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/ ___\_` __ \__ \ | | \/ __ | | \\_ __\
/ /_/ > | \// __ \| | / /_/ | | || |
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grep rough audit - static analysis tool
v2.8 written by @Wireghoul
=================================[justanotherhacker.com]===
iqtree-1.6.12+dfsg/CMakeLists.txt-439-##################################################################
iqtree-1.6.12+dfsg/CMakeLists.txt:440:include (${CMAKE_ROOT}/Modules/CheckFunctionExists.cmake)
iqtree-1.6.12+dfsg/CMakeLists.txt-441-check_function_exists (gettimeofday HAVE_GETTIMEOFDAY)
##############################################
iqtree-1.6.12+dfsg/pll/cycle.h-195-typedef LARGE_INTEGER ticks;
iqtree-1.6.12+dfsg/pll/cycle.h:196:#define RDTSC __asm __emit 0fh __asm __emit 031h /* hack for VC++ 5.0 */
iqtree-1.6.12+dfsg/pll/cycle.h-197-
##############################################
iqtree-1.6.12+dfsg/pll/cycle.h-201-
iqtree-1.6.12+dfsg/pll/cycle.h:202: __asm {
iqtree-1.6.12+dfsg/pll/cycle.h-203- RDTSC
##############################################
iqtree-1.6.12+dfsg/pll/cycle.h-228- unsigned a, d;
iqtree-1.6.12+dfsg/pll/cycle.h:229: __asm volatile("rdtsc" : "=a" (a), "=d" (d));
iqtree-1.6.12+dfsg/pll/cycle.h-230- return ((ticks)a) | (((ticks)d) << 32);
##############################################
iqtree-1.6.12+dfsg/pll/hardware.c-31- *ecx = count;
iqtree-1.6.12+dfsg/pll/hardware.c:32: asm volatile("cpuid"
iqtree-1.6.12+dfsg/pll/hardware.c-33- : "=a" (*eax),
##############################################
iqtree-1.6.12+dfsg/pll/pthread.h-369- *
iqtree-1.6.12+dfsg/pll/pthread.h:370: * _POSIX_THREAD_ATTR_STACKADDR (== -1)
iqtree-1.6.12+dfsg/pll/pthread.h-371- * If == 200112L, you can allocate and control a thread's
##############################################
iqtree-1.6.12+dfsg/pll/pthread.h-897-
iqtree-1.6.12+dfsg/pll/pthread.h:898:PTW32_DLLPORT int PTW32_CDECL pthread_attr_getstackaddr (const pthread_attr_t * attr,
iqtree-1.6.12+dfsg/pll/pthread.h-899- void **stackaddr);
##############################################
iqtree-1.6.12+dfsg/pll/pthread.h-906-
iqtree-1.6.12+dfsg/pll/pthread.h:907:PTW32_DLLPORT int PTW32_CDECL pthread_attr_setstackaddr (pthread_attr_t * attr,
iqtree-1.6.12+dfsg/pll/pthread.h-908- void *stackaddr);
##############################################
iqtree-1.6.12+dfsg/test_scripts/compile.sh-61-#Determine hash code of current branch
iqtree-1.6.12+dfsg/test_scripts/compile.sh:62:#branch=`git status | grep "On branch" | awk '{print $3}'`
iqtree-1.6.12+dfsg/test_scripts/compile.sh-63-branch=$1
##############################################
iqtree-1.6.12+dfsg/test_scripts/compile.sh-67-#Take the first 6 characters of the current head commit
iqtree-1.6.12+dfsg/test_scripts/compile.sh:68:commit_cur=`git log | head -n1 | awk '{print $2}' | cut -c 1-6`
iqtree-1.6.12+dfsg/test_scripts/compile.sh-69-
iqtree-1.6.12+dfsg/test_scripts/compile.sh-70-#Assign names to build and binary directories
iqtree-1.6.12+dfsg/test_scripts/compile.sh:71:flagSuffix=`echo ${flags} | sed 's/ /-/g'`
iqtree-1.6.12+dfsg/test_scripts/compile.sh-72-buildDir="build-${branch}-${flagSuffix}"
##############################################
iqtree-1.6.12+dfsg/test_scripts/compile.sh-95-git fetch
iqtree-1.6.12+dfsg/test_scripts/compile.sh:96:curBranch=`git status | grep 'On branch' | awk '{print $3}'`
iqtree-1.6.12+dfsg/test_scripts/compile.sh-97-if [[ ${curBranch} != ${branch} ]]
##############################################
iqtree-1.6.12+dfsg/vectorclass/instrset_detect.cpp-37-
iqtree-1.6.12+dfsg/vectorclass/instrset_detect.cpp:38: __asm {
iqtree-1.6.12+dfsg/vectorclass/instrset_detect.cpp-39- mov eax, functionnumber
##############################################
iqtree-1.6.12+dfsg/vectorclass/instrset_detect.cpp-66- uint32_t a, d;
iqtree-1.6.12+dfsg/vectorclass/instrset_detect.cpp:67: __asm {
iqtree-1.6.12+dfsg/vectorclass/instrset_detect.cpp-68- mov ecx, ctr
##############################################
iqtree-1.6.12+dfsg/vectorclass/vectormath_lib.h-923-#else // Windows
iqtree-1.6.12+dfsg/vectorclass/vectormath_lib.h:924: _asm movaps r_cos, xmm1;
iqtree-1.6.12+dfsg/vectorclass/vectormath_lib.h-925-#endif
##############################################
iqtree-1.6.12+dfsg/vectorclass/vectormath_lib.h-934-#else // Windows
iqtree-1.6.12+dfsg/vectorclass/vectormath_lib.h:935: _asm movapd r_cos, xmm1;
iqtree-1.6.12+dfsg/vectorclass/vectormath_lib.h-936-#endif
##############################################
iqtree-1.6.12+dfsg/vectorclass/vectormath_lib.h-1232-#else // Windows
iqtree-1.6.12+dfsg/vectorclass/vectormath_lib.h:1233: _asm vmovaps r_cos, ymm1;
iqtree-1.6.12+dfsg/vectorclass/vectormath_lib.h-1234-#endif
##############################################
iqtree-1.6.12+dfsg/vectorclass/vectormath_lib.h-1243-#else // Windows
iqtree-1.6.12+dfsg/vectorclass/vectormath_lib.h:1244: _asm vmovapd r_cos, ymm1;
iqtree-1.6.12+dfsg/vectorclass/vectormath_lib.h-1245-#endif
##############################################
iqtree-1.6.12+dfsg/debian/Documents_source/create_example_script-8-else
iqtree-1.6.12+dfsg/debian/Documents_source/create_example_script:9: EXAMPLEFILE=\`find \$CURDIR -name example.phy | head -n 1\`
iqtree-1.6.12+dfsg/debian/Documents_source/create_example_script:10: EXAMPLEDIR=\`dirname \$EXAMPLEFILE\`
iqtree-1.6.12+dfsg/debian/Documents_source/create_example_script-11-fi
##############################################
iqtree-1.6.12+dfsg/debian/Documents_source/create_example_script-14-if [ "\$ADTTMP" = "" ] ; then
iqtree-1.6.12+dfsg/debian/Documents_source/create_example_script:15: ADTTMP=\`mktemp -d /tmp/\${pkg}-test.XXXXXX\`
iqtree-1.6.12+dfsg/debian/Documents_source/create_example_script-16-fi
##############################################
iqtree-1.6.12+dfsg/debian/Documents_source/create_example_script-22-if [ "\$PATHTOEXE" = "" ] ; then
iqtree-1.6.12+dfsg/debian/Documents_source/create_example_script:23: PATHTOEXE=\`find \$CURDIR -name iqtree -type f -executable\`
iqtree-1.6.12+dfsg/debian/Documents_source/create_example_script-24-fi
iqtree-1.6.12+dfsg/debian/Documents_source/create_example_script-25-#if [ "\$PATHTOEXE" = "" ] ; then
iqtree-1.6.12+dfsg/debian/Documents_source/create_example_script:26:# PATHTOEXE=\`find \$CURDIR -name iqtree -type l\`
iqtree-1.6.12+dfsg/debian/Documents_source/create_example_script-27-#fi
##############################################
iqtree-1.6.12+dfsg/debian/Documents_source/example.sh-5-else
iqtree-1.6.12+dfsg/debian/Documents_source/example.sh:6: EXAMPLEFILE=`find $CURDIR -name example.phy | head -n 1`
iqtree-1.6.12+dfsg/debian/Documents_source/example.sh:7: EXAMPLEDIR=`dirname $EXAMPLEFILE`
iqtree-1.6.12+dfsg/debian/Documents_source/example.sh-8-fi
##############################################
iqtree-1.6.12+dfsg/debian/Documents_source/example.sh-11-if [ "$AUTOPKGTEST_TMP" = "" ] ; then
iqtree-1.6.12+dfsg/debian/Documents_source/example.sh:12: AUTOPKGTEST_TMP=`mktemp -d /tmp/${pkg}-test.XXXXXX`
iqtree-1.6.12+dfsg/debian/Documents_source/example.sh-13- trap "rm -rf $AUTOPKGTEST_TMP" 0 INT QUIT ABRT PIPE TERM
##############################################
iqtree-1.6.12+dfsg/debian/Documents_source/example.sh-21-if [ "$PATHTOEXE" = "" ] ; then
iqtree-1.6.12+dfsg/debian/Documents_source/example.sh:22: PATHTOEXE=`find $CURDIR -name iqtree -type f -executable`
iqtree-1.6.12+dfsg/debian/Documents_source/example.sh-23-fi
##############################################
iqtree-1.6.12+dfsg/debian/Documents_source/example.sh-25-if [ "$PATHTOEXEOMP" = "" ] ; then
iqtree-1.6.12+dfsg/debian/Documents_source/example.sh:26: PATHTOEXE=`find $CURDIR -name iqtree-omp -type f -executable`
iqtree-1.6.12+dfsg/debian/Documents_source/example.sh-27-fi
iqtree-1.6.12+dfsg/debian/Documents_source/example.sh-28-#if [ "$PATHTOEXE" = "" ] ; then
iqtree-1.6.12+dfsg/debian/Documents_source/example.sh:29:# PATHTOEXE=`find $CURDIR -name iqtree -type l`
iqtree-1.6.12+dfsg/debian/Documents_source/example.sh-30-#fi
##############################################
iqtree-1.6.12+dfsg/debian/rules-68- # use only the first example for build time test to save time on autobuilders
iqtree-1.6.12+dfsg/debian/rules:69:# if [ "`find $(CURDIR) -name iqtree -type f -executable`" = "" ] ; then \
iqtree-1.6.12+dfsg/debian/rules:70:# iqtreeomp=`find $(CURDIR) -name iqtree-omp -type f -executable` ; \
iqtree-1.6.12+dfsg/debian/rules:71:# ln -s iqtree-omp `dirname $$iqtreeomp`/iqtree ; \
iqtree-1.6.12+dfsg/debian/rules-72-# fi
##############################################
iqtree-1.6.12+dfsg/debian/tests/run-unit-test-5-else
iqtree-1.6.12+dfsg/debian/tests/run-unit-test:6: EXAMPLEFILE=`find $CURDIR -name example.phy | head -n 1`
iqtree-1.6.12+dfsg/debian/tests/run-unit-test:7: EXAMPLEDIR=`dirname $EXAMPLEFILE`
iqtree-1.6.12+dfsg/debian/tests/run-unit-test-8-fi
##############################################
iqtree-1.6.12+dfsg/debian/tests/run-unit-test-11-if [ "$AUTOPKGTEST_TMP" = "" ] ; then
iqtree-1.6.12+dfsg/debian/tests/run-unit-test:12: AUTOPKGTEST_TMP=`mktemp -d /tmp/${pkg}-test.XXXXXX`
iqtree-1.6.12+dfsg/debian/tests/run-unit-test-13- trap "rm -rf $AUTOPKGTEST_TMP" 0 INT QUIT ABRT PIPE TERM
##############################################
iqtree-1.6.12+dfsg/debian/tests/run-unit-test-21-if [ "$PATHTOEXE" = "" ] ; then
iqtree-1.6.12+dfsg/debian/tests/run-unit-test:22: PATHTOEXE=`find $CURDIR -name iqtree -type f -executable`
iqtree-1.6.12+dfsg/debian/tests/run-unit-test-23-fi
##############################################
iqtree-1.6.12+dfsg/debian/tests/run-unit-test-25-if [ "$PATHTOEXEOMP" = "" ] ; then
iqtree-1.6.12+dfsg/debian/tests/run-unit-test:26: PATHTOEXE=`find $CURDIR -name iqtree-omp -type f -executable`
iqtree-1.6.12+dfsg/debian/tests/run-unit-test-27-fi
iqtree-1.6.12+dfsg/debian/tests/run-unit-test-28-#if [ "$PATHTOEXE" = "" ] ; then
iqtree-1.6.12+dfsg/debian/tests/run-unit-test:29:# PATHTOEXE=`find $CURDIR -name iqtree -type l`
iqtree-1.6.12+dfsg/debian/tests/run-unit-test-30-#fi