===========================================================
                                      .___ __  __   
          _________________  __ __  __| _/|__|/  |_ 
         / ___\_` __ \__  \ |  |  \/ __ | | \\_  __\
        / /_/  >  | \// __ \|  |  / /_/ | |  ||  |  
        \___  /|__|  (____  /____/\____ | |__||__|  
       /_____/            \/           \/           
              grep rough audit - static analysis tool
                  v2.8 written by @Wireghoul
=================================[justanotherhacker.com]===
r-cran-haplo.stats-1.8.6/R/plot.seqhap.q-68-  ylim.indx <- match('ylim', names(dots))
r-cran-haplo.stats-1.8.6/R/plot.seqhap.q:69:  ylim.user <- if(!is.na(ylim.indx)) eval(dots[ylim.indx]$ylim) else NULL
r-cran-haplo.stats-1.8.6/R/plot.seqhap.q-70-
##############################################
r-cran-haplo.stats-1.8.6/inst/doc/manualHaploStats.rnwsave-1855-pairs of haplotypes.  Hence, the number of possible haplotype 
r-cran-haplo.stats-1.8.6/inst/doc/manualHaploStats.rnwsave:1856:pairs can be expressed as $2^{x}$, where $x = H-1$, if  $H$\ (the number of 
r-cran-haplo.stats-1.8.6/inst/doc/manualHaploStats.rnwsave-1857-heterozygous loci) is at least 2, otherwise $x = 0$.
##############################################
r-cran-haplo.stats-1.8.6/inst/doc/manualHaploStats.rnwsave-1911-
r-cran-haplo.stats-1.8.6/inst/doc/manualHaploStats.rnwsave:1912:\noindent where again  $x = H-1$\ if H is at least 2, otherwise x = 0.  This special 
r-cran-haplo.stats-1.8.6/inst/doc/manualHaploStats.rnwsave-1913-case can be represented by our more general genotype counting functions as 
##############################################
r-cran-haplo.stats-1.8.6/debian/tests/run-unit-test-22-if [ "$AUTOPKGTEST_TMP" = "" ] ; then
r-cran-haplo.stats-1.8.6/debian/tests/run-unit-test:23:  AUTOPKGTEST_TMP=`mktemp -d /tmp/${pkg}-test.XXXXXX`
r-cran-haplo.stats-1.8.6/debian/tests/run-unit-test-24-fi
##############################################
r-cran-haplo.stats-1.8.6/debian/tests/run-unit-test-27-gunzip *.gz
r-cran-haplo.stats-1.8.6/debian/tests/run-unit-test:28:for htest in `ls *.R | sed 's/\.R$//'` ; do
r-cran-haplo.stats-1.8.6/debian/tests/run-unit-test-29-   LC_ALL=C R --no-save < ${htest}.R 2>&1 | tee > ${htest}.Rout