=========================================================== .___ __ __ _________________ __ __ __| _/|__|/ |_ / ___\_` __ \__ \ | | \/ __ | | \\_ __\ / /_/ > | \// __ \| | / /_/ | | || | \___ /|__| (____ /____/\____ | |__||__| /_____/ \/ \/ grep rough audit - static analysis tool v2.8 written by @Wireghoul =================================[justanotherhacker.com]=== kissplice-2.5.3/build/CPackSourceConfig.cmake-94-if(EXISTS ${CPACK_PROPERTIES_FILE}) kissplice-2.5.3/build/CPackSourceConfig.cmake:95: include(${CPACK_PROPERTIES_FILE}) kissplice-2.5.3/build/CPackSourceConfig.cmake-96-endif() ############################################## kissplice-2.5.3/build/CPackConfig.cmake-88-if(EXISTS ${CPACK_PROPERTIES_FILE}) kissplice-2.5.3/build/CPackConfig.cmake:89: include(${CPACK_PROPERTIES_FILE}) kissplice-2.5.3/build/CPackConfig.cmake-90-endif() ############################################## kissplice-2.5.3/build/bcalm/ext/gatb-core/thirdparty/hdf5/hdf5-config.cmake-105- if (${HDF5_PACKAGE_NAME}_ENABLE_Z_LIB_SUPPORT AND ${HDF5_PACKAGE_NAME}_PACKAGE_EXTLIBS AND NOT TARGET "zlib") kissplice-2.5.3/build/bcalm/ext/gatb-core/thirdparty/hdf5/hdf5-config.cmake:106: include (${PACKAGE_PREFIX_DIR}//home/vincent/KisSplice/kissplice/build/bcalm/ext/gatb-core/share/Release/-targets.cmake) kissplice-2.5.3/build/bcalm/ext/gatb-core/thirdparty/hdf5/hdf5-config.cmake-107- endif () kissplice-2.5.3/build/bcalm/ext/gatb-core/thirdparty/hdf5/hdf5-config.cmake-108- if (${HDF5_PACKAGE_NAME}_ENABLE_SZIP_SUPPORT AND ${HDF5_PACKAGE_NAME}_PACKAGE_EXTLIBS AND NOT TARGET "szip") kissplice-2.5.3/build/bcalm/ext/gatb-core/thirdparty/hdf5/hdf5-config.cmake:109: include (${PACKAGE_PREFIX_DIR}//home/vincent/KisSplice/kissplice/build/bcalm/ext/gatb-core/share/Release/-targets.cmake) kissplice-2.5.3/build/bcalm/ext/gatb-core/thirdparty/hdf5/hdf5-config.cmake-110- endif () kissplice-2.5.3/build/bcalm/ext/gatb-core/thirdparty/hdf5/hdf5-config.cmake:111: include (${PACKAGE_PREFIX_DIR}//home/vincent/KisSplice/kissplice/build/bcalm/ext/gatb-core/share/Release/hdf5-targets.cmake) kissplice-2.5.3/build/bcalm/ext/gatb-core/thirdparty/hdf5/hdf5-config.cmake-112-endif () ############################################## kissplice-2.5.3/bcalm/.travis.yml-19-install: kissplice-2.5.3/bcalm/.travis.yml:20: - if [ "`echo $CXX`" == "g++" ] && [ "$TRAVIS_OS_NAME" == "linux" ]; then export CXX=g++-4.8; fi kissplice-2.5.3/bcalm/.travis.yml:21: - if [ "`echo $CXX`" == "clang++" ] && [ "$TRAVIS_OS_NAME" == "linux" ]; then export CXX=clang++-3.7; fi kissplice-2.5.3/bcalm/.travis.yml-22-matrix: ############################################## kissplice-2.5.3/bcalm/gatb-core/.travis.yml-19-install: kissplice-2.5.3/bcalm/gatb-core/.travis.yml:20:- if [ "`echo $CXX`" == "g++" ] && [ "$TRAVIS_OS_NAME" == "linux" ]; then export CXX=g++-4.8; fi kissplice-2.5.3/bcalm/gatb-core/.travis.yml:21:- if [ "`echo $CXX`" == "clang++" ] && [ "$TRAVIS_OS_NAME" == "linux" ]; then export CXX=clang++-3.7; fi kissplice-2.5.3/bcalm/gatb-core/.travis.yml-22-matrix: ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/scripts/git_tag_manager.sh-75-done kissplice-2.5.3/bcalm/gatb-core/gatb-core/scripts/git_tag_manager.sh:76:shift `expr $OPTIND - 1` kissplice-2.5.3/bcalm/gatb-core/gatb-core/scripts/git_tag_manager.sh-77- ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/scripts/git_tag_manager.sh-93-# Check whether provided tag already exists on repository kissplice-2.5.3/bcalm/gatb-core/gatb-core/scripts/git_tag_manager.sh:94:curTag=`git tag -l $TAG` kissplice-2.5.3/bcalm/gatb-core/gatb-core/scripts/git_tag_manager.sh-95-if [ ! -z "$curTag" ]; then ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/scripts/make_official_release.sh-137-done kissplice-2.5.3/bcalm/gatb-core/gatb-core/scripts/make_official_release.sh:138:shift `expr $OPTIND - 1` kissplice-2.5.3/bcalm/gatb-core/gatb-core/scripts/make_official_release.sh-139- ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/scripts/github_release_manager.sh-78-done kissplice-2.5.3/bcalm/gatb-core/gatb-core/scripts/github_release_manager.sh:79:shift `expr $OPTIND - 1` kissplice-2.5.3/bcalm/gatb-core/gatb-core/scripts/github_release_manager.sh-80- ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/scripts/test-github_release_api.sh-42-done kissplice-2.5.3/bcalm/gatb-core/gatb-core/scripts/test-github_release_api.sh:43:shift `expr $OPTIND - 1` kissplice-2.5.3/bcalm/gatb-core/gatb-core/scripts/test-github_release_api.sh-44- ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/scripts/NewProject/NewProject.sh-192-done kissplice-2.5.3/bcalm/gatb-core/gatb-core/scripts/NewProject/NewProject.sh:193:shift `expr $OPTIND - 1` kissplice-2.5.3/bcalm/gatb-core/gatb-core/scripts/NewProject/NewProject.sh-194- ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/scripts/NewProject/NewProject.sh-213-# Check how this script is called to figure out how to handle GATB-Core dependency kissplice-2.5.3/bcalm/gatb-core/gatb-core/scripts/NewProject/NewProject.sh:214:ABS_PATH=`cd "$INSTALL_DIRECTORY"; pwd` kissplice-2.5.3/bcalm/gatb-core/gatb-core/scripts/NewProject/NewProject.sh-215-if [[ "$ABS_PATH" =~ "gatb-tools/tools" ]]; then ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/scripts/NewProject/package_tool.sh-66-done kissplice-2.5.3/bcalm/gatb-core/gatb-core/scripts/NewProject/package_tool.sh:67:shift `expr $OPTIND - 1` kissplice-2.5.3/bcalm/gatb-core/gatb-core/scripts/NewProject/package_tool.sh-68- ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5ls/testh5ls.sh.in-176- # make cp fail kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5ls/testh5ls.sh.in:177: SDIR=`$DIRNAME $tstfile` kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5ls/testh5ls.sh.in:178: INODE_SDIR=`$LS -i -d $SDIR | $AWK -F' ' '{print $1}'` kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5ls/testh5ls.sh.in:179: INODE_DDIR=`$LS -i -d $TESTDIR | $AWK -F' ' '{print $1}'` kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5ls/testh5ls.sh.in-180- if [ "$INODE_SDIR" != "$INODE_DDIR" ]; then ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5ls/testh5ls.sh.in-197- # make cp fail kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5ls/testh5ls.sh.in:198: SDIR=`$DIRNAME $tstfile` kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5ls/testh5ls.sh.in:199: INODE_SDIR=`$LS -i -d $SDIR | $AWK -F' ' '{print $1}'` kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5ls/testh5ls.sh.in:200: INODE_DDIR=`$LS -i -d $TESTDIR | $AWK -F' ' '{print $1}'` kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5ls/testh5ls.sh.in-201- if [ "$INODE_SDIR" != "$INODE_DDIR" ]; then ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5ls/testh5ls.sh.in-225- expect="$TESTDIR/$1" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5ls/testh5ls.sh.in:226: actual="$TESTDIR/`basename $1 .ls`.out" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5ls/testh5ls.sh.in:227: actual_err="$TESTDIR/`basename $1 .ls`.err" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5ls/testh5ls.sh.in-228- actual_sav=${actual}-sav ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5ls/testh5ls.sh.in-251- echo "*FAILED*" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5ls/testh5ls.sh.in:252: nerrors="`expr $nerrors + 1`" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5ls/testh5ls.sh.in-253- if [ yes = "$verbose" ]; then ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5ls/testh5ls.sh.in-268- echo " Expected result differs from actual result" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5ls/testh5ls.sh.in:269: nerrors="`expr $nerrors + 1`" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5ls/testh5ls.sh.in-270- test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /' ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dumppbits.sh.in-171- # make cp fail kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dumppbits.sh.in:172: SDIR=`$DIRNAME $tstfile` kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dumppbits.sh.in:173: INODE_SDIR=`$LS -i -d $SDIR | $AWK -F' ' '{print $1}'` kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dumppbits.sh.in:174: INODE_DDIR=`$LS -i -d $TESTDIR | $AWK -F' ' '{print $1}'` kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dumppbits.sh.in-175- if [ "$INODE_SDIR" != "$INODE_DDIR" ]; then ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dumppbits.sh.in-192- # make cp fail kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dumppbits.sh.in:193: SDIR=`$DIRNAME $tstfile` kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dumppbits.sh.in:194: INODE_SDIR=`$LS -i -d $SDIR | $AWK -F' ' '{print $1}'` kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dumppbits.sh.in:195: INODE_DDIR=`$LS -i -d $TESTDIR | $AWK -F' ' '{print $1}'` kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dumppbits.sh.in-196- if [ "$INODE_SDIR" != "$INODE_DDIR" ]; then ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dumppbits.sh.in-221- expect="$TESTDIR/$1" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dumppbits.sh.in:222: actual="$TESTDIR/`basename $1 .ddl`.out" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dumppbits.sh.in:223: actual_err="$TESTDIR/`basename $1 .ddl`.err" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dumppbits.sh.in-224- actual_sav=${actual}-sav ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dumppbits.sh.in-250- echo " Expected result (*.ddl) differs from actual result (*.out)" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dumppbits.sh.in:251: nerrors="`expr $nerrors + 1`" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dumppbits.sh.in-252- test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /' ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dumppbits.sh.in-268- expectdata="$TESTDIR/$1" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dumppbits.sh.in:269: expect="$TESTDIR/`basename $1 .exp`.ddl" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dumppbits.sh.in:270: actualdata="$TESTDIR/`basename $1 .exp`.txt" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dumppbits.sh.in:271: actual="$TESTDIR/`basename $1 .exp`.out" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dumppbits.sh.in:272: actual_err="$TESTDIR/`basename $1 .exp`.err" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dumppbits.sh.in-273- shift ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dumppbits.sh.in-296- echo " Expected datafile (*.exp) differs from actual datafile (*.txt)" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dumppbits.sh.in:297: nerrors="`expr $nerrors + 1`" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dumppbits.sh.in-298- test yes = "$verbose" && $DIFF $expectdata $actualdata |sed 's/^/ /' ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dumppbits.sh.in-302- echo " Expected result (*.ddl) differs from actual result (*.out)" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dumppbits.sh.in:303: nerrors="`expr $nerrors + 1`" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dumppbits.sh.in-304- test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /' ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dumppbits.sh.in-318- expect="$TESTDIR/$1" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dumppbits.sh.in:319: actual="$TESTDIR/`basename $1 .ddl`.out" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dumppbits.sh.in:320: actual_err="$TESTDIR/`basename $1 .ddl`.err" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dumppbits.sh.in:321: actual_ext="$TESTDIR/`basename $1 .ddl`.ext" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dumppbits.sh.in-322- actual_sav=${actual}-sav ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dumppbits.sh.in-357- echo " Expected result (*.ddl) differs from actual result (*.out)" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dumppbits.sh.in:358: nerrors="`expr $nerrors + 1`" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dumppbits.sh.in-359- test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /' ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dumppbits.sh.in-373- expect="$TESTDIR/$1" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dumppbits.sh.in:374: expect_err="$TESTDIR/`basename $1 .ddl`.err" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dumppbits.sh.in:375: actual="$TESTDIR/`basename $1 .ddl`.out" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dumppbits.sh.in:376: actual_err="$TESTDIR/`basename $1 .ddl`.oerr" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dumppbits.sh.in:377: actual_ext="$TESTDIR/`basename $1 .ddl`.ext" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dumppbits.sh.in-378- actual_sav=${actual}-sav ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dumppbits.sh.in-414- echo " Expected result (*.err) differs from actual result (*.oerr)" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dumppbits.sh.in:415: nerrors="`expr $nerrors + 1`" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dumppbits.sh.in-416- test yes = "$verbose" && $DIFF $expect_err $actual_ext |sed 's/^/ /' ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dumppbits.sh.in-420- echo " Expected result (*.ddl) differs from actual result (*.out)" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dumppbits.sh.in:421: nerrors="`expr $nerrors + 1`" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dumppbits.sh.in-422- test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /' ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dumppbits.sh.in-457- echo "*FAILED*" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dumppbits.sh.in:458: nerrors="`expr $nerrors + 1`" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dumppbits.sh.in-459- else ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dumppbits.sh.in-490- echo "*FAILED*" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dumppbits.sh.in:491: nerrors="`expr $nerrors + 1`" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dumppbits.sh.in-492- else ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dumpxml.sh.in-202- # make cp fail kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dumpxml.sh.in:203: SDIR=`$DIRNAME $tstfile` kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dumpxml.sh.in:204: INODE_SDIR=`$LS -i -d $SDIR | $AWK -F' ' '{print $1}'` kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dumpxml.sh.in:205: INODE_DDIR=`$LS -i -d $TESTDIR | $AWK -F' ' '{print $1}'` kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dumpxml.sh.in-206- if [ "$INODE_SDIR" != "$INODE_DDIR" ]; then ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dumpxml.sh.in-223- # make cp fail kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dumpxml.sh.in:224: SDIR=`$DIRNAME $tstfile` kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dumpxml.sh.in:225: INODE_SDIR=`$LS -i -d $SDIR | $AWK -F' ' '{print $1}'` kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dumpxml.sh.in:226: INODE_DDIR=`$LS -i -d $TESTDIR | $AWK -F' ' '{print $1}'` kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dumpxml.sh.in-227- if [ "$INODE_SDIR" != "$INODE_DDIR" ]; then ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dumpxml.sh.in-252- expect="$TESTDIR/$1" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dumpxml.sh.in:253: actual="$TESTDIR/`basename $1 .xml`.out" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dumpxml.sh.in:254: actual_err="$TESTDIR/`basename $1 .xml`.err" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dumpxml.sh.in-255- shift ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dumpxml.sh.in-273- echo " Expected result (*.xml) differs from actual result (*.out)" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dumpxml.sh.in:274: nerrors="`expr $nerrors + 1`" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dumpxml.sh.in-275- test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /' ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in-402- # make cp fail kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in:403: SDIR=`$DIRNAME $tstfile` kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in:404: INODE_SDIR=`$LS -i -d $SDIR | $AWK -F' ' '{print $1}'` kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in:405: INODE_DDIR=`$LS -i -d $TESTDIR | $AWK -F' ' '{print $1}'` kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in-406- if [ "$INODE_SDIR" != "$INODE_DDIR" ]; then ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in-423- # make cp fail kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in:424: SDIR=`$DIRNAME $tstfile` kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in:425: INODE_SDIR=`$LS -i -d $SDIR | $AWK -F' ' '{print $1}'` kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in:426: INODE_DDIR=`$LS -i -d $TESTDIR | $AWK -F' ' '{print $1}'` kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in-427- if [ "$INODE_SDIR" != "$INODE_DDIR" ]; then ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in-465- expect="$TESTDIR/$1" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in:466: actual="$TESTDIR/`basename $1 .ddl`.out" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in:467: actual_err="$TESTDIR/`basename $1 .ddl`.err" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in-468- actual_sav=${actual}-sav ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in-494- echo " Expected result (*.ddl) differs from actual result (*.out)" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in:495: nerrors="`expr $nerrors + 1`" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in-496- test yes = "$verbose" && $DIFF $caseless $expect $actual |sed 's/^/ /' ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in-513- expectdata="$TESTDIR/$1" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in:514: expect="$TESTDIR/`basename $1 .exp`.ddl" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in:515: actualdata="$TESTDIR/`basename $1 .exp`.txt" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in:516: actual="$TESTDIR/`basename $1 .exp`.out" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in:517: actual_err="$TESTDIR/`basename $1 .exp`.err" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in-518- shift ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in-541- echo " Expected datafile (*.exp) differs from actual datafile (*.txt)" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in:542: nerrors="`expr $nerrors + 1`" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in-543- test yes = "$verbose" && $DIFF $expectdata $actualdata |sed 's/^/ /' ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in-547- echo " Expected result (*.ddl) differs from actual result (*.out)" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in:548: nerrors="`expr $nerrors + 1`" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in-549- test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /' ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in-565- expectdata="$TESTDIR/$1" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in:566: expect="$TESTDIR/`basename $1 .exp`.ddl" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in:567: actualdata="$TESTDIR/`basename $1 .exp`.txt" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in:568: actual="$TESTDIR/`basename $1 .exp`.out" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in:569: actual_err="$TESTDIR/`basename $1 .exp`.err" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in-570- shift kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in-571- expectmeta="$TESTDIR/$1" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in:572: actualmeta="$TESTDIR/`basename $1 .exp`.txt" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in-573- shift ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in-601- echo " Expected metafile (*.ddl) differs from actual metafile (*.txt)" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in:602: nerrors="`expr $nerrors + 1`" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in-603- test yes = "$verbose" && $DIFF $expectmeta $actualmeta |sed 's/^/ /' ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in-607- echo " Expected datafile (*.exp) differs from actual datafile (*.txt)" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in:608: nerrors="`expr $nerrors + 1`" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in-609- test yes = "$verbose" && $DIFF $expectdata $actualdata |sed 's/^/ /' ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in-613- echo " Expected result (*.ddl) differs from actual result (*.out)" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in:614: nerrors="`expr $nerrors + 1`" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in-615- test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /' ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in-630- expectdata="$TESTDIR/$1" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in:631: actualdata="$TESTDIR/`basename $1 .exp`.txt" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in:632: actual="$TESTDIR/`basename $1 .exp`.out" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in:633: actual_err="$TESTDIR/`basename $1 .exp`.err" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in-634- shift ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in-652- echo " Expected datafile (*.exp) differs from actual datafile (*.txt)" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in:653: nerrors="`expr $nerrors + 1`" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in-654- test yes = "$verbose" && $DIFF $expectdata $actualdata |sed 's/^/ /' ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in-668- expect="$TESTDIR/$1" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in:669: actual="$TESTDIR/`basename $1 .ddl`.out" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in:670: actual_err="$TESTDIR/`basename $1 .ddl`.err" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in:671: actual_ext="$TESTDIR/`basename $1 .ddl`.ext" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in-672- actual_sav=${actual}-sav ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in-707- echo " Expected result (*.ddl) differs from actual result (*.out)" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in:708: nerrors="`expr $nerrors + 1`" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in-709- test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /' ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in-724- expect="$TESTDIR/$1" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in:725: expect_err="$TESTDIR/`basename $1 .ddl`.err" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in:726: actual="$TESTDIR/`basename $1 .ddl`.out" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in:727: actual_err="$TESTDIR/`basename $1 .ddl`.oerr" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in:728: actual_ext="$TESTDIR/`basename $1 .ddl`.ext" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in-729- actual_sav=${actual}-sav ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in-765- echo " Expected result (*.err) differs from actual result (*.oerr)" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in:766: nerrors="`expr $nerrors + 1`" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in-767- test yes = "$verbose" && $DIFF $expect_err $actual_ext |sed 's/^/ /' ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in-771- echo " Expected result (*.ddl) differs from actual result (*.out)" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in:772: nerrors="`expr $nerrors + 1`" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in-773- test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /' ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in-788- expect="$TESTDIR/$1" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in:789: expect_err="$TESTDIR/`basename $1 .ddl`.err" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in:790: actual="$TESTDIR/`basename $1 .ddl`.out" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in:791: actual_err="$TESTDIR/`basename $1 .ddl`.oerr" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in:792: actual_ext="$TESTDIR/`basename $1 .ddl`.ext" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in-793- actual_sav=${actual}-sav ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in-829- echo " Expected result (*.err) differs from actual result (*.oerr)" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in:830: nerrors="`expr $nerrors + 1`" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in-831- test yes = "$verbose" && $DIFF $expect_err $actual_ext |sed 's/^/ /' ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in-835- echo " Expected result (*.ddl) differs from actual result (*.out)" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in:836: nerrors="`expr $nerrors + 1`" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in-837- test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /' ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in-849- expect="$TESTDIR/$1" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in:850: actual="$TESTDIR/`basename $1 .txt`.out" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in:851: actual_err="$TESTDIR/`basename $1 .txt`.err" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in-852- shift ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in-870- echo " Expected output (*.txt) differs from actual output (*.out)" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in:871: nerrors="`expr $nerrors + 1`" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in-872- fi ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in-906- echo "*FAILED*" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in:907: nerrors="`expr $nerrors + 1`" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in-908- else ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in-939- echo "*FAILED*" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in:940: nerrors="`expr $nerrors + 1`" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/tools/h5dump/testh5dump.sh.in-941- else ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/pgi-fflags-28-if test X = "X$f9x_flags_set"; then kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/pgi-fflags:29: f9x_version="`$FC $FCFLAGS -V 2>&1 |grep '^pgf90 '`" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/pgi-fflags-30- if test X != "X$f9x_version"; then kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/pgi-fflags:31: is_mpi="`$FC $FCFLAGS -help 2>&1 |grep 'link MPI'`" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/pgi-fflags:32: f9x_vendor=`echo $f9x_version |sed 's/\([a-z0-9]*\).*/\1/'` kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/pgi-fflags:33: f9x_version=`echo $f9x_version |sed 's/pgf90 \([-a-z0-9\.\-]*\).*/\1/'` kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/pgi-fflags-34- echo "compiler '$FC' is PGI $f9x_vendor-$f9x_version" ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/pgi-fflags-37- # PGI version numbers are of the form: "major.minor-patch" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/pgi-fflags:38: f9x_vers_major=`echo $f9x_version | cut -f1 -d.` kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/pgi-fflags:39: f9x_vers_minor=`echo $f9x_version | cut -f2 -d. | cut -f1 -d-` kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/pgi-fflags:40: f9x_vers_patch=`echo $f9x_version | cut -f2 -d. | cut -f2 -d-` kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/pgi-fflags-41- test -n "$f9x_vers_major" || f9x_vers_major=0 ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/pgi-fflags-43- test -n "$f9x_vers_patch" || f9x_vers_patch=0 kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/pgi-fflags:44: f9x_vers_all=`expr $f9x_vers_major '*' 1000000 + $f9x_vers_minor '*' 1000 + $f9x_vers_patch` kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/pgi-fflags-45- fi ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/intel-flags-28-if test X = "X$cc_flags_set"; then kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/intel-flags:29: cc_version="`$CC $CFLAGS $H5_CFLAGS -V 2>&1 |grep 'Version'`" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/intel-flags-30- if test X != "X$cc_version"; then kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/intel-flags-31- cc_vendor=icc kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/intel-flags:32: cc_version=`echo $cc_version |sed 's/.*Version \([-a-z0-9\.\-]*\).*/\1/'` kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/intel-flags-33- echo "compiler '$CC' is Intel $cc_vendor-$cc_version" ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/intel-flags-36- # Intel version numbers are of the form: "major.minor" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/intel-flags:37: cc_vers_major=`echo $cc_version | cut -f1 -d.` kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/intel-flags:38: cc_vers_minor=`echo $cc_version | cut -f2 -d.` kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/intel-flags:39: #cc_vers_patch=`echo $cc_version | cut -f2 -d.` kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/intel-flags-40- test -n "$cc_vers_major" || cc_vers_major=0 ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/intel-flags-42- test -n "$cc_vers_patch" || cc_vers_patch=0 kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/intel-flags:43: cc_vers_all=`expr $cc_vers_major '*' 1000000 + $cc_vers_minor '*' 1000 + $cc_vers_patch` kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/intel-flags-44- fi ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/gnu-flags-38- grep 'gcc version' | sed 's/.*gcc version \([-a-z0-9\.]*\).*/\1/'`" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/gnu-flags:39: cc_vendor=`echo $cc_version |sed 's/\([a-z]*\).*/\1/'` kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/gnu-flags:40: cc_version=`echo $cc_version |sed 's/[-a-z]//g'` kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/gnu-flags-41- if test X = "X$cc_vendor" -a X != "X$cc_version"; then ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/gnu-flags-48- # Some version numbers kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/gnu-flags:49: cc_vers_major=`echo $cc_version | cut -f1 -d.` kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/gnu-flags:50: cc_vers_minor=`echo $cc_version | cut -f2 -d.` kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/gnu-flags:51: cc_vers_patch=`echo $cc_version | cut -f3 -d.` kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/gnu-flags-52- test -n "$cc_vers_major" || cc_vers_major=0 ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/gnu-flags-54- test -n "$cc_vers_patch" || cc_vers_patch=0 kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/gnu-flags:55: cc_vers_all=`expr $cc_vers_major '*' 1000000 + $cc_vers_minor '*' 1000 + $cc_vers_patch` kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/gnu-flags-56-fi ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/gnu-flags-178- # Replace old -W flag with new -Wextra flag kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/gnu-flags:179: H5_CFLAGS="`echo $H5_CFLAGS | sed -e 's/-W\ /-Wextra\ /g'`" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/gnu-flags-180- ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/gnu-flags-251- # Replace old -W flag with new -Wextra flag kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/gnu-flags:252: H5_CFLAGS="`echo $H5_CFLAGS | sed -e 's/-W\ /-Wextra\ /g'`" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/gnu-flags-253- ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/gnu-flags-319- # Replace old -W flag with new -Wextra flag kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/gnu-flags:320: H5_CFLAGS="`echo $H5_CFLAGS | sed -e 's/-W\ /-Wextra\ /g'`" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/gnu-flags-321- ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/gnu-flags-385- # Replace old -W flag with new -Wextra flag kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/gnu-flags:386: H5_CFLAGS="`echo $H5_CFLAGS | sed -e 's/-W\ /-Wextra\ /g'`" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/gnu-flags-387- ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/gnu-flags-444- # Replace old -W flag with new -Wextra flag kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/gnu-flags:445: H5_CFLAGS="`echo $H5_CFLAGS | sed -e 's/-W\ /-Wextra\ /g'`" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/gnu-flags-446- ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/gnu-flags-500- # Replace old -W flag with new -Wextra flag kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/gnu-flags:501: H5_CFLAGS="`echo $H5_CFLAGS | sed -e 's/-W\ /-Wextra\ /g'`" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/gnu-flags-502- ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/gnu-flags-552- # Replace old -W flag with new -Wextra flag kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/gnu-flags:553: H5_CFLAGS="`echo $H5_CFLAGS | sed -e 's/-W\ /-Wextra\ /g'`" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/gnu-flags-554- ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/gnu-flags-601- # Replace old -W flag with new -Wextra flag kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/gnu-flags:602: H5_CFLAGS="`echo $H5_CFLAGS | sed -e 's/-W\ /-Wextra\ /g'`" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/gnu-flags-603- ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/gnu-flags-647- # Replace old -W flag with new -Wextra flag kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/gnu-flags:648: H5_CFLAGS="`echo $H5_CFLAGS | sed -e 's/-W\ /-Wextra\ /g'`" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/gnu-flags-649- ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/gnu-flags-687- # Replace old -W flag with new -Wextra flag kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/gnu-flags:688: H5_CFLAGS="`echo $H5_CFLAGS | sed -e 's/-W\ /-Wextra\ /g'`" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/gnu-flags-689- ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/gnu-flags-724- # Replace old -W flag with new -Wextra flag kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/gnu-flags:725: H5_CFLAGS="`echo $H5_CFLAGS | sed -e 's/-W\ /-Wextra\ /g'`" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/gnu-flags-726- ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/gnu-flags-758- # Replace old -W flag with new -Wextra flag kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/gnu-flags:759: H5_CFLAGS="`echo $H5_CFLAGS | sed -e 's/-W\ /-Wextra\ /g'`" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/gnu-flags-760- ;; ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/cce-fflags-27-if test X = "X$f9x_flags_set"; then kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/cce-fflags:28: f9x_version="`$FC $FCFLAGS $H5_FCFLAGS -V 2>&1 |grep 'Cray'`" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/cce-fflags-29- if test X != "X$f9x_version"; then kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/cce-fflags-30- f9x_vendor=cce kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/cce-fflags:31: f9x_version=`echo $f9x_version |sed 's/.*Version \([-a-z0-9\.\-]*\).*/\1/'` kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/cce-fflags-32- echo "compiler '$FC' is Cray $f9x_vendor-$f9x_version" ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/solaris-57- ($CC -V 2>&1) | grep -s 'cc: .* C 4\.' >/dev/null 2>&1 \ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/solaris:58: && PROD_CFLAGS="`echo $PROD_CFLAGS | sed -e 's/-O//'`" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/solaris-59-fi ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/solaris-94- kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/solaris:95:cxx_vers_major=`echo $cxx_version | cut -f1 -d.` kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/solaris:96:cxx_vers_minor=`echo $cxx_version | cut -f2 -d.` kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/solaris:97:cxx_vers_patch=`echo $cxx_version | cut -f3 -d.` kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/solaris-98- ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/conclude.am-102- @if test -n "$(TEST_PROG)$(TEST_SCRIPT)"; then \ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/conclude.am:103: echo "===Serial tests in `echo ${PWD} | sed -e s:.*/::` begin `date`==="; \ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/conclude.am-104- fi ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/conclude.am-106- @if test -n "$(TEST_PROG)$(TEST_SCRIPT)"; then \ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/conclude.am:107: echo "===Serial tests in `echo ${PWD} | sed -e s:.*/::` ended `date`===";\ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/conclude.am-108- fi ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/conclude.am-160- cmd=$(@:.chkexe_=);\ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/conclude.am:161: tname=`basename $$cmd`;\ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/conclude.am:162: chkname=`basename $(@:.chkexe_=.chkexe)`;\ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/conclude.am:163: log=`basename $(@:.chkexe_=.chklog)`; \ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/conclude.am-164- echo "============================"; \ ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/conclude.am-197- @if test -n "$(TEST_PROG_PARA)$(TEST_SCRIPT_PARA)"; then \ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/conclude.am:198: echo "===Parallel tests in `echo ${PWD} | sed -e s:.*/::` begin `date`==="; \ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/conclude.am-199- fi ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/conclude.am-221- @if test -n "$(TEST_PROG_PARA)$(TEST_SCRIPT_PARA)"; then \ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/conclude.am:222: echo "===Parallel tests in `echo ${PWD} | sed -e s:.*/::` ended `date`===";\ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/conclude.am-223- fi ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/intel-fflags-28-if test X = "X$f9x_flags_set"; then kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/intel-fflags:29: f9x_version="`$FC $FCFLAGS $H5_FCFLAGS -V 2>&1 |grep '^Intel'`" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/intel-fflags-30- if test X != "X$f9x_version"; then kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/intel-fflags-31- f9x_vendor=ifort kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/intel-fflags:32: f9x_version="`echo $f9x_version |sed 's/.*Version \([-a-z0-9\.\-]*\).*/\1/'`" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/intel-fflags-33- echo "compiler '$FC' is Intel $f9x_vendor-$f9x_version" ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/intel-fflags-36- # Intel version numbers are of the form: "major.minor" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/intel-fflags:37: f9x_vers_major=`echo $f9x_version | cut -f1 -d.` kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/intel-fflags:38: f9x_vers_minor=`echo $f9x_version | cut -f2 -d.` kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/intel-fflags:39: #f9x_vers_patch=`echo $f9x_version | cut -f2 -d.` kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/intel-fflags-40- test -n "$f9x_vers_major" || f9x_vers_major=0 ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/intel-fflags-42- test -n "$f9x_vers_patch" || f9x_vers_patch=0 kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/intel-fflags:43: f9x_vers_all=`expr $f9x_vers_major '*' 1000000 + $f9x_vers_minor '*' 1000 + $f9x_vers_patch` kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/intel-fflags-44- fi ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/pgi-flags-28-if test X = "X$cc_flags_set"; then kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/pgi-flags:29: cc_version="`$CC $CFLAGS -V 2>&1 |grep '^pgcc '`" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/pgi-flags-30- if test X != "X$cc_version"; then kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/pgi-flags:31: is_mpi="`$CC $CFLAGS -help 2>&1 |grep 'MPI'`" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/pgi-flags:32: cc_vendor=`echo $cc_version |sed 's/\([a-z]*\).*/\1/'` kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/pgi-flags:33: cc_version=`echo $cc_version |sed 's/pgcc \([-a-z0-9\.\-]*\).*/\1/'` kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/pgi-flags-34- echo "compiler '$CC' is PGI $cc_vendor-$cc_version" ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/pgi-flags-37- # PGI version numbers are of the form: "major.minor-patch" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/pgi-flags:38: cc_vers_major=`echo $cc_version | cut -f1 -d.` kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/pgi-flags:39: cc_vers_minor=`echo $cc_version | cut -f2 -d. | cut -f1 -d-` kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/pgi-flags:40: cc_vers_patch=`echo $cc_version | cut -f2 -d. | cut -f2 -d-` kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/pgi-flags-41- test -n "$cc_vers_major" || cc_vers_major=0 ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/pgi-flags-43- test -n "$cc_vers_patch" || cc_vers_patch=0 kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/pgi-flags:44: cc_vers_all=`expr $cc_vers_major '*' 1000000 + $cc_vers_minor '*' 1000 + $cc_vers_patch` kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/pgi-flags-45- fi ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/cce-flags-27-if test X = "X$cc_flags_set"; then kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/cce-flags:28: cc_version="`$CC $CFLAGS $H5_CFLAGS -V 2>&1 |grep 'Cray'`" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/cce-flags-29- if test X != "X$cc_version"; then kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/cce-flags-30- cc_vendor=cce kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/cce-flags:31: cc_version=`echo $cc_version |sed 's/.*Version \([-a-z0-9\.\-]*\).*/\1/'` kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/cce-flags-32- echo "compiler '$CC' is Cray $cc_vendor-$cc_version" ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/apple-62- #echo PROD_CFLAGS=$PROD_CFLAGS kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/apple:63: PROD_CFLAGS="`echo $PROD_CFLAGS | sed -e 's/-O[0-3]*//'`" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/apple-64- #echo new PROD_CFLAGS=$PROD_CFLAGS ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/cmake_ext_mod/NSIS.template.in-352- Push "$0;" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/cmake_ext_mod/NSIS.template.in:353: Call un.StrStr ; Find `$0;` in $1 kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/cmake_ext_mod/NSIS.template.in-354- Pop $2 ; pos of our dir ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/cmake_ext_mod/ConfigureChecks.cmake-3-#----------------------------------------------------------------------------- kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/cmake_ext_mod/ConfigureChecks.cmake:4:include (${CMAKE_ROOT}/Modules/CheckFunctionExists.cmake) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/cmake_ext_mod/ConfigureChecks.cmake:5:include (${CMAKE_ROOT}/Modules/CheckIncludeFile.cmake) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/cmake_ext_mod/ConfigureChecks.cmake:6:include (${CMAKE_ROOT}/Modules/CheckIncludeFileCXX.cmake) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/cmake_ext_mod/ConfigureChecks.cmake:7:include (${CMAKE_ROOT}/Modules/CheckIncludeFiles.cmake) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/cmake_ext_mod/ConfigureChecks.cmake:8:include (${CMAKE_ROOT}/Modules/CheckLibraryExists.cmake) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/cmake_ext_mod/ConfigureChecks.cmake:9:include (${CMAKE_ROOT}/Modules/CheckSymbolExists.cmake) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/cmake_ext_mod/ConfigureChecks.cmake:10:include (${CMAKE_ROOT}/Modules/CheckTypeSize.cmake) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/cmake_ext_mod/ConfigureChecks.cmake:11:include (${CMAKE_ROOT}/Modules/CheckVariableExists.cmake) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/cmake_ext_mod/ConfigureChecks.cmake:12:include (${CMAKE_ROOT}/Modules/CheckFortranFunctionExists.cmake) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/cmake_ext_mod/ConfigureChecks.cmake:13:include (${CMAKE_ROOT}/Modules/TestBigEndian.cmake) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/cmake_ext_mod/ConfigureChecks.cmake-14-if(CMAKE_CXX_COMPILER) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/cmake_ext_mod/ConfigureChecks.cmake:15: include (${CMAKE_ROOT}/Modules/TestForSTDNamespace.cmake) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/cmake_ext_mod/ConfigureChecks.cmake-16-endif(CMAKE_CXX_COMPILER) ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/cmake_ext_mod/HDFLibMacros.cmake-56- kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/cmake_ext_mod/HDFLibMacros.cmake:57:##include (${BINARY_DIR}/${JPEG_PACKAGE_NAME}${HDF_PACKAGE_EXT}-targets.cmake) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/cmake_ext_mod/HDFLibMacros.cmake-58-# Create imported target jpeg-static ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/cmake_ext_mod/HDFLibMacros.cmake-146- kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/cmake_ext_mod/HDFLibMacros.cmake:147:##include (${BINARY_DIR}/${SZIP_PACKAGE_NAME}${HDF_PACKAGE_EXT}-targets.cmake) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/cmake_ext_mod/HDFLibMacros.cmake-148-# Create imported target szip-static ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/cmake_ext_mod/HDFLibMacros.cmake-238- endif (WIN32) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/cmake_ext_mod/HDFLibMacros.cmake:239:##include (${BINARY_DIR}/${ZLIB_PACKAGE_NAME}${HDF_PACKAGE_EXT}-targets.cmake) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/cmake_ext_mod/HDFLibMacros.cmake-240-# Create imported target zlib-static ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/cmake_ext_mod/FindMPI.cmake-93-# include this to handle the QUIETLY and REQUIRED arguments kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/cmake_ext_mod/FindMPI.cmake:94:include(${CMAKE_ROOT}/Modules/FindPackageHandleStandardArgs.cmake) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/cmake_ext_mod/FindMPI.cmake-95-include(GetPrerequisites) ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/linux-gnulibc1-86- $RM $tmpfile kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/linux-gnulibc1:87: fc_version_info=`$FC -V | grep Absoft` kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/linux-gnulibc1-88- ;; ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/linux-gnulibc1-140- *pgcc*) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/linux-gnulibc1:141: cc_version_info=`$CC $CFLAGS $H5_CFLAGS -V 2>&1 | grep 'pgcc'` kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/linux-gnulibc1-142- ;; ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/linux-gnulibc1-153- sed 's/^\([a-z]* \)/ built with \1/1'` kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/linux-gnulibc1:154: cc_version_info=`echo $cc_version_info` kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/linux-gnulibc1-155- ;; ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/linux-gnulibc1-182- sed 's/^\([a-z]* \)/ built with \1/1'` kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/linux-gnulibc1:183: fc_version_info=`echo $fc_version_info` kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/linux-gnulibc1-184- ;; ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/linux-gnulibc1-201- $RM $tmpfile kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/linux-gnulibc1:202: fc_version_info=`$FC -V | grep Absoft` kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/linux-gnulibc1-203- ;; ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/linux-gnulibc1-210- *pgf90*) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/linux-gnulibc1:211: fc_version_info=`$FC $FCFLAGS $H5_FCFLAGS -V 2>&1 | grep 'pgf90'` kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/linux-gnulibc1-212- ;; ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/linux-gnulibc1-232- *pgCC*) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/linux-gnulibc1:233: cxx_version_info=`$CXX $CXXFLAGS $H5_CXXFLAGS -V 2>&1 | grep 'pgCC'` kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/linux-gnulibc1-234- ;; ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/linux-gnulibc1-239- sed 's/^\([a-z]* \)/ built with \1/1'` kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/linux-gnulibc1:240: cxx_version_info=`echo $cxx_version_info` kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/linux-gnulibc1-241- ;; ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/ibm-flags-30- # Verify this is an IBM XL compiler kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/ibm-flags:31: cc_version="`$CC $CFLAGS -qversion 2>&1 | grep 'IBM XL C/C++'`" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/ibm-flags-32- if test X != "X$cc_version"; then kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/ibm-flags-33- cc_vendor="XL" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/ibm-flags:34: cc_version="`$CC $CFLAGS -qversion 2>&1 | sed -n 's/Version: \([0-9\.]*\).*/\1/p'`" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/ibm-flags-35- cc_version_info="IBM XL C/C++ $cc_version" ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/ibm-flags-40- # (Need to find out the official meaning of the 4 components.) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/ibm-flags:41: cc_vers_major=`echo $cc_version | cut -f1 -d.` kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/ibm-flags:42: cc_vers_minor=`echo $cc_version | cut -f2 -d.` kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/ibm-flags:43: cc_vers_patch=`echo $cc_version | cut -f3 -d.` kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/ibm-flags-44- test -n "$cc_vers_major" || cc_vers_major=0 ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/ibm-flags-46- test -n "$cc_vers_patch" || cc_vers_patch=0 kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/ibm-flags:47: cc_vers_all=`expr \( \( $cc_vers_major \* 100 + $cc_vers_minor \) \* 100 \) + $cc_vers_patch` kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/ibm-flags-48- fi ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/ibm-flags-85- # Verify this is an IBM XL compiler kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/ibm-flags:86: fc_version="`$FC $FCFLAGS -qversion 2>&1 | grep 'IBM XL Fortran'`" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/ibm-flags-87- if test X != "X$fc_version"; then kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/ibm-flags-88- fc_vendor="XL" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/ibm-flags:89: fc_version="`$FC $FCFLAGS -qversion 2>&1 | sed -n 's/Version: \([0-9\.]*\).*/\1/p'`" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/ibm-flags-90- fc_version_info="IBM XL Fortran $fc_version" ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/ibm-flags-99- # Verify this is an IBM XL compiler kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/ibm-flags:100: cxx_version="`$CXX $CXXFLAGS -qversion 2>&1 | grep 'IBM XL C/C++'`" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/ibm-flags-101- if test X != "X$cxx_version"; then kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/ibm-flags-102- cxx_vendor="XL" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/ibm-flags:103: cxx_version="`$CXX $CXXFLAGS -qversion 2>&1 | sed -n 's/Version: \([0-9\.]*\).*/\1/p'`" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/ibm-flags-104- cxx_version_info="IBM XL C/C++ $cxx_version" ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/cmake/ConfigureChecks.cmake-4-set (HDF_PREFIX "H5") kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/cmake/ConfigureChecks.cmake:5:include (${HDF_RESOURCES_EXT_DIR}/ConfigureChecks.cmake) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/cmake/ConfigureChecks.cmake-6- ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/cmake/userblockTest.cmake-36- # find the length of the user block to check kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/cmake/userblockTest.cmake:37: #s1=`cat $ufile | wc -c | sed -e 's/ //g'` kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/cmake/userblockTest.cmake-38- file (STRINGS ${TEST_FOLDER}/${TEST_UFILE} TEST_U_STRING) ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/cmake/userblockTest.cmake-44- # of the user block kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/cmake/userblockTest.cmake:45: #s2=`$JAM_BIN/tellub $origfile` kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/cmake/userblockTest.cmake-46- EXECUTE_PROCESS ( ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/cmake/userblockTest.cmake-104- # call 'ubsize' to get the size of the user block kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/cmake/userblockTest.cmake:105: #ubsize=`$JAM_BIN/tellub $hfile` kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/cmake/userblockTest.cmake-106- EXECUTE_PROCESS ( ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/cmake/scripts/HDF518config.cmake-226-if(WIN32) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/cmake/scripts/HDF518config.cmake:227: include(${CTEST_SCRIPT_DIRECTORY}\\CTestScript.cmake) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/cmake/scripts/HDF518config.cmake-228- if(EXISTS "${CTEST_BINARY_DIRECTORY}\\HDF5-${CTEST_SOURCE_VERSION}${CTEST_SOURCE_VERSEXT}-win${SITE_OS_BITS}.exe") ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/cmake/scripts/HDF518config.cmake-237-else() kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/cmake/scripts/HDF518config.cmake:238: include(${CTEST_SCRIPT_DIRECTORY}/CTestScript.cmake) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/cmake/scripts/HDF518config.cmake-239- if(APPLE) ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/gnu-fflags-31- if test X != "X$f9x_version"; then kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/gnu-fflags:32:# is_mpi="`$FC $FCFLAGS $H5_FCFLAGS -help 2>&1 |grep 'link MPI'`" kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/gnu-fflags:33: f9x_vendor=`echo $f9x_version |sed 's/\([a-z]*\).*/\1/'` kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/gnu-fflags:34: f9x_version=`echo $f9x_version |sed 's/[-a-z]//g'` kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/gnu-fflags-35- if test X = "X$f9x_vendor" -a X != "X$f9x_version"; then ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/gnu-fflags-42- # Some version numbers kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/gnu-fflags:43: f9x_vers_major=`echo $f9x_version | cut -f1 -d.` kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/gnu-fflags:44: f9x_vers_minor=`echo $f9x_version | cut -f2 -d.` kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/gnu-fflags:45: f9x_vers_patch=`echo $f9x_version | cut -f3 -d.` kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/gnu-fflags-46- test -n "$f9x_vers_major" || f9x_vers_major=0 ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/gnu-fflags-48- test -n "$f9x_vers_patch" || f9x_vers_patch=0 kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/gnu-fflags:49: f9x_vers_all=`expr $f9x_vers_major '*' 1000000 + $f9x_vers_minor '*' 1000 + $f9x_vers_patch` kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/config/gnu-fflags-50- fi ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5AC.c-4080- while(i < num_entries) { kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5AC.c:4081: haddr_buf_ptr[i] = H5FD_mpi_MPIOff_to_haddr(MPI_Offset_buf_ptr[i]); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5AC.c-4082- ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5AC.c-4198- while(i < num_entries) { kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5AC.c:4199: haddr_buf_ptr[i] = H5FD_mpi_MPIOff_to_haddr(MPI_Offset_buf_ptr[i]); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5AC.c-4200- ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Oprivate.h-107-#ifdef H5O_PACKAGE kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Oprivate.h:108:#define H5O_OH_GET_ADDR(O) ((O)->chunk[0].addr) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Oprivate.h-109-#else /* H5O_PACKAGE */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Oprivate.h:110:#define H5O_OH_GET_ADDR(O) (H5O_get_oh_addr(O)) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Oprivate.h-111-#endif /* H5O_PACKAGE */ ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Oprivate.h-654-H5_DLL void *H5O_obj_create(H5F_t *f, H5O_type_t obj_type, void *crt_info, H5G_loc_t *obj_loc, hid_t dxpl_id); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Oprivate.h:655:H5_DLL haddr_t H5O_get_oh_addr(const H5O_t *oh); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Oprivate.h-656-H5_DLL herr_t H5O_get_rc_and_type(const H5O_loc_t *oloc, hid_t dxpl_id, unsigned *rc, H5O_type_t *otype); ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fpkg.h-91- ( H5F_SUPERBLOCK_VARLEN_SIZE_COMMON /* Common variable-length info */ \ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fpkg.h:92: + H5F_SIZEOF_ADDR(f) /* base address */ \ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fpkg.h:93: + H5F_SIZEOF_ADDR(f) /* <unused> */ \ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fpkg.h:94: + H5F_SIZEOF_ADDR(f) /* EOF address */ \ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fpkg.h:95: + H5F_SIZEOF_ADDR(f) /* driver block address */ \ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fpkg.h-96- + H5G_SIZEOF_ENTRY(f)) /* root group ptr */ ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fpkg.h-100- + 2 /* reserved */ \ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fpkg.h:101: + H5F_SIZEOF_ADDR(f) /* base address */ \ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fpkg.h:102: + H5F_SIZEOF_ADDR(f) /* <unused> */ \ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fpkg.h:103: + H5F_SIZEOF_ADDR(f) /* EOF address */ \ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fpkg.h:104: + H5F_SIZEOF_ADDR(f) /* driver block address */ \ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fpkg.h-105- + H5G_SIZEOF_ENTRY(f)) /* root group ptr */ ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fpkg.h-108- + 1 /* consistency flags */ \ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fpkg.h:109: + H5F_SIZEOF_ADDR(f) /* base address */ \ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fpkg.h:110: + H5F_SIZEOF_ADDR(f) /* superblock extension address */ \ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fpkg.h:111: + H5F_SIZEOF_ADDR(f) /* EOF address */ \ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fpkg.h:112: + H5F_SIZEOF_ADDR(f) /* root group object header address */ \ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fpkg.h-113- + H5F_SIZEOF_CHKSUM) /* superblock checksum (keep this last) */ ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5MFaggr.c-203- /* Generate fragment if aggregator is mis-aligned */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5MFaggr.c:204: if(alignment && aggr->addr > 0 && (aggr_mis_align = (aggr->addr + H5FD_get_base_addr(f->shared->lf)) % alignment)) { kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5MFaggr.c-205- aggr_frag_addr = aggr->addr; ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5MFaggr.c-368- if(f->shared->alignment && size >= f->shared->threshold) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5MFaggr.c:369: HDassert(!((ret_value + H5FD_get_base_addr(f->shared->lf)) % f->shared->alignment)); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5MFaggr.c-370- ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5B2hdr.c-256- hdr->f = f; kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5B2hdr.c:257: hdr->sizeof_addr = H5F_SIZEOF_ADDR(f); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5B2hdr.c-258- hdr->sizeof_size = H5F_SIZEOF_SIZE(f); ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Ocache.c-197- oh->sizeof_size = H5F_SIZEOF_SIZE(udata->common.f); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Ocache.c:198: oh->sizeof_addr = H5F_SIZEOF_ADDR(udata->common.f); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Ocache.c-199- ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fsuper_cache.c-148- /* Get the base address for the file in the VFD */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fsuper_cache.c:149: if(HADDR_UNDEF == (base_addr = H5FD_get_base_addr(lf))) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fsuper_cache.c-150- HGOTO_ERROR(H5E_FILE, H5E_CANTGET, NULL, "failed to get base address for file driver") ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fsuper_cache.c-314- /* Set the base address for the file in the VFD now */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fsuper_cache.c:315: if(H5FD_set_base_addr(lf, sblock->base_addr) < 0) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fsuper_cache.c-316- HGOTO_ERROR(H5E_FILE, H5E_CANTSET, NULL, "failed to set base address for file driver") ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fsuper_cache.c-444- /* Set the base address for the file in the VFD now */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fsuper_cache.c:445: if(H5FD_set_base_addr(lf, sblock->base_addr) < 0) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fsuper_cache.c-446- HGOTO_ERROR(H5E_FILE, H5E_CANTSET, NULL, "failed to set base address for file driver") ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fsuper_cache.c-634- *p++ = (uint8_t)HDF5_SHAREDHEADER_VERSION; /* (hard-wired) */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fsuper_cache.c:635: *p++ = (uint8_t)H5F_SIZEOF_ADDR(f); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fsuper_cache.c-636- *p++ = (uint8_t)H5F_SIZEOF_SIZE(f); ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fsuper_cache.c-702- /* Size of file addresses & offsets, and status flags */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fsuper_cache.c:703: *p++ = (uint8_t)H5F_SIZEOF_ADDR(f); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fsuper_cache.c-704- *p++ = (uint8_t)H5F_SIZEOF_SIZE(f); ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Olinfo.c-299- + (linfo->track_corder ? (size_t)8 : 0) /* Curr. max. creation order value */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Olinfo.c:300: + (size_t)H5F_SIZEOF_ADDR(f) /* Address of fractal heap to store "dense" links */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Olinfo.c:301: + (size_t)H5F_SIZEOF_ADDR(f) /* Address of v2 B-tree for indexing names of links */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Olinfo.c:302: + (linfo->index_corder ? (size_t)H5F_SIZEOF_ADDR(f) : 0); /* Address of v2 B-tree for indexing creation order values of links */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Olinfo.c-303- ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5FDstdio.c-158-/* adding for windows NT filesystem support. */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5FDstdio.c:159:#define MAXADDR (((haddr_t)1<<(8*sizeof(file_offset_t)-1))-1) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5FDstdio.c-160-#define ADDR_OVERFLOW(A) (HADDR_UNDEF==(A) || ((A) & ~(haddr_t)MAXADDR)) ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Tvlen.c-269- */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Tvlen.c:270: dt->shared->size = 4 + H5F_SIZEOF_ADDR(f) + 4; kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Tvlen.c-271- ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Oainfo.c-289- + (ainfo->track_corder ? 2 : 0) /* Curr. max. creation order value */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Oainfo.c:290: + H5F_SIZEOF_ADDR(f) /* Address of fractal heap to store "dense" attributes */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Oainfo.c:291: + H5F_SIZEOF_ADDR(f) /* Address of v2 B-tree for indexing names of attributes */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Oainfo.c:292: + (ainfo->index_corder ? H5F_SIZEOF_ADDR(f) : 0)); /* Address of v2 B-tree for indexing creation order values of attributes */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Oainfo.c-293- ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Olink.c-514- case H5L_TYPE_HARD: kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Olink.c:515: ret_value += H5F_SIZEOF_ADDR(f); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Olink.c-516- break; ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Ocont.c-181- /* Set return value */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Ocont.c:182: ret_value = (size_t)(H5F_SIZEOF_ADDR(f) + /* Continuation header address */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Ocont.c-183- H5F_SIZEOF_SIZE(f)); /* Continuation header length */ ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5FDmpio.c-1100- /* Set the size of the file (from library's perspective) */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5FDmpio.c:1101: file->eof = H5FD_mpi_MPIOff_to_haddr(size); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5FDmpio.c-1102- ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Ocopy.c-450- oh_dst->sizeof_size = H5F_SIZEOF_SIZE(oloc_dst->file); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Ocopy.c:451: oh_dst->sizeof_addr = H5F_SIZEOF_ADDR(oloc_dst->file); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Ocopy.c-452- ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Gdense.c-306- /* Retrieve the heap's address in the file */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Gdense.c:307: if(H5HF_get_heap_addr(fheap, &(linfo->fheap_addr)) < 0) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Gdense.c-308- HGOTO_ERROR(H5E_SYM, H5E_CANTGET, FAIL, "can't get fractal heap address") ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Gdense.c-332- /* Retrieve the v2 B-tree's address in the file */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Gdense.c:333: if(H5B2_get_addr(bt2_name, &(linfo->name_bt2_addr)) < 0) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Gdense.c-334- HGOTO_ERROR(H5E_SYM, H5E_CANTGET, FAIL, "can't get v2 B-tree address for name index") ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Gdense.c-352- /* Retrieve the v2 B-tree's address in the file */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Gdense.c:353: if(H5B2_get_addr(bt2_corder, &(linfo->corder_bt2_addr)) < 0) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Gdense.c-354- HGOTO_ERROR(H5E_SYM, H5E_CANTGET, FAIL, "can't get v2 B-tree address for creation order index") ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HFpkg.h-634-H5_DLL herr_t H5HF_man_iblock_detach(H5HF_indirect_t *iblock, hid_t dxpl_id, unsigned entry); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HFpkg.h:635:H5_DLL herr_t H5HF_man_iblock_entry_addr(H5HF_indirect_t *iblock, unsigned entry, kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HFpkg.h-636- haddr_t *child_addr); ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HGquery.c-87-haddr_t kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HGquery.c:88:H5HG_get_addr(const H5HG_heap_t *heap) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HGquery.c-89-{ ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HGquery.c-95- FUNC_LEAVE_NOAPI(heap->addr) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HGquery.c:96:} /* H5HG_get_addr() */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HGquery.c-97- ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Dint.c-2027- /* Return the absolute dataset offset from the beginning of file. */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Dint.c:2028: ret_value = dset->shared->layout.storage.u.contig.addr + H5F_BASE_ADDR(dset->oloc.file); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Dint.c-2029- break; ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HFdblock.c-649- /* (temp. file space does not need to be freed) */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HFdblock.c:650: if(!H5F_IS_TMP_ADDR(f, dblock_addr)) { kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HFdblock.c-651- /* Release direct block's disk space */ ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HGprivate.h-47-#ifdef H5HG_PACKAGE kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HGprivate.h:48:#define H5HG_ADDR(H) ((H)->addr) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HGprivate.h-49-#define H5HG_SIZE(H) ((H)->size) ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HGprivate.h-51-#else /* H5HG_PACKAGE */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HGprivate.h:52:#define H5HG_ADDR(H) (H5HG_get_addr(H)) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HGprivate.h-53-#define H5HG_SIZE(H) (H5HG_get_size(H)) ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HGprivate.h-68-/* Query routines */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HGprivate.h:69:H5_DLL haddr_t H5HG_get_addr(const H5HG_heap_t *h); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HGprivate.h-70-H5_DLL size_t H5HG_get_size(const H5HG_heap_t *h); ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HFcache.c-1007- /* Check for needing to re-allocate indirect block from 'temp.' to 'normal' file space */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HFcache.c:1008: if(H5F_IS_TMP_ADDR(f, addr)) { kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HFcache.c-1009- /* Sanity check */ ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HFcache.c-1052- /* Indirect block must be in 'normal' file space now */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HFcache.c:1053: HDassert(!H5F_IS_TMP_ADDR(f, addr)); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HFcache.c-1054- ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HFcache.c-1109- /* (temp. file space does not need to be freed) */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HFcache.c:1110: if(!H5F_IS_TMP_ADDR(f, iblock->cache_info.addr)) { kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HFcache.c-1111- /* Release the space on disk */ ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HFcache.c-1400- H5HF_hdr_t *hdr; /* Shared fractal heap information */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HFcache.c:1401: hbool_t at_tmp_addr = H5F_IS_TMP_ADDR(f, addr); /* Flag to indicate direct block is at temporary address */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HFcache.c-1402- void *write_buf; /* Pointer to buffer to write out */ ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HFcache.c-1624- /* Direct block must be in 'normal' file space now */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HFcache.c:1625: HDassert(!H5F_IS_TMP_ADDR(f, addr)); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HFcache.c-1626- ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HFcache.c-1681- /* (temp. file space does not need to be freed) */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HFcache.c:1682: if(!H5F_IS_TMP_ADDR(f, dblock->cache_info.addr)) { kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HFcache.c-1683- /* Release the space on disk */ ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SMbtree2.c-114- /* Determine the size of addresses & lengths in the file */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SMbtree2.c:115: ctx->sizeof_addr = H5F_SIZEOF_ADDR(f); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SMbtree2.c-116- ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SMbtree2.c-248- /* Determine the size of addresses & lengths in the file */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SMbtree2.c:249: ctx->sizeof_addr = H5F_SIZEOF_ADDR(f); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SMbtree2.c-250- ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HFhdr.c-128- hdr->sizeof_size = H5F_SIZEOF_SIZE(f); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HFhdr.c:129: hdr->sizeof_addr = H5F_SIZEOF_ADDR(f); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HFhdr.c-130- ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HFsection.c-2533- /* Get the address of the child indirect block */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HFsection.c:2534: if(H5HF_man_iblock_entry_addr(sect->u.indirect.u.iblock, curr_entry, &child_iblock_addr) < 0) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HFsection.c-2535- HGOTO_ERROR(H5E_HEAP, H5E_CANTGET, FAIL, "unable to retrieve child indirect block's address") ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SMtest.c-91- /* Check for shared messages being enabled */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SMtest.c:92: if(H5F_addr_defined(H5F_SOHM_ADDR(f))) { kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SMtest.c-93- H5SM_index_header_t *header; /* Index header for message type */ ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SMtest.c-100- /* Look up the master SOHM table */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SMtest.c:101: if(NULL == (table = (H5SM_master_table_t *)H5AC_protect(f, dxpl_id, H5AC_SOHM_TABLE, H5F_SOHM_ADDR(f), &cache_udata, H5AC_READ))) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SMtest.c-102- HGOTO_ERROR(H5E_SOHM, H5E_CANTPROTECT, FAIL, "unable to load SOHM master table") ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SMtest.c-117- /* Release resources */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SMtest.c:118: if(table && H5AC_unprotect(f, dxpl_id, H5AC_SOHM_TABLE, H5F_SOHM_ADDR(f), table, H5AC__NO_FLAGS_SET) < 0) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SMtest.c-119- HDONE_ERROR(H5E_SOHM, H5E_CANTUNPROTECT, FAIL, "unable to close SOHM master table") ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fint.c-676- /* Get the VFD values to cache */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fint.c:677: f->shared->maxaddr = H5FD_get_maxaddr(lf); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fint.c-678- if(!H5F_addr_defined(f->shared->maxaddr)) ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fint.c-1709- kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fint.c:1710: H5F_addr_encode_len(H5F_SIZEOF_ADDR(f), pp, addr); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fint.c-1711- ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fint.c-1808- kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fint.c:1809: H5F_addr_decode_len(H5F_SIZEOF_ADDR(f), pp, addr_p); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fint.c-1810- ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fint.c-1858-herr_t kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fint.c:1859:H5F_set_sohm_addr(H5F_t *f, haddr_t addr) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fint.c-1860-{ ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fint.c-1870- FUNC_LEAVE_NOAPI(SUCCEED) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fint.c:1871:} /* H5F_set_sohm_addr() */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fint.c-1872- ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5B2private.h-130-H5_DLL H5B2_t *H5B2_open(H5F_t *f, hid_t dxpl_id, haddr_t addr, void *ctx_udata); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5B2private.h:131:H5_DLL herr_t H5B2_get_addr(const H5B2_t *bt2, haddr_t *addr/*out*/); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5B2private.h-132-H5_DLL herr_t H5B2_insert(H5B2_t *bt2, hid_t dxpl_id, void *udata); ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Opublic.h-156-H5_DLL hid_t H5Oopen(hid_t loc_id, const char *name, hid_t lapl_id); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Opublic.h:157:H5_DLL hid_t H5Oopen_by_addr(hid_t loc_id, haddr_t addr); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Opublic.h-158-H5_DLL hid_t H5Oopen_by_idx(hid_t loc_id, const char *group_name, ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fcwfs.c-194- if(H5HG_FREE_SIZE(f->shared->cwfs[cwfsno]) >= need) { kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fcwfs.c:195: *addr = H5HG_ADDR(f->shared->cwfs[cwfsno]); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fcwfs.c-196- found = TRUE; ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fcwfs.c-214- kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fcwfs.c:215: was_extended = H5MF_try_extend(f, dxpl_id, H5FD_MEM_GHEAP, H5HG_ADDR(f->shared->cwfs[cwfsno]), (hsize_t)H5HG_SIZE(f->shared->cwfs[cwfsno]), (hsize_t)new_need); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fcwfs.c-216- if(was_extended < 0) ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fcwfs.c-218- else if(was_extended == TRUE) { kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fcwfs.c:219: if(H5HG_extend(f, dxpl_id, H5HG_ADDR(f->shared->cwfs[cwfsno]), new_need) < 0) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fcwfs.c-220- HGOTO_ERROR(H5E_HEAP, H5E_CANTRESIZE, FAIL, "unable to extend global heap collection") kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fcwfs.c:221: *addr = H5HG_ADDR(f->shared->cwfs[cwfsno]); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fcwfs.c-222- found = TRUE; ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Oefl.c-353- kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Oefl.c:354: ret_value = (size_t)H5F_SIZEOF_ADDR(f) + /*heap address */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Oefl.c-355- 2 + /*slots allocated*/ ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HFhuge.c-163- /* Retrieve the v2 B-tree's address in the file */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HFhuge.c:164: if(H5B2_get_addr(hdr->huge_bt2, &hdr->huge_bt2_addr) < 0) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HFhuge.c-165- HGOTO_ERROR(H5E_HEAP, H5E_CANTGET, FAIL, "can't get v2 B-tree address for tracking 'huge' heap objects") ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Adense.c-218- /* Retrieve the heap's address in the file */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Adense.c:219: if(H5HF_get_heap_addr(fheap, &ainfo->fheap_addr) < 0) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Adense.c-220- HGOTO_ERROR(H5E_ATTR, H5E_CANTGETSIZE, FAIL, "can't get fractal heap address") ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Adense.c-252- /* Retrieve the v2 B-tree's address in the file */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Adense.c:253: if(H5B2_get_addr(bt2_name, &ainfo->name_bt2_addr) < 0) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Adense.c-254- HGOTO_ERROR(H5E_ATTR, H5E_CANTGET, FAIL, "can't get v2 B-tree address for name index") ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Adense.c-273- /* Retrieve the v2 B-tree's address in the file */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Adense.c:274: if(H5B2_get_addr(bt2_corder, &ainfo->corder_bt2_addr) < 0) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Adense.c-275- HGOTO_ERROR(H5E_ATTR, H5E_CANTGET, FAIL, "can't get v2 B-tree address for creation order index") ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Adense.c-373- /* Retrieve the address of the shared message's fractal heap */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Adense.c:374: if(H5SM_get_fheap_addr(f, dxpl_id, H5O_ATTR_ID, &shared_fheap_addr) < 0) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Adense.c-375- HGOTO_ERROR(H5E_ATTR, H5E_CANTGET, NULL, "can't get shared message heap address") ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Adense.c-480- /* Retrieve the address of the shared message's fractal heap */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Adense.c:481: if(H5SM_get_fheap_addr(f, dxpl_id, H5O_ATTR_ID, &shared_fheap_addr) < 0) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Adense.c-482- HGOTO_ERROR(H5E_ATTR, H5E_CANTGET, FAIL, "can't get shared message heap address") ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Adense.c-776- /* Retrieve the address of the shared message's fractal heap */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Adense.c:777: if(H5SM_get_fheap_addr(f, dxpl_id, H5O_ATTR_ID, &shared_fheap_addr) < 0) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Adense.c-778- HGOTO_ERROR(H5E_ATTR, H5E_CANTGET, FAIL, "can't get shared message heap address") ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Adense.c-922- /* Retrieve the address of the shared message's fractal heap */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Adense.c:923: if(H5SM_get_fheap_addr(f, dxpl_id, H5O_ATTR_ID, &shared_fheap_addr) < 0) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Adense.c-924- HGOTO_ERROR(H5E_ATTR, H5E_CANTGET, FAIL, "can't get shared message heap address") ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Adense.c-1205- /* Retrieve the address of the shared message's fractal heap */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Adense.c:1206: if(H5SM_get_fheap_addr(f, dxpl_id, H5O_ATTR_ID, &shared_fheap_addr) < 0) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Adense.c-1207- HGOTO_ERROR(H5E_ATTR, H5E_CANTGET, FAIL, "can't get shared message heap address") ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Adense.c-1376- /* Retrieve the address of the shared message's fractal heap */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Adense.c:1377: if(H5SM_get_fheap_addr(f, dxpl_id, H5O_ATTR_ID, &shared_fheap_addr) < 0) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Adense.c-1378- HGOTO_ERROR(H5E_ATTR, H5E_CANTGET, FAIL, "can't get shared message heap address") ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Adense.c-1622- /* Retrieve the address of the shared message's fractal heap */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Adense.c:1623: if(H5SM_get_fheap_addr(f, dxpl_id, H5O_ATTR_ID, &shared_fheap_addr) < 0) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Adense.c-1624- HGOTO_ERROR(H5E_ATTR, H5E_CANTGET, FAIL, "can't get shared message heap address") ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Adense.c-1725- /* Retrieve the address of the shared message's fractal heap */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Adense.c:1726: if(H5SM_get_fheap_addr(f, dxpl_id, H5O_ATTR_ID, &shared_fheap_addr) < 0) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Adense.c-1727- HGOTO_ERROR(H5E_ATTR, H5E_CANTGET, FAIL, "can't get shared message heap address") ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Gname.c-597- /* Search for name of object */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Gname.c:598: if((len = H5G_get_name_by_addr(file, lapl_id, dxpl_id, loc->oloc, name, size)) < 0) { kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Gname.c-599- H5I_dec_ref(file); ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Gname.c-1287-ssize_t kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Gname.c:1288:H5G_get_name_by_addr(hid_t file, hid_t lapl_id, hid_t dxpl_id, const H5O_loc_t *loc, kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Gname.c-1289- char *name, size_t size) ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Gname.c-1350- FUNC_LEAVE_NOAPI(ret_value) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Gname.c:1351:} /* end H5G_get_name_by_addr() */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Gname.c-1352- ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HLpkg.h-64- H5F_SIZEOF_SIZE(F) + /*free list head */ \ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HLpkg.h:65: H5F_SIZEOF_ADDR(F)) /*data address */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HLpkg.h-66- ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fquery.c-366-uint8_t kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fquery.c:367:H5F_sizeof_addr(const H5F_t *f) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fquery.c-368-{ ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fquery.c-375- FUNC_LEAVE_NOAPI(f->shared->sizeof_addr) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fquery.c:376:} /* end H5F_sizeof_addr() */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fquery.c-377- ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fquery.c-417-haddr_t kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fquery.c:418:H5F_get_sohm_addr(const H5F_t *f) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fquery.c-419-{ ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fquery.c-426- FUNC_LEAVE_NOAPI(f->shared->sohm_addr) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fquery.c:427:} /* end H5F_get_sohm_addr() */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fquery.c-428- ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fquery.c-674-haddr_t kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fquery.c:675:H5F_get_base_addr(const H5F_t *f) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fquery.c-676-{ ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fquery.c-684- FUNC_LEAVE_NOAPI(f->shared->sblock->base_addr) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fquery.c:685:} /* end H5F_get_base_addr() */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fquery.c-686- ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fquery.c-1036-hbool_t kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fquery.c:1037:H5F_is_tmp_addr(const H5F_t *f, haddr_t addr) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fquery.c-1038-{ ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fquery.c-1045- FUNC_LEAVE_NOAPI(H5F_addr_le(f->shared->tmp_addr, addr)) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fquery.c:1046:} /* end H5F_is_tmp_addr() */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fquery.c-1047- ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HFprivate.h-113-H5_DLL herr_t H5HF_get_id_len(H5HF_t *fh, size_t *id_len_p/*out*/); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HFprivate.h:114:H5_DLL herr_t H5HF_get_heap_addr(const H5HF_t *fh, haddr_t *heap_addr/*out*/); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HFprivate.h-115-H5_DLL herr_t H5HF_insert(H5HF_t *fh, hid_t dxpl_id, size_t size, ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Oshmesg.c-204- ret_value = (size_t)(1 + /* Version number */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Oshmesg.c:205: H5F_SIZEOF_ADDR(f) + /* Table address */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Oshmesg.c-206- 1); /* Number of indexes */ ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HFbtree2.c-223- /* Determine the size of addresses & lengths in the file */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HFbtree2.c:224: ctx->sizeof_addr = H5F_SIZEOF_ADDR(f); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HFbtree2.c-225- ctx->sizeof_size = H5F_SIZEOF_SIZE(f); ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HFbtree2.c-295- /* Determine the size of addresses & lengths in the file */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HFbtree2.c:296: ctx->sizeof_addr = H5F_SIZEOF_ADDR(f); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HFbtree2.c-297- ctx->sizeof_size = H5F_SIZEOF_SIZE(f); ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5FD.c-1579-haddr_t kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5FD.c:1580:H5FD_get_maxaddr(const H5FD_t *file) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5FD.c-1581-{ ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5FD.c-1592- FUNC_LEAVE_NOAPI(ret_value) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5FD.c:1593:} /* end H5FD_get_maxaddr() */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5FD.c-1594- ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5FD.c-2024-herr_t kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5FD.c:2025:H5FD_set_base_addr(H5FD_t *file, haddr_t base_addr) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5FD.c-2026-{ ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5FD.c-2035- FUNC_LEAVE_NOAPI(SUCCEED) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5FD.c:2036:} /* end H5FD_set_base_addr() */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5FD.c-2037- ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5FD.c-2052-haddr_t kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5FD.c:2053:H5FD_get_base_addr(const H5FD_t *file) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5FD.c-2054-{ ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5FD.c-2060- FUNC_LEAVE_NOAPI(file->base_addr) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5FD.c:2061:} /* end H5FD_get_base_addr() */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5FD.c-2062- ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5FDmpi.c-172-haddr_t kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5FDmpi.c:173:H5FD_mpi_MPIOff_to_haddr(MPI_Offset mpi_off) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5FDmpi.c-174-{ ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fprivate.h-231-#define H5F_HAS_FEATURE(F,FL) ((F)->shared->lf->feature_flags & (FL)) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fprivate.h:232:#define H5F_BASE_ADDR(F) ((F)->shared->sblock->base_addr) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fprivate.h-233-#define H5F_SYM_LEAF_K(F) ((F)->shared->sblock->sym_leaf_k) ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fprivate.h-235-#define H5F_NREFS(F) ((F)->shared->nrefs) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fprivate.h:236:#define H5F_SIZEOF_ADDR(F) ((F)->shared->sizeof_addr) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fprivate.h-237-#define H5F_SIZEOF_SIZE(F) ((F)->shared->sizeof_size) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fprivate.h:238:#define H5F_SOHM_ADDR(F) ((F)->shared->sohm_addr) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fprivate.h:239:#define H5F_SET_SOHM_ADDR(F, A) ((F)->shared->sohm_addr = (A)) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fprivate.h-240-#define H5F_SOHM_VERS(F) ((F)->shared->sohm_vers) ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fprivate.h-256-#define H5F_USE_TMP_SPACE(F) ((F)->shared->use_tmp_space) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fprivate.h:257:#define H5F_IS_TMP_ADDR(F, ADDR) (H5F_addr_le((F)->shared->tmp_addr, (ADDR))) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fprivate.h-258-#else /* H5F_PACKAGE */ ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fprivate.h-273-#define H5F_HAS_FEATURE(F,FL) (H5F_has_feature(F,FL)) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fprivate.h:274:#define H5F_BASE_ADDR(F) (H5F_get_base_addr(F)) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fprivate.h-275-#define H5F_SYM_LEAF_K(F) (H5F_sym_leaf_k(F)) ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fprivate.h-277-#define H5F_NREFS(F) (H5F_get_nrefs(F)) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fprivate.h:278:#define H5F_SIZEOF_ADDR(F) (H5F_sizeof_addr(F)) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fprivate.h-279-#define H5F_SIZEOF_SIZE(F) (H5F_sizeof_size(F)) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fprivate.h:280:#define H5F_SOHM_ADDR(F) (H5F_get_sohm_addr(F)) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fprivate.h:281:#define H5F_SET_SOHM_ADDR(F, A) (H5F_set_sohm_addr((F), (A))) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fprivate.h-282-#define H5F_SOHM_VERS(F) (H5F_get_sohm_vers(F)) ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fprivate.h-298-#define H5F_USE_TMP_SPACE(F) (H5F_use_tmp_space(F)) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fprivate.h:299:#define H5F_IS_TMP_ADDR(F, ADDR) (H5F_is_tmp_addr((F), (ADDR))) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fprivate.h-300-#endif /* H5F_PACKAGE */ ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fprivate.h-303-/* Macros to encode/decode offset/length's for storing in the file */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fprivate.h:304:#define H5F_ENCODE_OFFSET(f,p,o) switch(H5F_SIZEOF_ADDR(f)) { \ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fprivate.h-305- case 4: UINT32ENCODE(p,o); break; \ ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fprivate.h-309- kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fprivate.h:310:#define H5F_DECODE_OFFSET(f,p,o) switch (H5F_SIZEOF_ADDR (f)) { \ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fprivate.h-311- case 4: UINT32DECODE(p, o); break; \ ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fprivate.h-541-/* Functions than retrieve values set/cached from the superblock/FCPL */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fprivate.h:542:H5_DLL haddr_t H5F_get_base_addr(const H5F_t *f); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fprivate.h-543-H5_DLL unsigned H5F_sym_leaf_k(const H5F_t *f); ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fprivate.h-545-H5_DLL unsigned H5F_get_nrefs(const H5F_t *f); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fprivate.h:546:H5_DLL uint8_t H5F_sizeof_addr(const H5F_t *f); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fprivate.h-547-H5_DLL uint8_t H5F_sizeof_size(const H5F_t *f); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fprivate.h:548:H5_DLL haddr_t H5F_get_sohm_addr(const H5F_t *f); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fprivate.h:549:H5_DLL herr_t H5F_set_sohm_addr(H5F_t *f, haddr_t addr); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fprivate.h-550-H5_DLL unsigned H5F_get_sohm_vers(const H5F_t *f); ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fprivate.h-566-H5_DLL hbool_t H5F_use_tmp_space(const H5F_t *f); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fprivate.h:567:H5_DLL hbool_t H5F_is_tmp_addr(const H5F_t *f, haddr_t addr); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fprivate.h-568- ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Dmpio.c-1473-static int kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Dmpio.c:1474:H5D__cmp_chunk_addr(const void *chunk_addr_info1, const void *chunk_addr_info2) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Dmpio.c-1475-{ ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Dmpio.c-1483- FUNC_LEAVE_NOAPI(H5F_addr_cmp(addr1, addr2)) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Dmpio.c:1484:} /* end H5D__cmp_chunk_addr() */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Dmpio.c-1485- ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HFiblock.c-573- /* (temp. file space does not need to be freed) */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HFiblock.c:574: if(!H5F_IS_TMP_ADDR(hdr->f, iblock->addr)) { kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HFiblock.c-575-/* Currently, the old block data is "thrown away" after the space is reallocated, ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HFiblock.c-736- /* (temp. file space does not need to be freed) */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HFiblock.c:737: if(!H5F_IS_TMP_ADDR(hdr->f, iblock->addr)) { kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HFiblock.c-738-/* Currently, the old block data is "thrown away" after the space is reallocated, ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HFiblock.c-1494-herr_t kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HFiblock.c:1495:H5HF_man_iblock_entry_addr(H5HF_indirect_t *iblock, unsigned entry, haddr_t *child_addr) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HFiblock.c-1496-{ ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HFiblock.c-1508- FUNC_LEAVE_NOAPI(SUCCEED) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HFiblock.c:1509:} /* end H5HF_man_iblock_entry_addr() */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HFiblock.c-1510- ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5B.c-120- 4 + /*type, level, num entries */ \ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5B.c:121: 2*H5F_SIZEOF_ADDR(F)) /*left and right sibling addresses */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5B.c-122- ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5B.c-1718- shared->two_k = 2 * H5F_KVALUE(f, type); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5B.c:1719: shared->sizeof_addr = H5F_SIZEOF_ADDR(f); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5B.c-1720- shared->sizeof_len = H5F_SIZEOF_SIZE(f); ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5B.c-1724- shared->sizeof_rnode = ((size_t)H5B_SIZEOF_HDR(f) + /*node header */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5B.c:1725: shared->two_k * H5F_SIZEOF_ADDR(f) + /*child pointers */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5B.c-1726- (shared->two_k + 1) * shared->sizeof_rkey); /*keys */ ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5FDcore.c-116- */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5FDcore.c:117:#define MAXADDR ((haddr_t)((~(size_t)0)-1)) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5FDcore.c-118-#define ADDR_OVERFLOW(A) (HADDR_UNDEF==(A) || (A) > (haddr_t)MAXADDR) ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5B2.c-332-herr_t kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5B2.c:333:H5B2_get_addr(const H5B2_t *bt2, haddr_t *addr_p) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5B2.c-334-{ ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5B2.c-346- FUNC_LEAVE_NOAPI(SUCCEED) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5B2.c:347:} /* end H5B2_get_addr() */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5B2.c-348- ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5O.c-350- * The address of the HDF5 file on disk has no effect on kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5O.c:351: * H5Oopen_by_addr(), nor does the use of any unusual file kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5O.c-352- * drivers. The "address" is really the offset within the ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5O.c-364-hid_t kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5O.c:365:H5Oopen_by_addr(hid_t loc_id, haddr_t addr) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5O.c-366-{ ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5O.c-397- FUNC_LEAVE_API(ret_value) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5O.c:398:} /* end H5Oopen_by_addr() */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5O.c-399- ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5O.c-1152- oh->sizeof_size = H5F_SIZEOF_SIZE(f); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5O.c:1153: oh->sizeof_addr = H5F_SIZEOF_ADDR(f); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5O.c-1154-#ifdef H5O_ENABLE_BAD_MESG_COUNT ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5O.c-1485-{ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5O.c:1486: haddr_t addr = H5O_OH_GET_ADDR(oh); /* Object header address */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5O.c-1487- int ret_value; /* Return value */ ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5O.c-3046-haddr_t kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5O.c:3047:H5O_get_oh_addr(const H5O_t *oh) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5O.c-3048-{ ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5O.c-3055- FUNC_LEAVE_NOAPI(oh->chunk[0].addr) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5O.c:3056:} /* end H5O_get_oh_addr() */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5O.c-3057- ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Dlayout.c-155- case H5D_CONTIGUOUS: kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Dlayout.c:156: ret_value += H5F_SIZEOF_ADDR(f); /* Address of data */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Dlayout.c-157- ret_value += H5F_SIZEOF_SIZE(f); /* Length of data */ ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Dlayout.c-168- /* B-tree address */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Dlayout.c:169: ret_value += H5F_SIZEOF_ADDR(f); /* Address of data */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Dlayout.c-170- break; ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5FDlog.c-155- */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5FDlog.c:156:#define MAXADDR (((haddr_t)1<<(8*sizeof(HDoff_t)-1))-1) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5FDlog.c-157-#define ADDR_OVERFLOW(A) (HADDR_UNDEF==(A) || ((A) & ~(haddr_t)MAXADDR)) ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5FSpkg.h-76- + H5F_SIZEOF_SIZE(f) /* Max. size of section to track */ \ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5FSpkg.h:77: + H5F_SIZEOF_ADDR(f) /* Address of serialized free space sections */ \ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5FSpkg.h-78- + H5F_SIZEOF_SIZE(f) /* Size of serialized free space sections used */ \ ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5FSpkg.h-87- /* Free space serialized sections specific fields */ \ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5FSpkg.h:88: + H5F_SIZEOF_ADDR(f) /* Address of free space header for these sections */ \ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5FSpkg.h-89- ) ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Dbtree.c-134- H5D_chunk_ud_t *udata); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Dbtree.c:135:static herr_t H5D__btree_idx_get_addr(const H5D_chk_idx_info_t *idx_info, kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Dbtree.c-136- H5D_chunk_ud_t *udata); ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Dbtree.c-980-static herr_t kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Dbtree.c:981:H5D__btree_idx_get_addr(const H5D_chk_idx_info_t *idx_info, H5D_chunk_ud_t *udata) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Dbtree.c-982-{ ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Dbtree.c-1001- FUNC_LEAVE_NOAPI(ret_value) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Dbtree.c:1002:} /* H5D__btree_idx_get_addr() */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Dbtree.c-1003- ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HF.c-315-herr_t kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HF.c:316:H5HF_get_heap_addr(const H5HF_t *fh, haddr_t *heap_addr_p) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HF.c-317-{ ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HF.c-329- FUNC_LEAVE_NOAPI(SUCCEED) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HF.c:330:} /* end H5HF_get_heap_addr() */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HF.c-331- ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SMprivate.h-62-H5_DLL htri_t H5SM_type_shared(H5F_t *f, unsigned type_id, hid_t dxpl_id); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SMprivate.h:63:H5_DLL herr_t H5SM_get_fheap_addr(H5F_t *f, hid_t dxpl_id, unsigned type_id, kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SMprivate.h-64- haddr_t *fheap_addr); ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Tpublic.h-415-#define H5T_NATIVE_OPAQUE (H5OPEN H5T_NATIVE_OPAQUE_g) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Tpublic.h:416:#define H5T_NATIVE_HADDR (H5OPEN H5T_NATIVE_HADDR_g) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Tpublic.h-417-#define H5T_NATIVE_HSIZE (H5OPEN H5T_NATIVE_HSIZE_g) ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Gprivate.h-51- (H5F_SIZEOF_SIZE(F) + /*offset of name into heap */ \ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Gprivate.h:52: H5F_SIZEOF_ADDR(F) + /*address of object header */ \ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Gprivate.h-53- 4 + /*entry type */ \ ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Gprivate.h-272- hbool_t *cached, hid_t lapl_id, hid_t dxpl_id); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Gprivate.h:273:H5_DLL ssize_t H5G_get_name_by_addr(hid_t fid, hid_t lapl_id, hid_t dxpl_id, kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Gprivate.h-274- const struct H5O_loc_t *loc, char* name, size_t size); ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Ostab.c-229- /* Set return value */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Ostab.c:230: ret_value = (size_t)(2 * H5F_SIZEOF_ADDR(f)); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Ostab.c-231- ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Oshared.c-136- /* Retrieve the fractal heap address for shared messages */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Oshared.c:137: if(H5SM_get_fheap_addr(f, dxpl_id, type->id, &fheap_addr) < 0) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Oshared.c-138- HGOTO_ERROR(H5E_OHDR, H5E_CANTGET, NULL, "can't get fheap address for shared messages") ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Oshared.c-173- kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Oshared.c:174: if(open_oh && oloc.addr == H5O_OH_GET_ADDR(open_oh)) { kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Oshared.c-175- /* The shared message is in the already opened object header. This ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Oshared.c-261- kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Oshared.c:262: if(open_oh && oloc.addr == H5O_OH_GET_ADDR(open_oh)) { kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Oshared.c-263- /* The shared message is in the already opened object header. This ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Oshared.c-486- (size_t)1 + /*the type field */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Oshared.c:487: (size_t)H5F_SIZEOF_ADDR(f); /*sharing by another obj hdr */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Oshared.c-488- } /* end if */ ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Gent.c-160- case H5G_CACHED_STAB: kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Gent.c:161: HDassert(2 * H5F_SIZEOF_ADDR(f) <= H5G_SIZEOF_SCRATCH); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Gent.c-162- H5F_addr_decode(f, pp, &(ent->cache.stab.btree_addr)); ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Gent.c-265- case H5G_CACHED_STAB: kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Gent.c:266: HDassert(2 * H5F_SIZEOF_ADDR(f) <= H5G_SIZEOF_SCRATCH); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Gent.c-267- H5F_addr_encode(f, pp, ent->cache.stab.btree_addr); ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5FDdirect.c-116- */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5FDdirect.c:117:#define MAXADDR (((haddr_t)1<<(8*sizeof(HDoff_t)-1))-1) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5FDdirect.c-118-#define ADDR_OVERFLOW(A) (HADDR_UNDEF==(A) || \ ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SMcache.c-141- kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SMcache.c:142: HDassert(addr == H5F_SOHM_ADDR(f)); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SMcache.c-143- HDassert(addr != HADDR_UNDEF); ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SMcache.c-505- /* Read messages into the list array */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SMcache.c:506: ctx.sizeof_addr = H5F_SIZEOF_ADDR(udata->f); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SMcache.c-507- for(x = 0; x < udata->header->num_messages; x++) { ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SMcache.c-598- mesgs_written = 0; kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SMcache.c:599: ctx.sizeof_addr = H5F_SIZEOF_ADDR(f); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SMcache.c-600- for(x = 0; x < list->header->list_max && mesgs_written < list->header->num_messages; x++) { ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5R.c-947- /* Get name, length, etc. */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5R.c:948: if((ret_value = H5G_get_name_by_addr(file_id, lapl_id, dxpl_id, &oloc, name, size)) < 0) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5R.c-949- HGOTO_ERROR(H5E_REFERENCE, H5E_CANTGET, FAIL, "can't determine name") ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fsuper.c-281- /* Set the base address for the file in the VFD now */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fsuper.c:282: if(H5FD_set_base_addr(f->shared->lf, super_addr) < 0) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fsuper.c-283- HGOTO_ERROR(H5E_FILE, H5E_CANTSET, FAIL, "failed to set base address for file driver") ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fsuper.c-420- */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fsuper.c:421: if(H5FD_set_base_addr(f->shared->lf, sblock->base_addr) < 0) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Fsuper.c-422- HGOTO_ERROR(H5E_FILE, H5E_CANTINIT, FAIL, "failed to set base address for file driver") ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SMpkg.h-55- + (unsigned)2 /* creation index of message in OH */ \ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SMpkg.h:56: + H5F_SIZEOF_ADDR(f) /* address of OH */ \ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SMpkg.h-57- ) ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SMpkg.h-70- + (unsigned)(3 * 2) /* B-tree cutoff, list cutoff, # of shared messages */ \ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SMpkg.h:71: + H5F_SIZEOF_ADDR(f) /* Location of list or B-tree */ \ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SMpkg.h:72: + H5F_SIZEOF_ADDR(f) /* Address of heap */ \ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SMpkg.h-73- ) ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HL.c-132- /* Allocate new heap structure */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HL.c:133: if(NULL == (heap = H5HL_new(H5F_SIZEOF_SIZE(f), H5F_SIZEOF_ADDR(f), H5HL_SIZEOF_HDR(f)))) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HL.c-134- HGOTO_ERROR(H5E_HEAP, H5E_CANTALLOC, FAIL, "can't allocate new heap struct") ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HL.c-461- prfx_udata.sizeof_size = H5F_SIZEOF_SIZE(f); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HL.c:462: prfx_udata.sizeof_addr = H5F_SIZEOF_ADDR(f); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HL.c-463- prfx_udata.prfx_addr = addr; ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HL.c-1074- prfx_udata.sizeof_size = H5F_SIZEOF_SIZE(f); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HL.c:1075: prfx_udata.sizeof_addr = H5F_SIZEOF_ADDR(f); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HL.c-1076- prfx_udata.prfx_addr = addr; ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HL.c-1150- prfx_udata.sizeof_size = H5F_SIZEOF_SIZE(f); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HL.c:1151: prfx_udata.sizeof_addr = H5F_SIZEOF_ADDR(f); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HL.c-1152- prfx_udata.prfx_addr = addr; ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HL.c-1202- prfx_udata.sizeof_size = H5F_SIZEOF_SIZE(f); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HL.c:1203: prfx_udata.sizeof_addr = H5F_SIZEOF_ADDR(f); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5HL.c-1204- prfx_udata.prfx_addr = addr; ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5FDprivate.h-129-H5_DLL haddr_t H5FD_get_eof(const H5FD_t *file); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5FDprivate.h:130:H5_DLL haddr_t H5FD_get_maxaddr(const H5FD_t *file); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5FDprivate.h-131-H5_DLL herr_t H5FD_get_feature_flags(const H5FD_t *file, unsigned long *feature_flags); ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5FDprivate.h-140-H5_DLL herr_t H5FD_get_vfd_handle(H5FD_t *file, hid_t fapl, void** file_handle); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5FDprivate.h:141:H5_DLL herr_t H5FD_set_base_addr(H5FD_t *file, haddr_t base_addr); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5FDprivate.h:142:H5_DLL haddr_t H5FD_get_base_addr(const H5FD_t *file); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5FDprivate.h-143- ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5FDprivate.h-146-/* General routines */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5FDprivate.h:147:H5_DLL haddr_t H5FD_mpi_MPIOff_to_haddr(MPI_Offset mpi_off); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5FDprivate.h-148-H5_DLL herr_t H5FD_mpi_haddr_to_MPIOff(haddr_t addr, MPI_Offset *mpi_off/*out*/); ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5FDsec2.c-117- */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5FDsec2.c:118:#define MAXADDR (((haddr_t)1<<(8*sizeof(HDoff_t)-1))-1) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5FDsec2.c-119-#define ADDR_OVERFLOW(A) (HADDR_UNDEF==(A) || ((A) & ~(haddr_t)MAXADDR)) ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Gobj.c-257- else kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Gobj.c:258: hdr_size = (size_t)(4 + 2 * H5F_SIZEOF_ADDR(f)); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Gobj.c-259- ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Oalloc.c-787- */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Oalloc.c:788: cont_size = H5O_ALIGN_OH(oh, (size_t)(H5F_SIZEOF_ADDR(f) + H5F_SIZEOF_SIZE(f))); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5Oalloc.c-789- for(u = 0, curr_msg = &oh->mesg[0]; u < oh->nmesgs; u++, curr_msg++) { ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5F.c-974- HGOTO_ERROR(H5E_FILE, H5E_CANTGET, FAIL, "unable to get file size") kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5F.c:975: base_addr = H5FD_get_base_addr(file->shared->lf); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5F.c-976- ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-137- /* File should not already have a SOHM table */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c:138: HDassert(!H5F_addr_defined(H5F_SOHM_ADDR(f))); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-139- ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-215- /* Record the address of the master table in the file */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c:216: H5F_SET_SOHM_ADDR(f, table_addr); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-217- ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-224- /* Write shared message information to the superblock extension */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c:225: sohm_table.addr = H5F_SOHM_ADDR(f); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-226- sohm_table.version = H5F_SOHM_VERS(f); ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-355- /* Look up the master SOHM table */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c:356: if(H5F_addr_defined(H5F_SOHM_ADDR(f))) { kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-357- H5SM_table_cache_ud_t cache_udata; /* User-data for callback */ ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-361- kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c:362: if(NULL == (table = (H5SM_master_table_t *)H5AC_protect(f, dxpl_id, H5AC_SOHM_TABLE, H5F_SOHM_ADDR(f), &cache_udata, H5AC_READ))) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-363- HGOTO_ERROR(H5E_SOHM, H5E_CANTPROTECT, FAIL, "unable to load SOHM master table") ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-377- /* Release the master SOHM table */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c:378: if(table && H5AC_unprotect(f, dxpl_id, H5AC_SOHM_TABLE, H5F_SOHM_ADDR(f), table, H5AC__NO_FLAGS_SET) < 0) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-379- HDONE_ERROR(H5E_SOHM, H5E_CANTUNPROTECT, FAIL, "unable to close SOHM master table") ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-398-herr_t kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c:399:H5SM_get_fheap_addr(H5F_t *f, hid_t dxpl_id, unsigned type_id, haddr_t *fheap_addr) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-400-{ ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-415- /* Look up the master SOHM table */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c:416: if(NULL == (table = (H5SM_master_table_t *)H5AC_protect(f, dxpl_id, H5AC_SOHM_TABLE, H5F_SOHM_ADDR(f), &cache_udata, H5AC_READ))) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-417- HGOTO_ERROR(H5E_SOHM, H5E_CANTPROTECT, FAIL, "unable to load SOHM master table") ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-427- /* Release the master SOHM table */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c:428: if(table && H5AC_unprotect(f, dxpl_id, H5AC_SOHM_TABLE, H5F_SOHM_ADDR(f), table, H5AC__NO_FLAGS_SET) < 0) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-429- HDONE_ERROR(H5E_SOHM, H5E_CANTUNPROTECT, FAIL, "unable to close SOHM master table") ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-431- FUNC_LEAVE_NOAPI(ret_value) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c:432:} /* end H5SM_get_fheap_addr() */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-433- ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-488- /* Retrieve the v2 B-tree's address in the file */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c:489: if(H5B2_get_addr(bt2, &tree_addr) < 0) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-490- HGOTO_ERROR(H5E_SOHM, H5E_CANTGET, FAIL, "can't get v2 B-tree address for SOHM index") ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-509- kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c:510: if(H5HF_get_heap_addr(fheap, &(header->heap_addr)) < 0) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-511- HGOTO_ERROR(H5E_SOHM, H5E_CANTGETSIZE, FAIL, "can't get fractal heap address") ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-731- /* Retrieve the v2 B-tree's address in the file */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c:732: if(H5B2_get_addr(bt2, &tree_addr) < 0) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-733- HGOTO_ERROR(H5E_SOHM, H5E_CANTGET, FAIL, "can't get v2 B-tree address for SOHM index") ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-879- /* If sharing is disabled in this file, don't share the message */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c:880: if(!H5F_addr_defined(H5F_SOHM_ADDR(f))) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-881- HGOTO_DONE(FALSE) ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-942- kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c:943: if(NULL == (my_table = (H5SM_master_table_t *)H5AC_protect(f, dxpl_id, H5AC_SOHM_TABLE, H5F_SOHM_ADDR(f), &cache_udata, H5AC_READ))) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-944- HGOTO_ERROR(H5E_SOHM, H5E_CANTPROTECT, FAIL, "unable to load SOHM master table") ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-966- /* Release the master SOHM table, if we protected it */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c:967: if(my_table && my_table != table && H5AC_unprotect(f, dxpl_id, H5AC_SOHM_TABLE, H5F_SOHM_ADDR(f), my_table, H5AC__NO_FLAGS_SET) < 0) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-968- HDONE_ERROR(H5E_SOHM, H5E_CANTUNPROTECT, FAIL, "unable to close SOHM master table") ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-1074- /* Look up the master SOHM table */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c:1075: if(NULL == (table = (H5SM_master_table_t *)H5AC_protect(f, dxpl_id, H5AC_SOHM_TABLE, H5F_SOHM_ADDR(f), &cache_udata, H5AC_WRITE))) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-1076- HGOTO_ERROR(H5E_SOHM, H5E_CANTPROTECT, FAIL, "unable to load SOHM master table") ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-1123- /* Release the master SOHM table */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c:1124: if(table && H5AC_unprotect(f, dxpl_id, H5AC_SOHM_TABLE, H5F_SOHM_ADDR(f), table, cache_flags) < 0) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-1125- HDONE_ERROR(H5E_SOHM, H5E_CANTUNPROTECT, FAIL, "unable to close SOHM master table") ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-1403- else { kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c:1404: shared.u.loc.oh_addr = H5O_OH_GET_ADDR(open_oh); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-1405- ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-1530- HDassert(f); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c:1531: HDassert(H5F_addr_defined(H5F_SOHM_ADDR(f))); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-1532- HDassert(sh_mesg); ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-1540- /* Look up the master SOHM table */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c:1541: if(NULL == (table = (H5SM_master_table_t *)H5AC_protect(f, dxpl_id, H5AC_SOHM_TABLE, H5F_SOHM_ADDR(f), &cache_udata, H5AC_WRITE))) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-1542- HGOTO_ERROR(H5E_SOHM, H5E_CANTPROTECT, FAIL, "unable to load SOHM master table") ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-1555- /* Release the master SOHM table */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c:1556: if(H5AC_unprotect(f, dxpl_id, H5AC_SOHM_TABLE, H5F_SOHM_ADDR(f), table, cache_flags) < 0) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-1557- HGOTO_ERROR(H5E_SOHM, H5E_CANTUNPROTECT, FAIL, "unable to close SOHM master table") ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-1573- /* Release the master SOHM table (should only happen on error) */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c:1574: if(table && H5AC_unprotect(f, dxpl_id, H5AC_SOHM_TABLE, H5F_SOHM_ADDR(f), table, cache_flags) < 0) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-1575- HDONE_ERROR(H5E_SOHM, H5E_CANTUNPROTECT, FAIL, "unable to close SOHM master table") ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-1980- /* Set SOHM info from file */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c:1981: H5F_SET_SOHM_ADDR(f, sohm_table.addr); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-1982- H5F_SET_SOHM_VERS(f, sohm_table.version); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-1983- H5F_SET_SOHM_NINDEXES(f, sohm_table.nindexes); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c:1984: HDassert(H5F_addr_defined(H5F_SOHM_ADDR(f))); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-1985- HDassert(H5F_SOHM_NINDEXES(f) > 0 && H5F_SOHM_NINDEXES(f) <= H5O_SHMESG_MAX_NINDEXES); ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-1990- /* Read the rest of the SOHM table information from the cache */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c:1991: if(NULL == (table = (H5SM_master_table_t *)H5AC_protect(f, dxpl_id, H5AC_SOHM_TABLE, H5F_SOHM_ADDR(f), &cache_udata, H5AC_READ))) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-1992- HGOTO_ERROR(H5E_SOHM, H5E_CANTPROTECT, FAIL, "unable to load SOHM master table") ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-2029- /* No SOHM info in file */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c:2030: H5F_SET_SOHM_ADDR(f, HADDR_UNDEF); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-2031- H5F_SET_SOHM_VERS(f, 0); ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-2041- /* Release the master SOHM table if we took it out of the cache */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c:2042: if(table && H5AC_unprotect(f, dxpl_id, H5AC_SOHM_TABLE, H5F_SOHM_ADDR(f), table, H5AC__NO_FLAGS_SET) < 0) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-2043- HDONE_ERROR(H5E_SOHM, H5E_CANTUNPROTECT, FAIL, "unable to close SOHM master table") ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-2153- /* Look up the master SOHM table */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c:2154: if(NULL == (table = (H5SM_master_table_t *)H5AC_protect(f, dxpl_id, H5AC_SOHM_TABLE, H5F_SOHM_ADDR(f), &tbl_cache_udata, H5AC_READ))) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-2155- HGOTO_ERROR(H5E_SOHM, H5E_CANTPROTECT, FAIL, "unable to load SOHM master table") ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-2229- HDONE_ERROR(H5E_SOHM, H5E_CANTUNPROTECT, FAIL, "unable to close SOHM index") kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c:2230: if(table && H5AC_unprotect(f, dxpl_id, H5AC_SOHM_TABLE, H5F_SOHM_ADDR(f), table, H5AC__NO_FLAGS_SET) < 0) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-2231- HDONE_ERROR(H5E_SOHM, H5E_CANTUNPROTECT, FAIL, "unable to close SOHM master table") ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-2393- kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c:2394: if(NULL == open_oh || mesg->u.mesg_loc.oh_addr != H5O_OH_GET_ADDR(open_oh)) { kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-2395- /* Open the object in the file */ ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-2711- HDassert(f); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c:2712: HDassert(H5F_addr_defined(H5F_SOHM_ADDR(f))); kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-2713- HDassert(finfo); ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-2718- /* Look up the master SOHM table */ kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c:2719: if(NULL == (table = (H5SM_master_table_t *)H5AC_protect(f, dxpl_id, H5AC_SOHM_TABLE, H5F_SOHM_ADDR(f), &cache_udata, H5AC_READ))) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-2720- HGOTO_ERROR(H5E_SOHM, H5E_CANTPROTECT, FAIL, "unable to load SOHM master table") ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-2770- HDONE_ERROR(H5E_SOHM, H5E_CANTCLOSEOBJ, FAIL, "can't close v2 B-tree for SOHM index") kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c:2771: if(table && H5AC_unprotect(f, dxpl_id, H5AC_SOHM_TABLE, H5F_SOHM_ADDR(f), table, H5AC__NO_FLAGS_SET) < 0) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-2772- HDONE_ERROR(H5E_SOHM, H5E_CANTUNPROTECT, FAIL, "unable to close SOHM master table") ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/CMakeLists.txt-326-#----------------------------------------------------------------------------- kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/CMakeLists.txt:327:include (${HDF_RESOURCES_EXT_DIR}/HDFMacros.cmake) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/CMakeLists.txt:328:include (${HDF_RESOURCES_EXT_DIR}/HDFLibMacros.cmake) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/CMakeLists.txt:329:include (${HDF_RESOURCES_DIR}/HDF5Macros.cmake) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/CMakeLists.txt-330- ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/CMakeLists.txt-382-#----------------------------------------------------------------------------- kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/CMakeLists.txt:383:include (${HDF_RESOURCES_DIR}/ConfigureChecks.cmake) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/CMakeLists.txt-384- ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/CMakeLists.txt-517- kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/CMakeLists.txt:518:include (${HDF_RESOURCES_DIR}/HDFCompilerFlags.cmake) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/CMakeLists.txt-519- ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/CMakeLists.txt-685- kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/CMakeLists.txt:686: include (${HDF5_SOURCE_DIR}/CTestConfig.cmake) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/CMakeLists.txt-687- configure_file (${HDF_RESOURCES_DIR}/CTestCustom.cmake ${HDF5_BINARY_DIR}/CTestCustom.ctest @ONLY) ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/CMakeLists.txt-753- option (HDF5_ENABLE_F2003 "Enable FORTRAN 2003 Standard" ON) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/CMakeLists.txt:754: include (${HDF_RESOURCES_EXT_DIR}/HDFUseFortran.cmake) kissplice-2.5.3/bcalm/gatb-core/gatb-core/thirdparty/hdf5/CMakeLists.txt-755- if (HDF5_ENABLE_F2003) ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/test/functional/test1/run.sh-34-# we get the check directory kissplice-2.5.3/bcalm/gatb-core/gatb-core/test/functional/test1/run.sh:35:TEST_CHECK_TMP=`readlink -f $0` kissplice-2.5.3/bcalm/gatb-core/gatb-core/test/functional/test1/run.sh:36:export set TEST_CHECK=`dirname $TEST_CHECK_TMP`/check kissplice-2.5.3/bcalm/gatb-core/gatb-core/test/functional/test1/run.sh-37-echo $TEST_CHECK ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/test/jenkins/test-suite-macos-10.9.5-gcc-4.2.1.sh-88- do kissplice-2.5.3/bcalm/gatb-core/gatb-core/test/jenkins/test-suite-macos-10.9.5-gcc-4.2.1.sh:89: prg_name=`echo $code_snippet | cut -d'/' -f4 | cut -d'.' -f1` kissplice-2.5.3/bcalm/gatb-core/gatb-core/test/jenkins/test-suite-macos-10.9.5-gcc-4.2.1.sh-90- clang++ $code_snippet -Iinclude -Llib -lgatbcore -lhdf5 -ldl -lz -lpthread -std=c++0x -O3 -DBOOST_NO_CXX11_RVALUE_REFERENCES=1 -o $prg_name ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/test/jenkins/finalize-release-debian.sh-43- kissplice-2.5.3/bcalm/gatb-core/gatb-core/test/jenkins/finalize-release-debian.sh:44:MAJOR="`echo $RELEASE_TO_BUILD |cut -d. -f1`" kissplice-2.5.3/bcalm/gatb-core/gatb-core/test/jenkins/finalize-release-debian.sh:45:MINOR="`echo $RELEASE_TO_BUILD |cut -d. -f2`" kissplice-2.5.3/bcalm/gatb-core/gatb-core/test/jenkins/finalize-release-debian.sh:46:PATCH="`echo $RELEASE_TO_BUILD |cut -d. -f3`" kissplice-2.5.3/bcalm/gatb-core/gatb-core/test/jenkins/finalize-release-debian.sh-47- ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/test/jenkins/test-bin-debian7-64bits-gcc-4.7.sh-86-do kissplice-2.5.3/bcalm/gatb-core/gatb-core/test/jenkins/test-bin-debian7-64bits-gcc-4.7.sh:87: prg_name=`echo $code_snippet | cut -d'/' -f4 | cut -d'.' -f1` kissplice-2.5.3/bcalm/gatb-core/gatb-core/test/jenkins/test-bin-debian7-64bits-gcc-4.7.sh-88- g++ $code_snippet -Iinclude -Llib -lgatbcore -lhdf5 -ldl -lz -lpthread -std=c++0x -O3 -o $prg_name ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/test/jenkins/test-suite-debian7-64bits-gcc-4.7.sh-95- do kissplice-2.5.3/bcalm/gatb-core/gatb-core/test/jenkins/test-suite-debian7-64bits-gcc-4.7.sh:96: prg_name=`echo $code_snippet | cut -d'/' -f4 | cut -d'.' -f1` kissplice-2.5.3/bcalm/gatb-core/gatb-core/test/jenkins/test-suite-debian7-64bits-gcc-4.7.sh-97- g++ $code_snippet -Iinclude -Llib -lgatbcore -lhdf5 -ldl -lz -lpthread -std=c++0x -O3 -o $prg_name ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/test/jenkins/finalize-release-macos.sh-42- kissplice-2.5.3/bcalm/gatb-core/gatb-core/test/jenkins/finalize-release-macos.sh:43:MAJOR="`echo $RELEASE_TO_BUILD |cut -d. -f1`" kissplice-2.5.3/bcalm/gatb-core/gatb-core/test/jenkins/finalize-release-macos.sh:44:MINOR="`echo $RELEASE_TO_BUILD |cut -d. -f2`" kissplice-2.5.3/bcalm/gatb-core/gatb-core/test/jenkins/finalize-release-macos.sh:45:PATCH="`echo $RELEASE_TO_BUILD |cut -d. -f3`" kissplice-2.5.3/bcalm/gatb-core/gatb-core/test/jenkins/finalize-release-macos.sh-46- ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/test/jenkins/leon/tool-leon-functional-tests-test.sh-85- echo " $BIN_DIR/$BANK_SNIPPET_3 -in ${srafile} -kmer-size $KMER_SIZE" kissplice-2.5.3/bcalm/gatb-core/gatb-core/test/jenkins/leon/tool-leon-functional-tests-test.sh:86: RESULT=`time $BIN_DIR/$BANK_SNIPPET_3 -in ${srafile} -kmer-size $KMER_SIZE` kissplice-2.5.3/bcalm/gatb-core/gatb-core/test/jenkins/leon/tool-leon-functional-tests-test.sh-87- echo " answer : $RESULT" ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/test/jenkins/leon/tool-leon-functional-tests-test.sh-127- echo " ${line}: $FILESIZE Mb" kissplice-2.5.3/bcalm/gatb-core/gatb-core/test/jenkins/leon/tool-leon-functional-tests-test.sh:128: fname=`echo $line | cut -d'.' -f 1` kissplice-2.5.3/bcalm/gatb-core/gatb-core/test/jenkins/leon/tool-leon-functional-tests-test.sh-129- ref_file_size_map[$fname]=$FILESIZE ############################################## kissplice-2.5.3/bcalm/gatb-core/gatb-core/test/jenkins/test-bin-macos-10.9.5-gcc-4.2.1.sh-76-do kissplice-2.5.3/bcalm/gatb-core/gatb-core/test/jenkins/test-bin-macos-10.9.5-gcc-4.2.1.sh:77: prg_name=`echo $code_snippet | cut -d'/' -f4 | cut -d'.' -f1` kissplice-2.5.3/bcalm/gatb-core/gatb-core/test/jenkins/test-bin-macos-10.9.5-gcc-4.2.1.sh-78- clang++ $code_snippet -Iinclude -Llib -lgatbcore -lhdf5 -ldl -lz -lpthread -std=c++0x -O3 -DBOOST_NO_CXX11_RVALUE_REFERENCES=1 -o $prg_name ############################################## kissplice-2.5.3/thirdparty/kissreads/missing-139- # Could not run --version or --help. This is probably someone kissplice-2.5.3/thirdparty/kissreads/missing:140: # running `$TOOL --version' or `$TOOL --help' to check whether kissplice-2.5.3/thirdparty/kissreads/missing-141- # $TOOL exists and not knowing $TOOL uses missing. ############################################## kissplice-2.5.3/thirdparty/kissreads/missing-173- from any GNU archive site." kissplice-2.5.3/thirdparty/kissreads/missing:174: files=`sed -n 's/^[ ]*A[CM]_CONFIG_HEADER(\([^)]*\)).*/\1/p' ${configure_ac}` kissplice-2.5.3/thirdparty/kissreads/missing-175- test -z "$files" && files="config.h" ############################################## kissplice-2.5.3/thirdparty/kissreads/missing-202- proper tools for further handling them. kissplice-2.5.3/thirdparty/kissreads/missing:203: You can get \`$1' as part of \`Autoconf' from any GNU kissplice-2.5.3/thirdparty/kissreads/missing-204- archive site." kissplice-2.5.3/thirdparty/kissreads/missing-205- kissplice-2.5.3/thirdparty/kissreads/missing:206: file=`echo "$*" | sed -n "$sed_output"` kissplice-2.5.3/thirdparty/kissreads/missing:207: test -z "$file" && file=`echo "$*" | sed -n "$sed_minuso"` kissplice-2.5.3/thirdparty/kissreads/missing-208- if test -f "$file"; then ############################################## kissplice-2.5.3/thirdparty/kissreads/missing-231- *.y) kissplice-2.5.3/thirdparty/kissreads/missing:232: SRCFILE=`echo "$LASTARG" | sed 's/y$/c/'` kissplice-2.5.3/thirdparty/kissreads/missing-233- if test -f "$SRCFILE"; then ############################################## kissplice-2.5.3/thirdparty/kissreads/missing-235- fi kissplice-2.5.3/thirdparty/kissreads/missing:236: SRCFILE=`echo "$LASTARG" | sed 's/y$/h/'` kissplice-2.5.3/thirdparty/kissreads/missing-237- if test -f "$SRCFILE"; then ############################################## kissplice-2.5.3/thirdparty/kissreads/missing-261- *.l) kissplice-2.5.3/thirdparty/kissreads/missing:262: SRCFILE=`echo "$LASTARG" | sed 's/l$/c/'` kissplice-2.5.3/thirdparty/kissreads/missing-263- if test -f "$SRCFILE"; then ############################################## kissplice-2.5.3/thirdparty/kissreads/missing-280- kissplice-2.5.3/thirdparty/kissreads/missing:281: file=`echo "$*" | sed -n "$sed_output"` kissplice-2.5.3/thirdparty/kissreads/missing:282: test -z "$file" && file=`echo "$*" | sed -n "$sed_minuso"` kissplice-2.5.3/thirdparty/kissreads/missing-283- if test -f "$file"; then ############################################## kissplice-2.5.3/thirdparty/kissreads/missing-300- # The file to touch is that specified with -o ... kissplice-2.5.3/thirdparty/kissreads/missing:301: file=`echo "$*" | sed -n "$sed_output"` kissplice-2.5.3/thirdparty/kissreads/missing:302: test -z "$file" && file=`echo "$*" | sed -n "$sed_minuso"` kissplice-2.5.3/thirdparty/kissreads/missing-303- if test -z "$file"; then kissplice-2.5.3/thirdparty/kissreads/missing-304- # ... or it is the one specified with @setfilename ... kissplice-2.5.3/thirdparty/kissreads/missing:305: infile=`echo "$*" | sed 's/.* \([^ ]*\) *$/\1/'` kissplice-2.5.3/thirdparty/kissreads/missing-306- file=`sed -n ' ############################################## kissplice-2.5.3/thirdparty/kissreads/missing-312- # ... or it is derived from the source name (dir/f.texi becomes f.info) kissplice-2.5.3/thirdparty/kissreads/missing:313: test -z "$file" && file=`echo "$infile" | sed 's,.*/,,;s,.[^.]*$,,'`.info kissplice-2.5.3/thirdparty/kissreads/missing-314- fi ############################################## kissplice-2.5.3/thirdparty/kissreads/missing-336- *o*) kissplice-2.5.3/thirdparty/kissreads/missing:337: firstarg=`echo "$firstarg" | sed s/o//` kissplice-2.5.3/thirdparty/kissreads/missing-338- tar "$firstarg" "$@" && exit 0 ############################################## kissplice-2.5.3/thirdparty/kissreads/missing-342- *h*) kissplice-2.5.3/thirdparty/kissreads/missing:343: firstarg=`echo "$firstarg" | sed s/h//` kissplice-2.5.3/thirdparty/kissreads/missing-344- tar "$firstarg" "$@" && exit 0 ############################################## kissplice-2.5.3/debian/patches/spelling.patch-254- /* Release the master SOHM table */ kissplice-2.5.3/debian/patches/spelling.patch:255: if(H5AC_unprotect(f, dxpl_id, H5AC_SOHM_TABLE, H5F_SOHM_ADDR(f), table, cache_flags) < 0) kissplice-2.5.3/debian/patches/spelling.patch-256---- a/bcalm/gatb-core/gatb-core/src/gatb/system/api/IFileSystem.hpp ############################################## kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5F.c-974- HGOTO_ERROR(H5E_FILE, H5E_CANTGET, FAIL, "unable to get file size") kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5F.c:975: base_addr = H5FD_get_base_addr(file->shared->lf); kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5F.c-976- ############################################## kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-137- /* File should not already have a SOHM table */ kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c:138: HDassert(!H5F_addr_defined(H5F_SOHM_ADDR(f))); kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-139- ############################################## kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-215- /* Record the address of the master table in the file */ kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c:216: H5F_SET_SOHM_ADDR(f, table_addr); kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-217- ############################################## kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-224- /* Write shared message information to the superblock extension */ kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c:225: sohm_table.addr = H5F_SOHM_ADDR(f); kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-226- sohm_table.version = H5F_SOHM_VERS(f); ############################################## kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-355- /* Look up the master SOHM table */ kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c:356: if(H5F_addr_defined(H5F_SOHM_ADDR(f))) { kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-357- H5SM_table_cache_ud_t cache_udata; /* User-data for callback */ ############################################## kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-361- kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c:362: if(NULL == (table = (H5SM_master_table_t *)H5AC_protect(f, dxpl_id, H5AC_SOHM_TABLE, H5F_SOHM_ADDR(f), &cache_udata, H5AC_READ))) kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-363- HGOTO_ERROR(H5E_SOHM, H5E_CANTPROTECT, FAIL, "unable to load SOHM master table") ############################################## kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-377- /* Release the master SOHM table */ kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c:378: if(table && H5AC_unprotect(f, dxpl_id, H5AC_SOHM_TABLE, H5F_SOHM_ADDR(f), table, H5AC__NO_FLAGS_SET) < 0) kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-379- HDONE_ERROR(H5E_SOHM, H5E_CANTUNPROTECT, FAIL, "unable to close SOHM master table") ############################################## kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-398-herr_t kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c:399:H5SM_get_fheap_addr(H5F_t *f, hid_t dxpl_id, unsigned type_id, haddr_t *fheap_addr) kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-400-{ ############################################## kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-415- /* Look up the master SOHM table */ kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c:416: if(NULL == (table = (H5SM_master_table_t *)H5AC_protect(f, dxpl_id, H5AC_SOHM_TABLE, H5F_SOHM_ADDR(f), &cache_udata, H5AC_READ))) kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-417- HGOTO_ERROR(H5E_SOHM, H5E_CANTPROTECT, FAIL, "unable to load SOHM master table") ############################################## kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-427- /* Release the master SOHM table */ kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c:428: if(table && H5AC_unprotect(f, dxpl_id, H5AC_SOHM_TABLE, H5F_SOHM_ADDR(f), table, H5AC__NO_FLAGS_SET) < 0) kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-429- HDONE_ERROR(H5E_SOHM, H5E_CANTUNPROTECT, FAIL, "unable to close SOHM master table") ############################################## kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-431- FUNC_LEAVE_NOAPI(ret_value) kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c:432:} /* end H5SM_get_fheap_addr() */ kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-433- ############################################## kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-488- /* Retrieve the v2 B-tree's address in the file */ kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c:489: if(H5B2_get_addr(bt2, &tree_addr) < 0) kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-490- HGOTO_ERROR(H5E_SOHM, H5E_CANTGET, FAIL, "can't get v2 B-tree address for SOHM index") ############################################## kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-509- kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c:510: if(H5HF_get_heap_addr(fheap, &(header->heap_addr)) < 0) kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-511- HGOTO_ERROR(H5E_SOHM, H5E_CANTGETSIZE, FAIL, "can't get fractal heap address") ############################################## kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-731- /* Retrieve the v2 B-tree's address in the file */ kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c:732: if(H5B2_get_addr(bt2, &tree_addr) < 0) kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-733- HGOTO_ERROR(H5E_SOHM, H5E_CANTGET, FAIL, "can't get v2 B-tree address for SOHM index") ############################################## kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-879- /* If sharing is disabled in this file, don't share the message */ kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c:880: if(!H5F_addr_defined(H5F_SOHM_ADDR(f))) kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-881- HGOTO_DONE(FALSE) ############################################## kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-942- kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c:943: if(NULL == (my_table = (H5SM_master_table_t *)H5AC_protect(f, dxpl_id, H5AC_SOHM_TABLE, H5F_SOHM_ADDR(f), &cache_udata, H5AC_READ))) kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-944- HGOTO_ERROR(H5E_SOHM, H5E_CANTPROTECT, FAIL, "unable to load SOHM master table") ############################################## kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-966- /* Release the master SOHM table, if we protected it */ kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c:967: if(my_table && my_table != table && H5AC_unprotect(f, dxpl_id, H5AC_SOHM_TABLE, H5F_SOHM_ADDR(f), my_table, H5AC__NO_FLAGS_SET) < 0) kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-968- HDONE_ERROR(H5E_SOHM, H5E_CANTUNPROTECT, FAIL, "unable to close SOHM master table") ############################################## kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-1074- /* Look up the master SOHM table */ kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c:1075: if(NULL == (table = (H5SM_master_table_t *)H5AC_protect(f, dxpl_id, H5AC_SOHM_TABLE, H5F_SOHM_ADDR(f), &cache_udata, H5AC_WRITE))) kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-1076- HGOTO_ERROR(H5E_SOHM, H5E_CANTPROTECT, FAIL, "unable to load SOHM master table") ############################################## kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-1123- /* Release the master SOHM table */ kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c:1124: if(table && H5AC_unprotect(f, dxpl_id, H5AC_SOHM_TABLE, H5F_SOHM_ADDR(f), table, cache_flags) < 0) kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-1125- HDONE_ERROR(H5E_SOHM, H5E_CANTUNPROTECT, FAIL, "unable to close SOHM master table") ############################################## kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-1403- else { kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c:1404: shared.u.loc.oh_addr = H5O_OH_GET_ADDR(open_oh); kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-1405- ############################################## kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-1530- HDassert(f); kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c:1531: HDassert(H5F_addr_defined(H5F_SOHM_ADDR(f))); kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-1532- HDassert(sh_mesg); ############################################## kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-1540- /* Look up the master SOHM table */ kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c:1541: if(NULL == (table = (H5SM_master_table_t *)H5AC_protect(f, dxpl_id, H5AC_SOHM_TABLE, H5F_SOHM_ADDR(f), &cache_udata, H5AC_WRITE))) kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-1542- HGOTO_ERROR(H5E_SOHM, H5E_CANTPROTECT, FAIL, "unable to load SOHM master table") ############################################## kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-1555- /* Release the master SOHM table */ kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c:1556: if(H5AC_unprotect(f, dxpl_id, H5AC_SOHM_TABLE, H5F_SOHM_ADDR(f), table, cache_flags) < 0) kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-1557- HGOTO_ERROR(H5E_SOHM, H5E_CANTUNPROTECT, FAIL, "unable to close SOHM master table") ############################################## kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-1573- /* Release the master SOHM table (should only happen on error) */ kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c:1574: if(table && H5AC_unprotect(f, dxpl_id, H5AC_SOHM_TABLE, H5F_SOHM_ADDR(f), table, cache_flags) < 0) kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-1575- HDONE_ERROR(H5E_SOHM, H5E_CANTUNPROTECT, FAIL, "unable to close SOHM master table") ############################################## kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-1980- /* Set SOHM info from file */ kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c:1981: H5F_SET_SOHM_ADDR(f, sohm_table.addr); kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-1982- H5F_SET_SOHM_VERS(f, sohm_table.version); kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-1983- H5F_SET_SOHM_NINDEXES(f, sohm_table.nindexes); kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c:1984: HDassert(H5F_addr_defined(H5F_SOHM_ADDR(f))); kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-1985- HDassert(H5F_SOHM_NINDEXES(f) > 0 && H5F_SOHM_NINDEXES(f) <= H5O_SHMESG_MAX_NINDEXES); ############################################## kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-1990- /* Read the rest of the SOHM table information from the cache */ kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c:1991: if(NULL == (table = (H5SM_master_table_t *)H5AC_protect(f, dxpl_id, H5AC_SOHM_TABLE, H5F_SOHM_ADDR(f), &cache_udata, H5AC_READ))) kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-1992- HGOTO_ERROR(H5E_SOHM, H5E_CANTPROTECT, FAIL, "unable to load SOHM master table") ############################################## kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-2029- /* No SOHM info in file */ kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c:2030: H5F_SET_SOHM_ADDR(f, HADDR_UNDEF); kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-2031- H5F_SET_SOHM_VERS(f, 0); ############################################## kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-2041- /* Release the master SOHM table if we took it out of the cache */ kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c:2042: if(table && H5AC_unprotect(f, dxpl_id, H5AC_SOHM_TABLE, H5F_SOHM_ADDR(f), table, H5AC__NO_FLAGS_SET) < 0) kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-2043- HDONE_ERROR(H5E_SOHM, H5E_CANTUNPROTECT, FAIL, "unable to close SOHM master table") ############################################## kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-2153- /* Look up the master SOHM table */ kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c:2154: if(NULL == (table = (H5SM_master_table_t *)H5AC_protect(f, dxpl_id, H5AC_SOHM_TABLE, H5F_SOHM_ADDR(f), &tbl_cache_udata, H5AC_READ))) kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-2155- HGOTO_ERROR(H5E_SOHM, H5E_CANTPROTECT, FAIL, "unable to load SOHM master table") ############################################## kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-2229- HDONE_ERROR(H5E_SOHM, H5E_CANTUNPROTECT, FAIL, "unable to close SOHM index") kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c:2230: if(table && H5AC_unprotect(f, dxpl_id, H5AC_SOHM_TABLE, H5F_SOHM_ADDR(f), table, H5AC__NO_FLAGS_SET) < 0) kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-2231- HDONE_ERROR(H5E_SOHM, H5E_CANTUNPROTECT, FAIL, "unable to close SOHM master table") ############################################## kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-2393- kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c:2394: if(NULL == open_oh || mesg->u.mesg_loc.oh_addr != H5O_OH_GET_ADDR(open_oh)) { kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-2395- /* Open the object in the file */ ############################################## kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-2711- HDassert(f); kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c:2712: HDassert(H5F_addr_defined(H5F_SOHM_ADDR(f))); kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-2713- HDassert(finfo); ############################################## kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-2718- /* Look up the master SOHM table */ kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c:2719: if(NULL == (table = (H5SM_master_table_t *)H5AC_protect(f, dxpl_id, H5AC_SOHM_TABLE, H5F_SOHM_ADDR(f), &cache_udata, H5AC_READ))) kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-2720- HGOTO_ERROR(H5E_SOHM, H5E_CANTPROTECT, FAIL, "unable to load SOHM master table") ############################################## kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-2770- HDONE_ERROR(H5E_SOHM, H5E_CANTCLOSEOBJ, FAIL, "can't close v2 B-tree for SOHM index") kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c:2771: if(table && H5AC_unprotect(f, dxpl_id, H5AC_SOHM_TABLE, H5F_SOHM_ADDR(f), table, H5AC__NO_FLAGS_SET) < 0) kissplice-2.5.3/.pc/spelling.patch/bcalm/gatb-core/gatb-core/thirdparty/hdf5/src/H5SM.c-2772- HDONE_ERROR(H5E_SOHM, H5E_CANTUNPROTECT, FAIL, "unable to close SOHM master table")