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grep rough audit - static analysis tool
v2.8 written by @Wireghoul
=================================[justanotherhacker.com]===
r-cran-ape-5.4-1/vignettes/MoranI.Rnw-84- 1/d_{ij}$, where $d_{ij}$ are distances measured on a tree.
r-cran-ape-5.4-1/vignettes/MoranI.Rnw:85:\item With taxonomic levels where $w_{ij} = 1$ if species $i$ and $j$
r-cran-ape-5.4-1/vignettes/MoranI.Rnw-86- belong to the same group, 0 otherwise.
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r-cran-ape-5.4-1/R/summary.phylo.R-131-
r-cran-ape-5.4-1/R/summary.phylo.R:132:`$.multiPhylo` <- function(x, name) x[[name]]
r-cran-ape-5.4-1/R/summary.phylo.R-133-
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r-cran-ape-5.4-1/R/summary.phylo.R-290-
r-cran-ape-5.4-1/R/summary.phylo.R:291:`$<-.multiPhylo` <- function(x, ..., value)
r-cran-ape-5.4-1/R/summary.phylo.R-292-{
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r-cran-ape-5.4-1/inst/doc/MoranI.Rnw-84- 1/d_{ij}$, where $d_{ij}$ are distances measured on a tree.
r-cran-ape-5.4-1/inst/doc/MoranI.Rnw:85:\item With taxonomic levels where $w_{ij} = 1$ if species $i$ and $j$
r-cran-ape-5.4-1/inst/doc/MoranI.Rnw-86- belong to the same group, 0 otherwise.
##############################################
r-cran-ape-5.4-1/debian/tests/run-unit-test-2-oname=ape
r-cran-ape-5.4-1/debian/tests/run-unit-test:3:pkg=r-cran-`echo $oname | tr '[A-Z]' '[a-z]'`
r-cran-ape-5.4-1/debian/tests/run-unit-test-4-
r-cran-ape-5.4-1/debian/tests/run-unit-test-5-if [ "$AUTOPKGTEST_TMP" = "" ] ; then
r-cran-ape-5.4-1/debian/tests/run-unit-test:6: AUTOPKGTEST_TMP=`mktemp -d /tmp/${pkg}-test.XXXXXX`
r-cran-ape-5.4-1/debian/tests/run-unit-test-7- trap "rm -rf $AUTOPKGTEST_TMP" 0 INT QUIT ABRT PIPE TERM
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r-cran-ape-5.4-1/debian/tests/run-unit-test-13-for rnw in `ls *.[rR]nw` ; do
r-cran-ape-5.4-1/debian/tests/run-unit-test:14:rfile=`echo $rnw | sed 's/\.[rR]nw/.R/'`
r-cran-ape-5.4-1/debian/tests/run-unit-test-15-R --no-save <<EOT