break_on_failure` | Repeat foo\_test 1000 times, stopping at the first failure. This is especially useful when running under a debugger: when the testfails, it will drop into the debugger and you can then inspect variables and stacks. | bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_7_AdvancedGuide.md:1893:| `$ foo_test --gtest_repeat=1000 --gtest_filter=FooBar` | Repeat the tests whose name matches the filter 1000 times. | bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_7_AdvancedGuide.md-1894- ############################################## bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_7_FAQ.md-149-`Intermediate Directory` setting, change the value from bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_7_FAQ.md:150:`$(PlatformName)\$(ConfigurationName)` to bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_7_FAQ.md:151:`$(OutDir)\$(ProjectName)`. Click `OK` and then build the bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_7_FAQ.md-152-solution. When the build is complete, the 64-bit binaries will be in ############################################## bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_7_PumpManual.md-48- bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_7_PumpManual.md:49:The following Pump code (where meta keywords start with `$`, `[[` and `]]` are meta brackets, and `$$` starts a meta comment that ends with the line): bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_7_PumpManual.md-50- ############################################## bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_7_PumpManual.md-121- bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_7_PumpManual.md:122:| `$var id = exp` | Defines a named constant value. `$id` is valid util the end of the current meta lexical block. | bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_7_PumpManual.md-123-|:----------------|:-----------------------------------------------------------------------------------------------| bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_7_PumpManual.md:124:| `$range id exp..exp` | Sets the range of an iteration variable, which can be reused in multiple loops later. | bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_7_PumpManual.md:125:| `$for id sep [[ code ]]` | Iteration. The range of `id` must have been defined earlier. `$id` is valid in `code`. | bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_7_PumpManual.md:126:| `$($)` | Generates a single `$` character. | bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_7_PumpManual.md:127:| `$id` | Value of the named constant or iteration variable. | bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_7_PumpManual.md:128:| `$(exp)` | Value of the expression. | bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_7_PumpManual.md:129:| `$if exp [[ code ]] else_branch` | Conditional. | bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_7_PumpManual.md-130-| `[[ code ]]` | Meta lexical block. | bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_7_PumpManual.md-131-| `cpp_code` | Raw C++ code. | bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_7_PumpManual.md:132:| `$$ comment` | Meta comment. | bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_7_PumpManual.md-133- bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_7_PumpManual.md-134-**Note:** To give the user some freedom in formatting the Pump source bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_7_PumpManual.md:135:code, Pump ignores a new-line character if it's right after `$for foo` bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_7_PumpManual.md-136-or next to `[[` or `]]`. Without this rule you'll often be forced to write ############################################## bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_7_PumpManual.md-175- bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_7_PumpManual.md:176: * If a meta variable is followed by a letter or digit, you can separate them using `[[]]`, which inserts an empty string. For example `Foo$j[[]]Helper` generate `Foo1Helper` when `j` is 1. bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/docs/V1_7_PumpManual.md-177- * To avoid extra-long Pump source lines, you can break a line anywhere you want by inserting `[[]]` followed by a new line. Since any new-line character next to `[[` or `]]` is ignored, the generated code won't contain this new line. ############################################## bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/m4/gtest.m4-58- AS_IF([test "x${HAVE_GTEST}" = "xyes"], bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/m4/gtest.m4:59: [GTEST_CPPFLAGS=`${GTEST_CONFIG} --cppflags` bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/m4/gtest.m4:60: GTEST_CXXFLAGS=`${GTEST_CONFIG} --cxxflags` bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/m4/gtest.m4:61: GTEST_LDFLAGS=`${GTEST_CONFIG} --ldflags` bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/m4/gtest.m4:62: GTEST_LIBS=`${GTEST_CONFIG} --libs` bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/m4/gtest.m4:63: GTEST_VERSION=`${GTEST_CONFIG} --version` bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/m4/gtest.m4-64- AC_DEFINE([HAVE_GTEST],[1],[Defined when Google Test is available.])], ############################################## bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/scripts/gtest-config.in-205-bindir="@bindir@" bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/scripts/gtest-config.in:206:this_relative_bindir=`dirname $0` bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/scripts/gtest-config.in:207:this_bindir=`cd ${this_relative_bindir}; pwd -P` bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/scripts/gtest-config.in-208-if test "${this_bindir}" = "${this_bindir%${bindir}}"; then ############################################## bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/scripts/gtest-config.in-210- # assume that we are in a build tree. bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/scripts/gtest-config.in:211: build_dir=`dirname ${this_bindir}` bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/scripts/gtest-config.in:212: src_dir=`cd ${this_bindir}; cd @top_srcdir@; pwd -P` bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/scripts/gtest-config.in-213- ############################################## bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/src/gtest.cc-3105- } else { bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/src/gtest.cc:3106: printf(", where %s = %s\n", kTypeParamLabel, test_case.type_param()); bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/src/gtest.cc-3107- } ############################################## bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/src/gtest.cc-4883- // the output easy to parse by a program. bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/src/gtest.cc:4884: PrintOnOneLine(test_case->type_param(), kMaxParamLength); bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/src/gtest.cc-4885- } ############################################## bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/src/gtest.cc-4892- // output easy to parse by a program. bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/src/gtest.cc:4893: PrintOnOneLine(test_info->value_param(), kMaxParamLength); bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/src/gtest.cc-4894- } ############################################## bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/test/gtest-param-test_test.cc-806- bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/test/gtest-param-test_test.cc:807: EXPECT_EQ(::testing::PrintToString(GetParam()), test_info->value_param()); bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/test/gtest-param-test_test.cc-808-} ############################################## bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/test/gtest-param-test_test.cc-980- bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/test/gtest-param-test_test.cc:981: EXPECT_EQ(::testing::PrintToString(GetParam()), test_info->value_param()); bornagain-1.16.0/ThirdParty/common/gtest/gtest-1.8.0/test/gtest-param-test_test.cc-982-} ############################################## bornagain-1.16.0/cmake/bornagain/modules/NSIS.template.in-355- Push "$0;" bornagain-1.16.0/cmake/bornagain/modules/NSIS.template.in:356: Call un.StrStr ; Find `$0;` in $1 bornagain-1.16.0/cmake/bornagain/modules/NSIS.template.in-357- Pop $2 ; pos of our dir ############################################## bornagain-1.16.0/cmake/bornagain/modules/SearchInstalledSoftware.cmake-81- find_package(SWIG 3.0 REQUIRED) bornagain-1.16.0/cmake/bornagain/modules/SearchInstalledSoftware.cmake:82: include(${SWIG_USE_FILE}) bornagain-1.16.0/cmake/bornagain/modules/SearchInstalledSoftware.cmake-83- message(STATUS "Found SWIG version ${SWIG_VERSION} at ${SWIG_EXECUTABLE} with flags '${SWIG_FLAGS}'; CMake definitions in ${SWIG_USE_FILE}") ############################################## bornagain-1.16.0/cmake/bornagain/scripts/thisbornagain.csh.in-21-if ("$ARGS" != "") then bornagain-1.16.0/cmake/bornagain/scripts/thisbornagain.csh.in:22: set thisbornagain="`dirname ${ARGS[2]}`" bornagain-1.16.0/cmake/bornagain/scripts/thisbornagain.csh.in-23-else ############################################## bornagain-1.16.0/cmake/bornagain/scripts/thisbornagain.csh.in-51- bornagain-1.16.0/cmake/bornagain/scripts/thisbornagain.csh.in:52:setenv BORNAGAINSYS "`(cd ${thisbornagain}/..;pwd)`" bornagain-1.16.0/cmake/bornagain/scripts/thisbornagain.csh.in-53- ############################################## bornagain-1.16.0/cmake/generic/modules/FindGSL.cmake-34-# bornagain-1.16.0/cmake/generic/modules/FindGSL.cmake:35:# This script expects to find libraries at ``$GSL_ROOT_DIR/lib`` and the GSL bornagain-1.16.0/cmake/generic/modules/FindGSL.cmake:36:# headers at ``$GSL_ROOT_DIR/include/gsl``. The library directory may bornagain-1.16.0/cmake/generic/modules/FindGSL.cmake-37-# optionally provide Release and Debug folders. For Unix-like systems, this bornagain-1.16.0/cmake/generic/modules/FindGSL.cmake:38:# script will use ``$GSL_ROOT_DIR/bin/gsl-config`` (if found) to aid in the bornagain-1.16.0/cmake/generic/modules/FindGSL.cmake-39-# discovery GSL. ############################################## bornagain-1.16.0/cmake/generic/modules/FindGSL.cmake-68-# Include these modules to handle the QUIETLY and REQUIRED arguments. bornagain-1.16.0/cmake/generic/modules/FindGSL.cmake:69:#include(${CMAKE_CURRENT_LIST_DIR}/FindPackageHandleStandardArgs.cmake) # original bornagain-1.16.0/cmake/generic/modules/FindGSL.cmake-70-include(FindPackageHandleStandardArgs) # patched JWu 4/16 ############################################## bornagain-1.16.0/.pc/0002-use-the-system-eigen3.patch/cmake/bornagain/modules/SearchInstalledSoftware.cmake-87- find_package(SWIG 3.0 REQUIRED) bornagain-1.16.0/.pc/0002-use-the-system-eigen3.patch/cmake/bornagain/modules/SearchInstalledSoftware.cmake:88: include(${SWIG_USE_FILE}) bornagain-1.16.0/.pc/0002-use-the-system-eigen3.patch/cmake/bornagain/modules/SearchInstalledSoftware.cmake-89- message(STATUS "Found SWIG version ${SWIG_VERSION} at ${SWIG_EXECUTABLE} with flags '${SWIG_FLAGS}'; CMake definitions in ${SWIG_USE_FILE}") ############################################## bornagain-1.16.0/.pc/0005-Add-3.8-to-list-of-supported-python-versions.patch/cmake/bornagain/modules/SearchInstalledSoftware.cmake-81- find_package(SWIG 3.0 REQUIRED) bornagain-1.16.0/.pc/0005-Add-3.8-to-list-of-supported-python-versions.patch/cmake/bornagain/modules/SearchInstalledSoftware.cmake:82: include(${SWIG_USE_FILE}) bornagain-1.16.0/.pc/0005-Add-3.8-to-list-of-supported-python-versions.patch/cmake/bornagain/modules/SearchInstalledSoftware.cmake-83- message(STATUS "Found SWIG version ${SWIG_VERSION} at ${SWIG_EXECUTABLE} with flags '${SWIG_FLAGS}'; CMake definitions in ${SWIG_USE_FILE}")