=========================================================== .___ __ __ _________________ __ __ __| _/|__|/ |_ / ___\_` __ \__ \ | | \/ __ | | \\_ __\ / /_/ > | \// __ \| | / /_/ | | || | \___ /|__| (____ /____/\____ | |__||__| /_____/ \/ \/ grep rough audit - static analysis tool v2.8 written by @Wireghoul =================================[justanotherhacker.com]=== ncbi-entrez-direct-14.0.20201030+dfsg/espell-2-PERL="perl" ncbi-entrez-direct-14.0.20201030+dfsg/espell:3:dir=`dirname "$0"` ncbi-entrez-direct-14.0.20201030+dfsg/espell-4-case "`uname -s`" in ############################################## ncbi-entrez-direct-14.0.20201030+dfsg/espell-7- if perl -e 'exit $^O !~ /^MSWin/'; then ncbi-entrez-direct-14.0.20201030+dfsg/espell:8: dir=`cygpath -w "$dir"` ncbi-entrez-direct-14.0.20201030+dfsg/espell-9- fi ############################################## ncbi-entrez-direct-14.0.20201030+dfsg/ftp-cp-2-PERL="perl" ncbi-entrez-direct-14.0.20201030+dfsg/ftp-cp:3:dir=`dirname "$0"` ncbi-entrez-direct-14.0.20201030+dfsg/ftp-cp-4-case "`uname -s`" in ############################################## ncbi-entrez-direct-14.0.20201030+dfsg/ftp-cp-7- if perl -e 'exit $^O !~ /^MSWin/'; then ncbi-entrez-direct-14.0.20201030+dfsg/ftp-cp:8: dir=`cygpath -w "$dir"` ncbi-entrez-direct-14.0.20201030+dfsg/ftp-cp-9- fi ############################################## ncbi-entrez-direct-14.0.20201030+dfsg/reorder-columns-8-do ncbi-entrez-direct-14.0.20201030+dfsg/reorder-columns:9: cmd=`echo "$cmd$com$col"` ncbi-entrez-direct-14.0.20201030+dfsg/reorder-columns-10- com=", $" ############################################## ncbi-entrez-direct-14.0.20201030+dfsg/pm-refresh-17- ncbi-entrez-direct-14.0.20201030+dfsg/pm-refresh:18:osname=`uname -s | sed -e 's/_NT-.*$/_NT/; s/^MINGW[0-9]*/CYGWIN/'` ncbi-entrez-direct-14.0.20201030+dfsg/pm-refresh-19-if [ "$osname" = "CYGWIN_NT" -a -x /bin/cygpath ] ncbi-entrez-direct-14.0.20201030+dfsg/pm-refresh-20-then ncbi-entrez-direct-14.0.20201030+dfsg/pm-refresh:21: target=`cygpath -w "$target"` ncbi-entrez-direct-14.0.20201030+dfsg/pm-refresh-22-fi ############################################## ncbi-entrez-direct-14.0.20201030+dfsg/sort-uniq-count-rank-4-then ncbi-entrez-direct-14.0.20201030+dfsg/sort-uniq-count-rank:5: flags=`echo " $*" | sed 's/[^bfinrs]//g'` ncbi-entrez-direct-14.0.20201030+dfsg/sort-uniq-count-rank-6- if [ -z "$flags" ] ############################################## ncbi-entrez-direct-14.0.20201030+dfsg/has-asp-34- APPPATH=`type -path ascp` ncbi-entrez-direct-14.0.20201030+dfsg/has-asp:35: APPPATH=`dirname "$APPPATH"` ncbi-entrez-direct-14.0.20201030+dfsg/has-asp-36-fi ############################################## ncbi-entrez-direct-14.0.20201030+dfsg/index-themes-205-find "$target" -name "*.mrg.gz" -delete ncbi-entrez-direct-14.0.20201030+dfsg/index-themes:206:osname=`uname -s | sed -e 's/_NT-.*$/_NT/; s/^MINGW[0-9]*/CYGWIN/'` ncbi-entrez-direct-14.0.20201030+dfsg/index-themes-207-if [ "$osname" = "CYGWIN_NT" -a -x /bin/cygpath ] ncbi-entrez-direct-14.0.20201030+dfsg/index-themes-208-then ncbi-entrez-direct-14.0.20201030+dfsg/index-themes:209: target=`cygpath -w "$target"` ncbi-entrez-direct-14.0.20201030+dfsg/index-themes-210-fi ############################################## ncbi-entrez-direct-14.0.20201030+dfsg/index-themes-221-target="$WORKING/Postings" ncbi-entrez-direct-14.0.20201030+dfsg/index-themes:222:osname=`uname -s | sed -e 's/_NT-.*$/_NT/; s/^MINGW[0-9]*/CYGWIN/'` ncbi-entrez-direct-14.0.20201030+dfsg/index-themes-223-if [ "$osname" = "CYGWIN_NT" -a -x /bin/cygpath ] ncbi-entrez-direct-14.0.20201030+dfsg/index-themes-224-then ncbi-entrez-direct-14.0.20201030+dfsg/index-themes:225: target=`cygpath -w "$target"` ncbi-entrez-direct-14.0.20201030+dfsg/index-themes-226-fi ############################################## ncbi-entrez-direct-14.0.20201030+dfsg/transmute-2-PERL="perl" ncbi-entrez-direct-14.0.20201030+dfsg/transmute:3:dir=`dirname "$0"` ncbi-entrez-direct-14.0.20201030+dfsg/transmute-4-case "`uname -s`" in ############################################## ncbi-entrez-direct-14.0.20201030+dfsg/transmute-7- if perl -e 'exit $^O !~ /^MSWin/'; then ncbi-entrez-direct-14.0.20201030+dfsg/transmute:8: dir=`cygpath -w "$dir"` ncbi-entrez-direct-14.0.20201030+dfsg/transmute-9- fi ############################################## ncbi-entrez-direct-14.0.20201030+dfsg/test-eutils-36- ncbi-entrez-direct-14.0.20201030+dfsg/test-eutils:37:dir=`dirname "$0"` ncbi-entrez-direct-14.0.20201030+dfsg/test-eutils-38- ############################################## ncbi-entrez-direct-14.0.20201030+dfsg/econtact-2-PERL="perl" ncbi-entrez-direct-14.0.20201030+dfsg/econtact:3:dir=`dirname "$0"` ncbi-entrez-direct-14.0.20201030+dfsg/econtact-4-case "`uname -s`" in ############################################## ncbi-entrez-direct-14.0.20201030+dfsg/econtact-7- if perl -e 'exit $^O !~ /^MSWin/'; then ncbi-entrez-direct-14.0.20201030+dfsg/econtact:8: dir=`cygpath -w "$dir"` ncbi-entrez-direct-14.0.20201030+dfsg/econtact-9- fi ############################################## ncbi-entrez-direct-14.0.20201030+dfsg/pm-promote-12- ncbi-entrez-direct-14.0.20201030+dfsg/pm-promote:13:osname=`uname -s | sed -e 's/_NT-.*$/_NT/; s/^MINGW[0-9]*/CYGWIN/'` ncbi-entrez-direct-14.0.20201030+dfsg/pm-promote-14-if [ "$osname" = "CYGWIN_NT" -a -x /bin/cygpath ] ncbi-entrez-direct-14.0.20201030+dfsg/pm-promote-15-then ncbi-entrez-direct-14.0.20201030+dfsg/pm-promote:16: target=`cygpath -w "$target"` ncbi-entrez-direct-14.0.20201030+dfsg/pm-promote-17-fi ############################################## ncbi-entrez-direct-14.0.20201030+dfsg/eaddress-2-PERL="perl" ncbi-entrez-direct-14.0.20201030+dfsg/eaddress:3:dir=`dirname "$0"` ncbi-entrez-direct-14.0.20201030+dfsg/eaddress-4-case "`uname -s`" in ############################################## ncbi-entrez-direct-14.0.20201030+dfsg/eaddress-7- if perl -e 'exit $^O !~ /^MSWin/'; then ncbi-entrez-direct-14.0.20201030+dfsg/eaddress:8: dir=`cygpath -w "$dir"` ncbi-entrez-direct-14.0.20201030+dfsg/eaddress-9- fi ############################################## ncbi-entrez-direct-14.0.20201030+dfsg/asp-cp-34- APPPATH=`type -path ascp` ncbi-entrez-direct-14.0.20201030+dfsg/asp-cp:35: APPPATH=`dirname "$APPPATH"` ncbi-entrez-direct-14.0.20201030+dfsg/asp-cp-36-fi ############################################## ncbi-entrez-direct-14.0.20201030+dfsg/run-ncbi-converter-48- if ($platform eq 'win') { ncbi-entrez-direct-14.0.20201030+dfsg/run-ncbi-converter:49: exec('unzip', $archive); ncbi-entrez-direct-14.0.20201030+dfsg/run-ncbi-converter-50- } else { ncbi-entrez-direct-14.0.20201030+dfsg/run-ncbi-converter:51: system('gunzip', '-n', $archive); ncbi-entrez-direct-14.0.20201030+dfsg/run-ncbi-converter-52- rename("$ARGV[0].$platform", $ARGV[0]); ############################################## ncbi-entrez-direct-14.0.20201030+dfsg/run-ncbi-converter-58-shift; ncbi-entrez-direct-14.0.20201030+dfsg/run-ncbi-converter:59:exec($executable, @ARGV); ncbi-entrez-direct-14.0.20201030+dfsg/run-ncbi-converter-60- ############################################## ncbi-entrez-direct-14.0.20201030+dfsg/ftp-ls-2-PERL="perl" ncbi-entrez-direct-14.0.20201030+dfsg/ftp-ls:3:dir=`dirname "$0"` ncbi-entrez-direct-14.0.20201030+dfsg/ftp-ls-4-case "`uname -s`" in ############################################## ncbi-entrez-direct-14.0.20201030+dfsg/ftp-ls-7- if perl -e 'exit $^O !~ /^MSWin/'; then ncbi-entrez-direct-14.0.20201030+dfsg/ftp-ls:8: dir=`cygpath -w "$dir"` ncbi-entrez-direct-14.0.20201030+dfsg/ftp-ls-9- fi ############################################## ncbi-entrez-direct-14.0.20201030+dfsg/download-sequence-7-do ncbi-entrez-direct-14.0.20201030+dfsg/download-sequence:8: filt=`echo "$filt -e $1"` ncbi-entrez-direct-14.0.20201030+dfsg/download-sequence-9- shift ############################################## ncbi-entrez-direct-14.0.20201030+dfsg/download-sequence-30- ncbi-entrez-direct-14.0.20201030+dfsg/download-sequence:31:filt=`echo "grep$filt"` ncbi-entrez-direct-14.0.20201030+dfsg/download-sequence-32-download ############################################## ncbi-entrez-direct-14.0.20201030+dfsg/entrez-phrase-search-78- do ncbi-entrez-direct-14.0.20201030+dfsg/entrez-phrase-search:79: counts=`do_one_query "\"$qry\" [$field]"` ncbi-entrez-direct-14.0.20201030+dfsg/entrez-phrase-search-80- if [ $counts -gt 0 ] ############################################## ncbi-entrez-direct-14.0.20201030+dfsg/fetch-extras-50- ncbi-entrez-direct-14.0.20201030+dfsg/fetch-extras:51:osname=`uname -s | sed -e 's/_NT-.*$/_NT/; s/^MINGW[0-9]*/CYGWIN/'` ncbi-entrez-direct-14.0.20201030+dfsg/fetch-extras-52-if [ "$osname" = "CYGWIN_NT" -a -x /bin/cygpath ] ncbi-entrez-direct-14.0.20201030+dfsg/fetch-extras-53-then ncbi-entrez-direct-14.0.20201030+dfsg/fetch-extras:54: target=`cygpath -w "$target"` ncbi-entrez-direct-14.0.20201030+dfsg/fetch-extras-55-fi ############################################## ncbi-entrez-direct-14.0.20201030+dfsg/pm-prepare-10- ncbi-entrez-direct-14.0.20201030+dfsg/pm-prepare:11:osname=`uname -s | sed -e 's/_NT-.*$/_NT/; s/^MINGW[0-9]*/CYGWIN/'` ncbi-entrez-direct-14.0.20201030+dfsg/pm-prepare-12-if [ "$osname" = "CYGWIN_NT" -a -x /bin/cygpath ] ncbi-entrez-direct-14.0.20201030+dfsg/pm-prepare-13-then ncbi-entrez-direct-14.0.20201030+dfsg/pm-prepare:14: target=`cygpath -w "$target"` ncbi-entrez-direct-14.0.20201030+dfsg/pm-prepare-15-fi ############################################## ncbi-entrez-direct-14.0.20201030+dfsg/index-extras-230-find "$target" -name "*.mrg.gz" -delete ncbi-entrez-direct-14.0.20201030+dfsg/index-extras:231:osname=`uname -s | sed -e 's/_NT-.*$/_NT/; s/^MINGW[0-9]*/CYGWIN/'` ncbi-entrez-direct-14.0.20201030+dfsg/index-extras-232-if [ "$osname" = "CYGWIN_NT" -a -x /bin/cygpath ] ncbi-entrez-direct-14.0.20201030+dfsg/index-extras-233-then ncbi-entrez-direct-14.0.20201030+dfsg/index-extras:234: target=`cygpath -w "$target"` ncbi-entrez-direct-14.0.20201030+dfsg/index-extras-235-fi ############################################## ncbi-entrez-direct-14.0.20201030+dfsg/index-extras-246-target="$WORKING/Postings" ncbi-entrez-direct-14.0.20201030+dfsg/index-extras:247:osname=`uname -s | sed -e 's/_NT-.*$/_NT/; s/^MINGW[0-9]*/CYGWIN/'` ncbi-entrez-direct-14.0.20201030+dfsg/index-extras-248-if [ "$osname" = "CYGWIN_NT" -a -x /bin/cygpath ] ncbi-entrez-direct-14.0.20201030+dfsg/index-extras-249-then ncbi-entrez-direct-14.0.20201030+dfsg/index-extras:250: target=`cygpath -w "$target"` ncbi-entrez-direct-14.0.20201030+dfsg/index-extras-251-fi ############################################## ncbi-entrez-direct-14.0.20201030+dfsg/pm-merge-15- ncbi-entrez-direct-14.0.20201030+dfsg/pm-merge:16:osname=`uname -s | sed -e 's/_NT-.*$/_NT/; s/^MINGW[0-9]*/CYGWIN/'` ncbi-entrez-direct-14.0.20201030+dfsg/pm-merge-17-if [ "$osname" = "CYGWIN_NT" -a -x /bin/cygpath ] ncbi-entrez-direct-14.0.20201030+dfsg/pm-merge-18-then ncbi-entrez-direct-14.0.20201030+dfsg/pm-merge:19: target=`cygpath -w "$target"` ncbi-entrez-direct-14.0.20201030+dfsg/pm-merge-20-fi ############################################## ncbi-entrez-direct-14.0.20201030+dfsg/eproxy-2-PERL="perl" ncbi-entrez-direct-14.0.20201030+dfsg/eproxy:3:dir=`dirname "$0"` ncbi-entrez-direct-14.0.20201030+dfsg/eproxy-4-case "`uname -s`" in ############################################## ncbi-entrez-direct-14.0.20201030+dfsg/eproxy-7- if perl -e 'exit $^O !~ /^MSWin/'; then ncbi-entrez-direct-14.0.20201030+dfsg/eproxy:8: dir=`cygpath -w "$dir"` ncbi-entrez-direct-14.0.20201030+dfsg/eproxy-9- fi ############################################## ncbi-entrez-direct-14.0.20201030+dfsg/eblast-2-PERL="perl" ncbi-entrez-direct-14.0.20201030+dfsg/eblast:3:dir=`dirname "$0"` ncbi-entrez-direct-14.0.20201030+dfsg/eblast-4-case "`uname -s`" in ############################################## ncbi-entrez-direct-14.0.20201030+dfsg/eblast-7- if perl -e 'exit $^O !~ /^MSWin/'; then ncbi-entrez-direct-14.0.20201030+dfsg/eblast:8: dir=`cygpath -w "$dir"` ncbi-entrez-direct-14.0.20201030+dfsg/eblast-9- fi ############################################## ncbi-entrez-direct-14.0.20201030+dfsg/ecitmatch-2-PERL="perl" ncbi-entrez-direct-14.0.20201030+dfsg/ecitmatch:3:dir=`dirname "$0"` ncbi-entrez-direct-14.0.20201030+dfsg/ecitmatch-4-case "`uname -s`" in ############################################## ncbi-entrez-direct-14.0.20201030+dfsg/ecitmatch-7- if perl -e 'exit $^O !~ /^MSWin/'; then ncbi-entrez-direct-14.0.20201030+dfsg/ecitmatch:8: dir=`cygpath -w "$dir"` ncbi-entrez-direct-14.0.20201030+dfsg/ecitmatch-9- fi ############################################## ncbi-entrez-direct-14.0.20201030+dfsg/test-pubmed-index-28- fi ncbi-entrez-direct-14.0.20201030+dfsg/test-pubmed-index:29: res=`phrase-search -exact "$ttl"` ncbi-entrez-direct-14.0.20201030+dfsg/test-pubmed-index-30- report="1" ############################################## ncbi-entrez-direct-14.0.20201030+dfsg/test-pubmed-index-35- fi ncbi-entrez-direct-14.0.20201030+dfsg/test-pubmed-index:36: num=`echo "$res" | wc -l | tr -d '[:space:]'` ncbi-entrez-direct-14.0.20201030+dfsg/test-pubmed-index-37- echo "$res" | ############################################## ncbi-entrez-direct-14.0.20201030+dfsg/xplore-71- ncbi-entrez-direct-14.0.20201030+dfsg/xplore:72:dir=`dirname "$0"` ncbi-entrez-direct-14.0.20201030+dfsg/xplore-73-case "`uname -s`" in ############################################## ncbi-entrez-direct-14.0.20201030+dfsg/xplore-76- if perl -e 'exit $^O !~ /^MSWin/'; then ncbi-entrez-direct-14.0.20201030+dfsg/xplore:77: dir=`cygpath -w "$dir"` ncbi-entrez-direct-14.0.20201030+dfsg/xplore-78- fi ############################################## ncbi-entrez-direct-14.0.20201030+dfsg/sort-uniq-count-4-then ncbi-entrez-direct-14.0.20201030+dfsg/sort-uniq-count:5: flags=`echo " $*" | sed 's/[^bfinrs]//g'` ncbi-entrez-direct-14.0.20201030+dfsg/sort-uniq-count-6- if [ -z "$flags" ] ############################################## ncbi-entrez-direct-14.0.20201030+dfsg/index-pubmed-103- ncbi-entrez-direct-14.0.20201030+dfsg/index-pubmed:104:osname=`uname -s | sed -e 's/_NT-.*$/_NT/; s/^MINGW[0-9]*/CYGWIN/'` ncbi-entrez-direct-14.0.20201030+dfsg/index-pubmed-105- ############################################## ncbi-entrez-direct-14.0.20201030+dfsg/fetch-pubmed-60- ncbi-entrez-direct-14.0.20201030+dfsg/fetch-pubmed:61:osname=`uname -s | sed -e 's/_NT-.*$/_NT/; s/^MINGW[0-9]*/CYGWIN/'` ncbi-entrez-direct-14.0.20201030+dfsg/fetch-pubmed-62-if [ "$osname" = "CYGWIN_NT" -a -x /bin/cygpath ] ncbi-entrez-direct-14.0.20201030+dfsg/fetch-pubmed-63-then ncbi-entrez-direct-14.0.20201030+dfsg/fetch-pubmed:64: target=`cygpath -w "$target"` ncbi-entrez-direct-14.0.20201030+dfsg/fetch-pubmed-65-fi ############################################## ncbi-entrez-direct-14.0.20201030+dfsg/archive-pubmed-72- ncbi-entrez-direct-14.0.20201030+dfsg/archive-pubmed:73:osname=`uname -s | sed -e 's/_NT-.*$/_NT/; s/^MINGW[0-9]*/CYGWIN/'` ncbi-entrez-direct-14.0.20201030+dfsg/archive-pubmed-74- ############################################## ncbi-entrez-direct-14.0.20201030+dfsg/phrase-search-648- ncbi-entrez-direct-14.0.20201030+dfsg/phrase-search:649:osname=`uname -s | sed -e 's/_NT-.*$/_NT/; s/^MINGW[0-9]*/CYGWIN/'` ncbi-entrez-direct-14.0.20201030+dfsg/phrase-search-650-if [ "$osname" = "CYGWIN_NT" -a -x /bin/cygpath ] ncbi-entrez-direct-14.0.20201030+dfsg/phrase-search-651-then ncbi-entrez-direct-14.0.20201030+dfsg/phrase-search:652: target=`cygpath -w "$target"` ncbi-entrez-direct-14.0.20201030+dfsg/phrase-search-653-fi ############################################## ncbi-entrez-direct-14.0.20201030+dfsg/bt-link-38- ncbi-entrez-direct-14.0.20201030+dfsg/bt-link:39:dir=`dirname "$0"` ncbi-entrez-direct-14.0.20201030+dfsg/bt-link-40-case "`uname -s`" in ############################################## ncbi-entrez-direct-14.0.20201030+dfsg/bt-link-43- if perl -e 'exit $^O !~ /^MSWin/'; then ncbi-entrez-direct-14.0.20201030+dfsg/bt-link:44: dir=`cygpath -w "$dir"` ncbi-entrez-direct-14.0.20201030+dfsg/bt-link-45- fi ############################################## ncbi-entrez-direct-14.0.20201030+dfsg/edirect.pl-7323-} elsif ( $fnc eq "-address" ) { ncbi-entrez-direct-14.0.20201030+dfsg/edirect.pl:7324: eaddr (); ncbi-entrez-direct-14.0.20201030+dfsg/edirect.pl-7325-} elsif ( $fnc eq "-blast" ) { ############################################## ncbi-entrez-direct-14.0.20201030+dfsg/asp-ls-2-PERL="perl" ncbi-entrez-direct-14.0.20201030+dfsg/asp-ls:3:dir=`dirname "$0"` ncbi-entrez-direct-14.0.20201030+dfsg/asp-ls-4-case "`uname -s`" in ############################################## ncbi-entrez-direct-14.0.20201030+dfsg/asp-ls-7- if perl -e 'exit $^O !~ /^MSWin/'; then ncbi-entrez-direct-14.0.20201030+dfsg/asp-ls:8: dir=`cygpath -w "$dir"` ncbi-entrez-direct-14.0.20201030+dfsg/asp-ls-9- fi ############################################## ncbi-entrez-direct-14.0.20201030+dfsg/pm-stash-13- ncbi-entrez-direct-14.0.20201030+dfsg/pm-stash:14:osname=`uname -s | sed -e 's/_NT-.*$/_NT/; s/^MINGW[0-9]*/CYGWIN/'` ncbi-entrez-direct-14.0.20201030+dfsg/pm-stash-15-if [ "$osname" = "CYGWIN_NT" -a -x /bin/cygpath ] ncbi-entrez-direct-14.0.20201030+dfsg/pm-stash-16-then ncbi-entrez-direct-14.0.20201030+dfsg/pm-stash:17: archive=`cygpath -w "$archive"` ncbi-entrez-direct-14.0.20201030+dfsg/pm-stash-18-fi ############################################## ncbi-entrez-direct-14.0.20201030+dfsg/enotify-2-PERL="perl" ncbi-entrez-direct-14.0.20201030+dfsg/enotify:3:dir=`dirname "$0"` ncbi-entrez-direct-14.0.20201030+dfsg/enotify-4-case "`uname -s`" in ############################################## ncbi-entrez-direct-14.0.20201030+dfsg/enotify-7- if perl -e 'exit $^O !~ /^MSWin/'; then ncbi-entrez-direct-14.0.20201030+dfsg/enotify:8: dir=`cygpath -w "$dir"` ncbi-entrez-direct-14.0.20201030+dfsg/enotify-9- fi ############################################## ncbi-entrez-direct-14.0.20201030+dfsg/setup-deps.pl-62- $ll->get; ncbi-entrez-direct-14.0.20201030+dfsg/setup-deps.pl:63: system('mkdir', '-p', "$root/aux/lib/perl5/local"); ncbi-entrez-direct-14.0.20201030+dfsg/setup-deps.pl-64- system('cp', $ll->distribution->dir . "/lib/local/lib.pm",